; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

IVF0002249 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0002249
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Descriptiontranscription initiation factor TFIID subunit 12
Genome locationchr09:8747158..8749482
RNA-Seq ExpressionIVF0002249
SyntenyIVF0002249
Gene Ontology termsGO:0006413 - translational initiation (biological process)
GO:0051123 - RNA polymerase II preinitiation complex assembly (biological process)
GO:0000124 - SAGA complex (cellular component)
GO:0005669 - transcription factor TFIID complex (cellular component)
GO:0046695 - SLIK (SAGA-like) complex (cellular component)
GO:0003677 - DNA binding (molecular function)
GO:0003743 - translation initiation factor activity (molecular function)
GO:0017025 - TBP-class protein binding (molecular function)
GO:0046982 - protein heterodimerization activity (molecular function)
InterPro domainsIPR003228 - Transcription initiation factor TFIID subunit 12 domain
IPR009072 - Histone-fold
IPR037794 - Transcription initiation factor TFIID subunit 12


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0025267.1 transcription initiation factor TFIID subunit 12 [Cucumis melo var. makuwa]1.03e-17088.14Show/hide
Query:  LHRPVQSSLRPPSTPNSASQSFQGHGLLRVPSTSSSSSSLPNTSQGMQPTNQPWLPSSSQGKPPLPTPSYRPQANSS---------------------QQ
        LHRPVQSSLRPPSTPNSASQSFQGHGLLRVPSTSS SSSLPNTSQGMQPTNQPWLPSSSQGKPPLPTPSYRPQANSS                     QQ
Subjt:  LHRPVQSSLRPPSTPNSASQSFQGHGLLRVPSTSSSSSSLPNTSQGMQPTNQPWLPSSSQGKPPLPTPSYRPQANSS---------------------QQ

Query:  QISSAPQQQPAQSHQPQEHFAQQFQPSRSSQGLPHQQQAARAQRPANPKASPLPPAQTNNAQASAPSRSITTEMEEPCSRILSKRSIGKLVNQINPSERL
        QISSAPQQQPAQSHQPQEHFAQQFQPSRSSQGLPHQQQAARAQ PANPKASPLPPAQTNNAQASAPSR+IT EMEEPCSRILSKRSIGKLVNQI+PSERL
Subjt:  QISSAPQQQPAQSHQPQEHFAQQFQPSRSSQGLPHQQQAARAQRPANPKASPLPPAQTNNAQASAPSRSITTEMEEPCSRILSKRSIGKLVNQINPSERL

Query:  DPEVEDILVDLAEEFVESITTFGCSLAKHRKSTTLEAKDILLHLEKNWNLTLPGFGSDEIKIFRKPLINDTHRERLA----------MASTRSSAGQAAG
        DPEVEDILVDLAEEFVESITTFGCSLAKHRKSTTLEAKDILLHLEKNWNLTLPGFGSDEIKIFRKPL NDTHRERLA          MASTRSSAGQAAG
Subjt:  DPEVEDILVDLAEEFVESITTFGCSLAKHRKSTTLEAKDILLHLEKNWNLTLPGFGSDEIKIFRKPLINDTHRERLA----------MASTRSSAGQAAG

Query:  NTKSSLTKTPAV
        NTKSSLTKTPAV
Subjt:  NTKSSLTKTPAV

TYK07401.1 transcription initiation factor TFIID subunit 12 [Cucumis melo var. makuwa]2.36e-16687.18Show/hide
Query:  LHRPVQSSLRPPSTPNSASQSFQGHGLLRVPSTSSSSSSLPNTSQGMQPTNQPWLPSSSQGKPPLPTPSYRPQANSS---------------------QQ
        LHRPVQSSLRPPSTPNSASQSFQGHGLLRVPSTSS SSSLPNTSQGMQPTNQPWLPSSSQGKPPLPTPSYRPQANSS                     QQ
Subjt:  LHRPVQSSLRPPSTPNSASQSFQGHGLLRVPSTSSSSSSLPNTSQGMQPTNQPWLPSSSQGKPPLPTPSYRPQANSS---------------------QQ

Query:  QISSAPQQQPAQSHQPQEHFAQQFQPSRSSQGLPHQQQAARAQRPANPKASPLPPAQTNNAQASAPSRSITTEMEEPCSRILSKRSIGKLVNQINPSERL
        QISSAPQQQPAQSHQPQEHFAQQFQPSRSSQGLPHQQQAARAQ PANPKASPLPPAQTNNAQASAPSR+IT EMEEPCSRILSKRSIGKL   I+PSERL
Subjt:  QISSAPQQQPAQSHQPQEHFAQQFQPSRSSQGLPHQQQAARAQRPANPKASPLPPAQTNNAQASAPSRSITTEMEEPCSRILSKRSIGKLVNQINPSERL

Query:  DPEVEDILVDLAEEFVESITTFGCSLAKHRKSTTLEAKDILLHLEKNWNLTLPGFGSDEIKIFRKPLINDTHRERLA----------MASTRSSAGQAAG
        DPEVEDILVDLAEEFVESITTFGCSLAKHRKSTTLEAKDILLHLEKNWNLTLPGFGSDEIKIFRKPL NDTHRERLA          MASTRSSAGQAAG
Subjt:  DPEVEDILVDLAEEFVESITTFGCSLAKHRKSTTLEAKDILLHLEKNWNLTLPGFGSDEIKIFRKPLINDTHRERLA----------MASTRSSAGQAAG

Query:  NTKSSLTKTPAV
        NTKSSLTKTPAV
Subjt:  NTKSSLTKTPAV

XP_008462670.1 PREDICTED: transcription initiation factor TFIID subunit 12 [Cucumis melo]4.42e-17188.14Show/hide
Query:  LHRPVQSSLRPPSTPNSASQSFQGHGLLRVPSTSSSSSSLPNTSQGMQPTNQPWLPSSSQGKPPLPTPSYRPQANSS---------------------QQ
        LHRPVQSSLRPPSTPNSASQSFQGHGLLRVPSTSS SSSLPNTSQGMQPTNQPWLPSSSQGKPPLPTPSYRPQANSS                     QQ
Subjt:  LHRPVQSSLRPPSTPNSASQSFQGHGLLRVPSTSSSSSSLPNTSQGMQPTNQPWLPSSSQGKPPLPTPSYRPQANSS---------------------QQ

Query:  QISSAPQQQPAQSHQPQEHFAQQFQPSRSSQGLPHQQQAARAQRPANPKASPLPPAQTNNAQASAPSRSITTEMEEPCSRILSKRSIGKLVNQINPSERL
        QISSAPQQQPAQSHQPQEHFAQQFQPSRSSQGLPHQQQAARAQ PANPKASPLPPAQTNNAQASAPSR+IT EMEEPCSRILSKRSIGKLVNQI+PSERL
Subjt:  QISSAPQQQPAQSHQPQEHFAQQFQPSRSSQGLPHQQQAARAQRPANPKASPLPPAQTNNAQASAPSRSITTEMEEPCSRILSKRSIGKLVNQINPSERL

Query:  DPEVEDILVDLAEEFVESITTFGCSLAKHRKSTTLEAKDILLHLEKNWNLTLPGFGSDEIKIFRKPLINDTHRERLA----------MASTRSSAGQAAG
        DPEVEDILVDLAEEFVESITTFGCSLAKHRKSTTLEAKDILLHLEKNWNLTLPGFGSDEIKIFRKPL NDTHRERLA          MASTRSSAGQAAG
Subjt:  DPEVEDILVDLAEEFVESITTFGCSLAKHRKSTTLEAKDILLHLEKNWNLTLPGFGSDEIKIFRKPLINDTHRERLA----------MASTRSSAGQAAG

Query:  NTKSSLTKTPAV
        NTKSSLTKTPAV
Subjt:  NTKSSLTKTPAV

XP_008467013.2 PREDICTED: LOW QUALITY PROTEIN: transcription initiation factor TFIID subunit 12-like, partial [Cucumis melo]1.45e-16988.35Show/hide
Query:  PVQSSLRPPSTPNSASQSFQGHGLLRVPSTSSSSSSLPNTSQGMQPTNQPWLPSSSQGKPPLPTPSYRPQANSS---------------------QQQIS
        PVQSSLR PSTPNSASQSF  HGLLRVPSTSS SSSLPNTSQGMQPTNQPWLPSSSQGKPPLPTPSYRPQANSS                     QQQIS
Subjt:  PVQSSLRPPSTPNSASQSFQGHGLLRVPSTSSSSSSLPNTSQGMQPTNQPWLPSSSQGKPPLPTPSYRPQANSS---------------------QQQIS

Query:  SAPQQQPAQSHQPQEHFAQQFQPSRSSQGLPHQQQAARAQRPANPKASPLPPAQTNNAQASAPSRSITTEMEEPCSRILSKRSIGKLVNQINPSERLDPE
        SAPQQQPAQSHQPQEHFAQQFQPSRS+QGLPHQQQAARAQRPANPKASPLPPAQTNNAQASAPSRSITTEMEEPCSRILSKRSIGKLVNQINPSERLDPE
Subjt:  SAPQQQPAQSHQPQEHFAQQFQPSRSSQGLPHQQQAARAQRPANPKASPLPPAQTNNAQASAPSRSITTEMEEPCSRILSKRSIGKLVNQINPSERLDPE

Query:  VEDILVDLAEEFVESITTFGCSLAKHRKSTTLEAKDILLHLEKNWNLTLPGFGSDEIKIFRKPLINDTHRERLA----------MASTRSSAGQAAGNTK
        VEDILVDLAEEFVESITTFGCSLAKHRKSTTLEAKDILLHLEKNWNLTLPGFGSDEIKIFRKPLINDTHRERLA          MASTRSSAGQAAGNTK
Subjt:  VEDILVDLAEEFVESITTFGCSLAKHRKSTTLEAKDILLHLEKNWNLTLPGFGSDEIKIFRKPLINDTHRERLA----------MASTRSSAGQAAGNTK

Query:  SSLTKTPAV
        SSLTKTPAV
Subjt:  SSLTKTPAV

XP_011657695.1 transcription initiation factor TFIID subunit 12 [Cucumis sativus]1.72e-16485.58Show/hide
Query:  LHRPVQSSLRPPSTPNSASQSFQGHGLLRVPSTSSSSSSLPNTSQGMQPTNQPWLPSSSQGKPPLPTPSYRPQANS---------------------SQQ
        LHRPVQSSLRPPSTPNSASQ+FQGHGLLRVPSTSS SSSLPNTSQGMQPTNQPWLPSSSQGKPPLPTPSYRPQANS                      QQ
Subjt:  LHRPVQSSLRPPSTPNSASQSFQGHGLLRVPSTSSSSSSLPNTSQGMQPTNQPWLPSSSQGKPPLPTPSYRPQANS---------------------SQQ

Query:  QISSAPQQQPAQSHQPQEHFAQQFQPSRSSQGLPHQQQAARAQRPANPKASPLPPAQTNNAQASAPSRSITTEMEEPCSRILSKRSIGKLVNQINPSERL
        QISSAPQQQPAQSHQPQEHFAQQFQ SRSSQGLPHQQQAARAQ PANPKASPL P QTNNAQA  PSR+IT EMEEPCSRILSKRSIGKLVNQI+PSERL
Subjt:  QISSAPQQQPAQSHQPQEHFAQQFQPSRSSQGLPHQQQAARAQRPANPKASPLPPAQTNNAQASAPSRSITTEMEEPCSRILSKRSIGKLVNQINPSERL

Query:  DPEVEDILVDLAEEFVESITTFGCSLAKHRKSTTLEAKDILLHLEKNWNLTLPGFGSDEIKIFRKPLINDTHRERLA----------MASTRSSAGQAAG
        DPEVEDILVDLAEEFVESITTFGCSLAKHRKSTTLEAKDILLHLEKNWNLTLPGFGSDEIKIFRKPL NDTHRER+A          MASTRSSAGQAAG
Subjt:  DPEVEDILVDLAEEFVESITTFGCSLAKHRKSTTLEAKDILLHLEKNWNLTLPGFGSDEIKIFRKPLINDTHRERLA----------MASTRSSAGQAAG

Query:  NTKSSLTKTPAV
        NTKSSLTKTPAV
Subjt:  NTKSSLTKTPAV

TrEMBL top hitse value%identityAlignment
A0A0A0KEX0 TFIID_20kDa domain-containing protein5.1e-13185.58Show/hide
Query:  LHRPVQSSLRPPSTPNSASQSFQGHGLLRVPSTSSSSSSLPNTSQGMQPTNQPWLPSSSQGKPPLPTPSYRPQAN---------------------SSQQ
        LHRPVQSSLRPPSTPNSASQ+FQGHGLLRVPSTSS SSSLPNTSQGMQPTNQPWLPSSSQGKPPLPTPSYRPQAN                     S QQ
Subjt:  LHRPVQSSLRPPSTPNSASQSFQGHGLLRVPSTSSSSSSLPNTSQGMQPTNQPWLPSSSQGKPPLPTPSYRPQAN---------------------SSQQ

Query:  QISSAPQQQPAQSHQPQEHFAQQFQPSRSSQGLPHQQQAARAQRPANPKASPLPPAQTNNAQASAPSRSITTEMEEPCSRILSKRSIGKLVNQINPSERL
        QISSAPQQQPAQSHQPQEHFAQQFQ SRSSQGLPHQQQAARAQ PANPKASPL P QTNNAQA  PSR+IT EMEEPCSRILSKRSIGKLVNQI+PSERL
Subjt:  QISSAPQQQPAQSHQPQEHFAQQFQPSRSSQGLPHQQQAARAQRPANPKASPLPPAQTNNAQASAPSRSITTEMEEPCSRILSKRSIGKLVNQINPSERL

Query:  DPEVEDILVDLAEEFVESITTFGCSLAKHRKSTTLEAKDILLHLEKNWNLTLPGFGSDEIKIFRKPLINDTHRERLA----------MASTRSSAGQAAG
        DPEVEDILVDLAEEFVESITTFGCSLAKHRKSTTLEAKDILLHLEKNWNLTLPGFGSDEIKIFRKPL NDTHRER+A          MASTRSSAGQAAG
Subjt:  DPEVEDILVDLAEEFVESITTFGCSLAKHRKSTTLEAKDILLHLEKNWNLTLPGFGSDEIKIFRKPLINDTHRERLA----------MASTRSSAGQAAG

Query:  NTKSSLTKTPAV
        NTKSSLTKTPAV
Subjt:  NTKSSLTKTPAV

A0A1S3CHH3 transcription initiation factor TFIID subunit 129.0e-13688.14Show/hide
Query:  LHRPVQSSLRPPSTPNSASQSFQGHGLLRVPSTSSSSSSLPNTSQGMQPTNQPWLPSSSQGKPPLPTPSYRPQANSS---------------------QQ
        LHRPVQSSLRPPSTPNSASQSFQGHGLLRVPSTSS SSSLPNTSQGMQPTNQPWLPSSSQGKPPLPTPSYRPQANSS                     QQ
Subjt:  LHRPVQSSLRPPSTPNSASQSFQGHGLLRVPSTSSSSSSLPNTSQGMQPTNQPWLPSSSQGKPPLPTPSYRPQANSS---------------------QQ

Query:  QISSAPQQQPAQSHQPQEHFAQQFQPSRSSQGLPHQQQAARAQRPANPKASPLPPAQTNNAQASAPSRSITTEMEEPCSRILSKRSIGKLVNQINPSERL
        QISSAPQQQPAQSHQPQEHFAQQFQPSRSSQGLPHQQQAARAQ PANPKASPLPPAQTNNAQASAPSR+IT EMEEPCSRILSKRSIGKLVNQI+PSERL
Subjt:  QISSAPQQQPAQSHQPQEHFAQQFQPSRSSQGLPHQQQAARAQRPANPKASPLPPAQTNNAQASAPSRSITTEMEEPCSRILSKRSIGKLVNQINPSERL

Query:  DPEVEDILVDLAEEFVESITTFGCSLAKHRKSTTLEAKDILLHLEKNWNLTLPGFGSDEIKIFRKPLINDTHRERLA----------MASTRSSAGQAAG
        DPEVEDILVDLAEEFVESITTFGCSLAKHRKSTTLEAKDILLHLEKNWNLTLPGFGSDEIKIFRKPL NDTHRERLA          MASTRSSAGQAAG
Subjt:  DPEVEDILVDLAEEFVESITTFGCSLAKHRKSTTLEAKDILLHLEKNWNLTLPGFGSDEIKIFRKPLINDTHRERLA----------MASTRSSAGQAAG

Query:  NTKSSLTKTPAV
        NTKSSLTKTPAV
Subjt:  NTKSSLTKTPAV

A0A1S3CTU1 LOW QUALITY PROTEIN: transcription initiation factor TFIID subunit 12-like1.6e-13288.35Show/hide
Query:  PVQSSLRPPSTPNSASQSFQGHGLLRVPSTSSSSSSLPNTSQGMQPTNQPWLPSSSQGKPPLPTPSYRPQANSS---------------------QQQIS
        PVQSSLR PSTPNSASQSF  HGLLRVPSTSS SSSLPNTSQGMQPTNQPWLPSSSQGKPPLPTPSYRPQANSS                     QQQIS
Subjt:  PVQSSLRPPSTPNSASQSFQGHGLLRVPSTSSSSSSLPNTSQGMQPTNQPWLPSSSQGKPPLPTPSYRPQANSS---------------------QQQIS

Query:  SAPQQQPAQSHQPQEHFAQQFQPSRSSQGLPHQQQAARAQRPANPKASPLPPAQTNNAQASAPSRSITTEMEEPCSRILSKRSIGKLVNQINPSERLDPE
        SAPQQQPAQSHQPQEHFAQQFQPSRS+QGLPHQQQAARAQRPANPKASPLPPAQTNNAQASAPSRSITTEMEEPCSRILSKRSIGKLVNQINPSERLDPE
Subjt:  SAPQQQPAQSHQPQEHFAQQFQPSRSSQGLPHQQQAARAQRPANPKASPLPPAQTNNAQASAPSRSITTEMEEPCSRILSKRSIGKLVNQINPSERLDPE

Query:  VEDILVDLAEEFVESITTFGCSLAKHRKSTTLEAKDILLHLEKNWNLTLPGFGSDEIKIFRKPLINDTHRERLA----------MASTRSSAGQAAGNTK
        VEDILVDLAEEFVESITTFGCSLAKHRKSTTLEAKDILLHLEKNWNLTLPGFGSDEIKIFRKPLINDTHRERLA          MASTRSSAGQAAGNTK
Subjt:  VEDILVDLAEEFVESITTFGCSLAKHRKSTTLEAKDILLHLEKNWNLTLPGFGSDEIKIFRKPLINDTHRERLA----------MASTRSSAGQAAGNTK

Query:  SSLTKTPAV
        SSLTKTPAV
Subjt:  SSLTKTPAV

A0A5A7SKM4 Transcription initiation factor TFIID subunit 129.0e-13688.14Show/hide
Query:  LHRPVQSSLRPPSTPNSASQSFQGHGLLRVPSTSSSSSSLPNTSQGMQPTNQPWLPSSSQGKPPLPTPSYRPQANSS---------------------QQ
        LHRPVQSSLRPPSTPNSASQSFQGHGLLRVPSTSS SSSLPNTSQGMQPTNQPWLPSSSQGKPPLPTPSYRPQANSS                     QQ
Subjt:  LHRPVQSSLRPPSTPNSASQSFQGHGLLRVPSTSSSSSSLPNTSQGMQPTNQPWLPSSSQGKPPLPTPSYRPQANSS---------------------QQ

Query:  QISSAPQQQPAQSHQPQEHFAQQFQPSRSSQGLPHQQQAARAQRPANPKASPLPPAQTNNAQASAPSRSITTEMEEPCSRILSKRSIGKLVNQINPSERL
        QISSAPQQQPAQSHQPQEHFAQQFQPSRSSQGLPHQQQAARAQ PANPKASPLPPAQTNNAQASAPSR+IT EMEEPCSRILSKRSIGKLVNQI+PSERL
Subjt:  QISSAPQQQPAQSHQPQEHFAQQFQPSRSSQGLPHQQQAARAQRPANPKASPLPPAQTNNAQASAPSRSITTEMEEPCSRILSKRSIGKLVNQINPSERL

Query:  DPEVEDILVDLAEEFVESITTFGCSLAKHRKSTTLEAKDILLHLEKNWNLTLPGFGSDEIKIFRKPLINDTHRERLA----------MASTRSSAGQAAG
        DPEVEDILVDLAEEFVESITTFGCSLAKHRKSTTLEAKDILLHLEKNWNLTLPGFGSDEIKIFRKPL NDTHRERLA          MASTRSSAGQAAG
Subjt:  DPEVEDILVDLAEEFVESITTFGCSLAKHRKSTTLEAKDILLHLEKNWNLTLPGFGSDEIKIFRKPLINDTHRERLA----------MASTRSSAGQAAG

Query:  NTKSSLTKTPAV
        NTKSSLTKTPAV
Subjt:  NTKSSLTKTPAV

A0A5D3C687 Transcription initiation factor TFIID subunit 122.1e-13287.18Show/hide
Query:  LHRPVQSSLRPPSTPNSASQSFQGHGLLRVPSTSSSSSSLPNTSQGMQPTNQPWLPSSSQGKPPLPTPSYRPQANSS---------------------QQ
        LHRPVQSSLRPPSTPNSASQSFQGHGLLRVPSTSS SSSLPNTSQGMQPTNQPWLPSSSQGKPPLPTPSYRPQANSS                     QQ
Subjt:  LHRPVQSSLRPPSTPNSASQSFQGHGLLRVPSTSSSSSSLPNTSQGMQPTNQPWLPSSSQGKPPLPTPSYRPQANSS---------------------QQ

Query:  QISSAPQQQPAQSHQPQEHFAQQFQPSRSSQGLPHQQQAARAQRPANPKASPLPPAQTNNAQASAPSRSITTEMEEPCSRILSKRSIGKLVNQINPSERL
        QISSAPQQQPAQSHQPQEHFAQQFQPSRSSQGLPHQQQAARAQ PANPKASPLPPAQTNNAQASAPSR+IT EMEEPCSRILSKRSIGKL   I+PSERL
Subjt:  QISSAPQQQPAQSHQPQEHFAQQFQPSRSSQGLPHQQQAARAQRPANPKASPLPPAQTNNAQASAPSRSITTEMEEPCSRILSKRSIGKLVNQINPSERL

Query:  DPEVEDILVDLAEEFVESITTFGCSLAKHRKSTTLEAKDILLHLEKNWNLTLPGFGSDEIKIFRKPLINDTHRERLA----------MASTRSSAGQAAG
        DPEVEDILVDLAEEFVESITTFGCSLAKHRKSTTLEAKDILLHLEKNWNLTLPGFGSDEIKIFRKPL NDTHRERLA          MASTRSSAGQAAG
Subjt:  DPEVEDILVDLAEEFVESITTFGCSLAKHRKSTTLEAKDILLHLEKNWNLTLPGFGSDEIKIFRKPLINDTHRERLA----------MASTRSSAGQAAG

Query:  NTKSSLTKTPAV
        NTKSSLTKTPAV
Subjt:  NTKSSLTKTPAV

SwissProt top hitse value%identityAlignment
Q16514 Transcription initiation factor TFIID subunit 126.2e-2545Show/hide
Query:  SRILSKRSIGKLVNQINPSERLDPEVEDILVDLAEEFVESITTFGCSLAKHRKSTTLEAKDILLHLEKNWNLTLPGFGSDEIKIFRKPLINDTHRERLAM
        +++L+K+ +  LV +++P+E+LD +VE++L+ +A++F+ES+ T  C LA+HRKS+TLE KD+ LHLE+ WN+ +PGFGS+EI+ ++K    + H++R+A+
Subjt:  SRILSKRSIGKLVNQINPSERLDPEVEDILVDLAEEFVESITTFGCSLAKHRKSTTLEAKDILLHLEKNWNLTLPGFGSDEIKIFRKPLINDTHRERLAM

Q3T174 Transcription initiation factor TFIID subunit 126.2e-2545Show/hide
Query:  SRILSKRSIGKLVNQINPSERLDPEVEDILVDLAEEFVESITTFGCSLAKHRKSTTLEAKDILLHLEKNWNLTLPGFGSDEIKIFRKPLINDTHRERLAM
        +++L+K+ +  LV +++P+E+LD +VE++L+ +A++F+ES+ T  C LA+HRKS+TLE KD+ LHLE+ WN+ +PGFGS+EI+ ++K    + H++R+A+
Subjt:  SRILSKRSIGKLVNQINPSERLDPEVEDILVDLAEEFVESITTFGCSLAKHRKSTTLEAKDILLHLEKNWNLTLPGFGSDEIKIFRKPLINDTHRERLAM

Q8VE65 Transcription initiation factor TFIID subunit 126.2e-2545Show/hide
Query:  SRILSKRSIGKLVNQINPSERLDPEVEDILVDLAEEFVESITTFGCSLAKHRKSTTLEAKDILLHLEKNWNLTLPGFGSDEIKIFRKPLINDTHRERLAM
        +++L+K+ +  LV +++P+E+LD +VE++L+ +A++F+ES+ T  C LA+HRKS+TLE KD+ LHLE+ WN+ +PGFGS+EI+ ++K    + H++R+A+
Subjt:  SRILSKRSIGKLVNQINPSERLDPEVEDILVDLAEEFVESITTFGCSLAKHRKSTTLEAKDILLHLEKNWNLTLPGFGSDEIKIFRKPLINDTHRERLAM

Q91858 Transcription initiation factor TFIID subunit 122.0e-2337.01Show/hide
Query:  SRSSQGLPHQQQAARAQRPANPKASPL--PPAQTNNAQASAPSRSITTEMEEPCSRILSKRSIGKLVNQINPSERLDPEVEDILVDLAEEFVESITTFGC
        S SS   P     A  Q PA   ++P+   P  T     ++P            +++LSK+ +  LV +++P+E+LD +VE++L+ +A++F+ES+ +  C
Subjt:  SRSSQGLPHQQQAARAQRPANPKASPL--PPAQTNNAQASAPSRSITTEMEEPCSRILSKRSIGKLVNQINPSERLDPEVEDILVDLAEEFVESITTFGC

Query:  SLAKHRKSTTLEAKDILLHLEKNWNLTLPGFGSDEIKIFRKPLINDTHRERLAM
         LA+HRKS TLE KD+ LHLE+ WN+ +PGFGS+EI+ ++K    + H++R+A+
Subjt:  SLAKHRKSTTLEAKDILLHLEKNWNLTLPGFGSDEIKIFRKPLINDTHRERLAM

Q9SR71 Transcription initiation factor TFIID subunit 121.3e-5950.32Show/hide
Query:  RPVQSSLRP---PSTPNSASQSFQGHGLLR-VPSTSSSSSSLPNTSQGMQPTNQPWLPSSSQGKPPLPTPSYRPQANS---------SQQQISSA-----
        RP QSSLRP    ST +  +Q+FQGH L+R  P +S +  S   + Q +Q  NQPWL S+ QGKPPLP PSYRPQ NS          QQ IS++     
Subjt:  RPVQSSLRP---PSTPNSASQSFQGHGLLR-VPSTSSSSSSLPNTSQGMQPTNQPWLPSSSQGKPPLPTPSYRPQANS---------SQQQISSA-----

Query:  -PQQQPAQSHQPQEHFAQQFQPSRSSQGLPHQQQAARAQRPANPK-ASPLPPAQTNNAQASAPSRSITTEMEEPCSRILSKRSIGKLVNQINPSERLDPE
          QQQ  Q HQPQE   Q   P    Q L H  Q  R Q   N K  SP+ P+Q   AQ    +++++ E E    RIL KRSI +L+ QI+PSE+LDPE
Subjt:  -PQQQPAQSHQPQEHFAQQFQPSRSSQGLPHQQQAARAQRPANPK-ASPLPPAQTNNAQASAPSRSITTEMEEPCSRILSKRSIGKLVNQINPSERLDPE

Query:  VEDILVDLAEEFVESITTFGCSLAKHRKSTTLEAKDILLHLEKNWNLTLPGFGSDEIKIFRKPLINDTHRERLA----------MASTRSSAGQAAGNTK
        VEDIL D+AE+FVESITTFGCSLAKHRKS  LEAKDILLH+E+NWN+  PGF SDE K FRKPL  D H+ERLA           A+ R+  G    N +
Subjt:  VEDILVDLAEEFVESITTFGCSLAKHRKSTTLEAKDILLHLEKNWNLTLPGFGSDEIKIFRKPLINDTHRERLA----------MASTRSSAGQAAGNTK

Query:  SSLTKTPA
            KTP+
Subjt:  SSLTKTPA

Arabidopsis top hitse value%identityAlignment
AT1G17440.1 Transcription initiation factor TFIID subunit A3.5e-2336.19Show/hide
Query:  QSFQGHGLLRVPSTSSSSSSLPNTSQGMQPTNQPWLPSSSQGKPPLPTPSYRPQANSSQQQISSAPQQQPAQSHQPQEHFAQQFQPSRSSQGLPHQQQAA
        Q  Q    L  P    SS SL    Q +    Q     S  G+  +     + Q    QQQ+   PQQQ  Q  Q Q    QQ Q       +  QQ + 
Subjt:  QSFQGHGLLRVPSTSSSSSSLPNTSQGMQPTNQPWLPSSSQGKPPLPTPSYRPQANSSQQQISSAPQQQPAQSHQPQEHFAQQFQPSRSSQGLPHQQQAA

Query:  RAQRPANPKASPLPPAQTNNAQA--SAPSRSITTEMEEPCSRILSKRSIGKLVNQINPSERLDPEVEDILVDLAEEFVESITTFGCSLAKHRKSTTLEAK
        R    A  K+  L  +Q    Q+  + P  S +++  E  +++L KR I  LV+Q++   +LDP+VED+L+++A++F++S+T+F CSLAKHRKS+ LE K
Subjt:  RAQRPANPKASPLPPAQTNNAQA--SAPSRSITTEMEEPCSRILSKRSIGKLVNQINPSERLDPEVEDILVDLAEEFVESITTFGCSLAKHRKSTTLEAK

Query:  DILLHLEKNWNLTLPGFGSDEIKIFRKPLINDTHRERLAMASTRSSAGQAAGNTKSS
        DILLHLEKN +LT+PGF S++ K   K +  D H++RLAM      + +   N  +S
Subjt:  DILLHLEKNWNLTLPGFGSDEIKIFRKPLINDTHRERLAMASTRSSAGQAAGNTKSS

AT1G17440.2 Transcription initiation factor TFIID subunit A3.5e-2336.19Show/hide
Query:  QSFQGHGLLRVPSTSSSSSSLPNTSQGMQPTNQPWLPSSSQGKPPLPTPSYRPQANSSQQQISSAPQQQPAQSHQPQEHFAQQFQPSRSSQGLPHQQQAA
        Q  Q    L  P    SS SL    Q +    Q     S  G+  +     + Q    QQQ+   PQQQ  Q  Q Q    QQ Q       +  QQ + 
Subjt:  QSFQGHGLLRVPSTSSSSSSLPNTSQGMQPTNQPWLPSSSQGKPPLPTPSYRPQANSSQQQISSAPQQQPAQSHQPQEHFAQQFQPSRSSQGLPHQQQAA

Query:  RAQRPANPKASPLPPAQTNNAQA--SAPSRSITTEMEEPCSRILSKRSIGKLVNQINPSERLDPEVEDILVDLAEEFVESITTFGCSLAKHRKSTTLEAK
        R    A  K+  L  +Q    Q+  + P  S +++  E  +++L KR I  LV+Q++   +LDP+VED+L+++A++F++S+T+F CSLAKHRKS+ LE K
Subjt:  RAQRPANPKASPLPPAQTNNAQA--SAPSRSITTEMEEPCSRILSKRSIGKLVNQINPSERLDPEVEDILVDLAEEFVESITTFGCSLAKHRKSTTLEAK

Query:  DILLHLEKNWNLTLPGFGSDEIKIFRKPLINDTHRERLAMASTRSSAGQAAGNTKSS
        DILLHLEKN +LT+PGF S++ K   K +  D H++RLAM      + +   N  +S
Subjt:  DILLHLEKNWNLTLPGFGSDEIKIFRKPLINDTHRERLAMASTRSSAGQAAGNTKSS

AT3G10070.1 TBP-associated factor 129.4e-6150.32Show/hide
Query:  RPVQSSLRP---PSTPNSASQSFQGHGLLR-VPSTSSSSSSLPNTSQGMQPTNQPWLPSSSQGKPPLPTPSYRPQANS---------SQQQISSA-----
        RP QSSLRP    ST +  +Q+FQGH L+R  P +S +  S   + Q +Q  NQPWL S+ QGKPPLP PSYRPQ NS          QQ IS++     
Subjt:  RPVQSSLRP---PSTPNSASQSFQGHGLLR-VPSTSSSSSSLPNTSQGMQPTNQPWLPSSSQGKPPLPTPSYRPQANS---------SQQQISSA-----

Query:  -PQQQPAQSHQPQEHFAQQFQPSRSSQGLPHQQQAARAQRPANPK-ASPLPPAQTNNAQASAPSRSITTEMEEPCSRILSKRSIGKLVNQINPSERLDPE
          QQQ  Q HQPQE   Q   P    Q L H  Q  R Q   N K  SP+ P+Q   AQ    +++++ E E    RIL KRSI +L+ QI+PSE+LDPE
Subjt:  -PQQQPAQSHQPQEHFAQQFQPSRSSQGLPHQQQAARAQRPANPK-ASPLPPAQTNNAQASAPSRSITTEMEEPCSRILSKRSIGKLVNQINPSERLDPE

Query:  VEDILVDLAEEFVESITTFGCSLAKHRKSTTLEAKDILLHLEKNWNLTLPGFGSDEIKIFRKPLINDTHRERLA----------MASTRSSAGQAAGNTK
        VEDIL D+AE+FVESITTFGCSLAKHRKS  LEAKDILLH+E+NWN+  PGF SDE K FRKPL  D H+ERLA           A+ R+  G    N +
Subjt:  VEDILVDLAEEFVESITTFGCSLAKHRKSTTLEAKDILLHLEKNWNLTLPGFGSDEIKIFRKPLINDTHRERLA----------MASTRSSAGQAAGNTK

Query:  SSLTKTPA
            KTP+
Subjt:  SSLTKTPA


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGACAACACAAAAACAAACAAAGAATCAGACCGCCCACACTTTTTAACTACCAACTGCTTAAAGAGAAAAAAACCAACTTGGAAACGACTTTTAAGGTTGCATAGACC
AGTGCAATCTTCTCTTAGGCCGCCATCTACCCCAAACTCAGCCTCCCAAAGTTTCCAAGGCCATGGTCTCTTGAGAGTACCATCAACAAGTTCTTCAAGTTCTTCATTGC
CAAACACATCACAAGGTATGCAACCCACCAACCAACCATGGTTGCCATCTAGCTCACAAGGAAAACCTCCGCTCCCAACACCTTCATATAGACCTCAAGCAAACTCATCT
CAGCAGCAAATTTCATCAGCTCCTCAACAACAACCTGCACAATCACATCAGCCGCAGGAGCATTTTGCACAACAATTTCAACCATCAAGGAGCTCGCAAGGTTTACCACA
TCAACAACAGGCTGCAAGAGCTCAGAGGCCAGCAAACCCTAAGGCTTCTCCTCTTCCACCTGCACAAACTAATAATGCACAGGCATCGGCCCCAAGCAGATCTATAACTA
CAGAAATGGAAGAACCCTGTAGTAGAATTCTCAGCAAAAGAAGTATTGGCAAATTGGTTAACCAAATCAATCCATCTGAGAGATTGGATCCTGAAGTGGAAGATATACTC
GTTGATCTGGCAGAAGAGTTTGTTGAGTCAATTACAACATTCGGTTGCTCATTAGCGAAGCATCGCAAATCTACTACATTGGAAGCAAAAGACATCCTTCTACATCTTGA
AAAAAATTGGAATCTAACACTTCCTGGGTTTGGTAGTGACGAGATTAAGATATTCAGAAAACCGCTTATAAATGATACTCACAGAGAACGTCTTGCAATGGCAAGTACCA
GGAGTTCTGCTGGACAGGCCGCTGGAAATACCAAAAGCAGTCTAACAAAAACACCTGCAGTTTAG
mRNA sequenceShow/hide mRNA sequence
ATGGACAACACAAAAACAAACAAAGAATCAGACCGCCCACACTTTTTAACTACCAACTGCTTAAAGAGAAAAAAACCAACTTGGAAACGACTTTTAAGGTTGCATAGACC
AGTGCAATCTTCTCTTAGGCCGCCATCTACCCCAAACTCAGCCTCCCAAAGTTTCCAAGGCCATGGTCTCTTGAGAGTACCATCAACAAGTTCTTCAAGTTCTTCATTGC
CAAACACATCACAAGGTATGCAACCCACCAACCAACCATGGTTGCCATCTAGCTCACAAGGAAAACCTCCGCTCCCAACACCTTCATATAGACCTCAAGCAAACTCATCT
CAGCAGCAAATTTCATCAGCTCCTCAACAACAACCTGCACAATCACATCAGCCGCAGGAGCATTTTGCACAACAATTTCAACCATCAAGGAGCTCGCAAGGTTTACCACA
TCAACAACAGGCTGCAAGAGCTCAGAGGCCAGCAAACCCTAAGGCTTCTCCTCTTCCACCTGCACAAACTAATAATGCACAGGCATCGGCCCCAAGCAGATCTATAACTA
CAGAAATGGAAGAACCCTGTAGTAGAATTCTCAGCAAAAGAAGTATTGGCAAATTGGTTAACCAAATCAATCCATCTGAGAGATTGGATCCTGAAGTGGAAGATATACTC
GTTGATCTGGCAGAAGAGTTTGTTGAGTCAATTACAACATTCGGTTGCTCATTAGCGAAGCATCGCAAATCTACTACATTGGAAGCAAAAGACATCCTTCTACATCTTGA
AAAAAATTGGAATCTAACACTTCCTGGGTTTGGTAGTGACGAGATTAAGATATTCAGAAAACCGCTTATAAATGATACTCACAGAGAACGTCTTGCAATGGCAAGTACCA
GGAGTTCTGCTGGACAGGCCGCTGGAAATACCAAAAGCAGTCTAACAAAAACACCTGCAGTTTAG
Protein sequenceShow/hide protein sequence
MDNTKTNKESDRPHFLTTNCLKRKKPTWKRLLRLHRPVQSSLRPPSTPNSASQSFQGHGLLRVPSTSSSSSSLPNTSQGMQPTNQPWLPSSSQGKPPLPTPSYRPQANSS
QQQISSAPQQQPAQSHQPQEHFAQQFQPSRSSQGLPHQQQAARAQRPANPKASPLPPAQTNNAQASAPSRSITTEMEEPCSRILSKRSIGKLVNQINPSERLDPEVEDIL
VDLAEEFVESITTFGCSLAKHRKSTTLEAKDILLHLEKNWNLTLPGFGSDEIKIFRKPLINDTHRERLAMASTRSSAGQAAGNTKSSLTKTPAV