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IVF0002295 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0002295
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionCtenidin-1-like
Genome locationchr08:29256510..29257008
RNA-Seq ExpressionIVF0002295
SyntenyIVF0002295
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0045150.1 ctenidin-1-like [Cucumis melo var. makuwa]1.18e-49100Show/hide
Query:  MAHSSVIILLVFVPIVVFFALLSIICWNSGRSSSGGGHAHFGGAAHDGGFHHHAGGHAHHVAIVTHSGGGGHDCGGAAGGGGGGGGGGGSSSAC
        MAHSSVIILLVFVPIVVFFALLSIICWNSGRSSSGGGHAHFGGAAHDGGFHHHAGGHAHHVAIVTHSGGGGHDCGGAAGGGGGGGGGGGSSSAC
Subjt:  MAHSSVIILLVFVPIVVFFALLSIICWNSGRSSSGGGHAHFGGAAHDGGFHHHAGGHAHHVAIVTHSGGGGHDCGGAAGGGGGGGGGGGSSSAC

KAG6581831.1 hypothetical protein SDJN03_21833, partial [Cucurbita argyrosperma subsp. sororia]3.39e-0855.68Show/hide
Query:  SSVIILLVFVPIVVFFALLSIICWNSGRSSSGGGHAHFGGAAHDGGFHHHAGGHA--HHVAIVTHSGGGGHDCGGAAGGGGGGGGGGG
        + +II +VF+ I V F +LS++C  +   ++ GG AHFGGAAH GG HH   GHA  HH     H GGGGHD GG  GGGGGGGGGGG
Subjt:  SSVIILLVFVPIVVFFALLSIICWNSGRSSSGGGHAHFGGAAHDGGFHHHAGGHA--HHVAIVTHSGGGGHDCGGAAGGGGGGGGGGG

KGN54298.1 hypothetical protein Csa_017993 [Cucumis sativus]1.28e-2974.47Show/hide
Query:  MAHSSVIILLVFVPIVVFFALLSIICWNSGRSSSGGGHAHFGGAAHDGGFHHHAGGHAHHVAIVTHSGGGGHDCGGAAGGGGGGGGGGGSSSAC
        MA   VI+ LVFV +VV F +LS ICW SG SSSGGGHAHFGGAAH GGFHHHAGGHAHHVA V HSGGGGH CGG AGGGGG      SSSAC
Subjt:  MAHSSVIILLVFVPIVVFFALLSIICWNSGRSSSGGGHAHFGGAAHDGGFHHHAGGHAHHVAIVTHSGGGGHDCGGAAGGGGGGGGGGGSSSAC

XP_008450046.1 PREDICTED: ctenidin-1-like [Cucumis melo]2.00e-41100Show/hide
Query:  MAHSSVIILLVFVPIVVFFALLSIICWNSGRSSSGGGHAHFGGAAHDGGFHHHAGGHAHHVAIVTHSGGGGHDCG
        MAHSSVIILLVFVPIVVFFALLSIICWNSGRSSSGGGHAHFGGAAHDGGFHHHAGGHAHHVAIVTHSGGGGHDCG
Subjt:  MAHSSVIILLVFVPIVVFFALLSIICWNSGRSSSGGGHAHFGGAAHDGGFHHHAGGHAHHVAIVTHSGGGGHDCG

XP_011654372.1 glycine-rich protein DOT1 [Cucumis sativus]5.05e-2878.31Show/hide
Query:  MAHSSVIILLVFVPIVVFFALLSIICWNSGRSSSGGGHAHFGGAAHDGGFHHHAGGHAHHVAIVTHSGGGGHDCGGAAGGGGG
        MA   VI+ LVFV +VV F +LS ICW SG SSSGGGHAHFGGAAH GGFHHHAGGHAHHVA V HSGGGGH CGG AGGGGG
Subjt:  MAHSSVIILLVFVPIVVFFALLSIICWNSGRSSSGGGHAHFGGAAHDGGFHHHAGGHAHHVAIVTHSGGGGHDCGGAAGGGGG

TrEMBL top hitse value%identityAlignment
A0A0A0KXN6 Uncharacterized protein3.2e-2074.47Show/hide
Query:  MAHSSVIILLVFVPIVVFFALLSIICWNSGRSSSGGGHAHFGGAAHDGGFHHHAGGHAHHVAIVTHSGGGGHDCGGAAGGGGGGGGGGGSSSAC
        MA   VI+ LVFV +VV F +LS ICW SG SSSGGGHAHFGGAAH GGFHHHAGGHAHHVA V HSGGGGH C      GGG GGGGGSSSAC
Subjt:  MAHSSVIILLVFVPIVVFFALLSIICWNSGRSSSGGGHAHFGGAAHDGGFHHHAGGHAHHVAIVTHSGGGGHDCGGAAGGGGGGGGGGGSSSAC

A0A1S3BPC8 ctenidin-1-like5.6e-2580.39Show/hide
Query:  MAHSSVIILLVFVPIVVFFALLSIICWNSGRSSSGGGHAHFGGAAHDGGFHHHAGGHAHHVAIVTHSGGGGHDCGGAA---------GGGGGGGGGGGSS
        MAHSSVIILLVFVPIVVFFALLSIICWNSGRSSSGGGHAHFGGAAHDGGFHHHAGGHAHHVAIVTHSGGGGHDCG  A         GGG     G  S 
Subjt:  MAHSSVIILLVFVPIVVFFALLSIICWNSGRSSSGGGHAHFGGAAHDGGFHHHAGGHAHHVAIVTHSGGGGHDCGGAA---------GGGGGGGGGGGSS

Query:  SA
         A
Subjt:  SA

A0A5D3DIY3 Ctenidin-1-like8.3e-37100Show/hide
Query:  MAHSSVIILLVFVPIVVFFALLSIICWNSGRSSSGGGHAHFGGAAHDGGFHHHAGGHAHHVAIVTHSGGGGHDCGGAAGGGGGGGGGGGSSSAC
        MAHSSVIILLVFVPIVVFFALLSIICWNSGRSSSGGGHAHFGGAAHDGGFHHHAGGHAHHVAIVTHSGGGGHDCGGAAGGGGGGGGGGGSSSAC
Subjt:  MAHSSVIILLVFVPIVVFFALLSIICWNSGRSSSGGGHAHFGGAAHDGGFHHHAGGHAHHVAIVTHSGGGGHDCGGAAGGGGGGGGGGGSSSAC

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTCATTCGTCTGTTATAATCCTTCTGGTTTTTGTTCCCATTGTTGTATTTTTCGCGTTGTTGAGTATTATTTGCTGGAATTCTGGTCGCAGTTCCAGCGGCGGAGG
ACATGCTCATTTCGGCGGCGCCGCCCATGATGGAGGATTCCATCATCATGCCGGCGGTCATGCTCACCACGTGGCCATCGTAACCCATTCTGGAGGTGGAGGACACGATT
GTGGAGGTGCGGCCGGAGGCGGAGGGGGAGGCGGAGGCGGAGGCGGCTCTAGCTCTGCCTGTTGA
mRNA sequenceShow/hide mRNA sequence
CTTCATACGGAAAGGAAAAAAAAAATTATATTCTAAAAAACAAAAGGGTCCAATACCAATAATAAAAAATGGCTCATTCGTCTGTTATAATCCTTCTGGTTTTTGTTCCC
ATTGTTGTATTTTTCGCGTTGTTGAGTATTATTTGCTGGAATTCTGGTCGCAGTTCCAGCGGCGGAGGACATGCTCATTTCGGCGGCGCCGCCCATGATGGAGGATTCCA
TCATCATGCCGGCGGTCATGCTCACCACGTGGCCATCGTAACCCATTCTGGAGGTGGAGGACACGATTGTGGAGGTGCGGCCGGAGGCGGAGGGGGAGGCGGAGGCGGAG
GCGGCTCTAGCTCTGCCTGTTGATGATCATTCTTTTTGCTGTCGATTGTGGCCGTATATATGTATTCATTAAACGATTAATTAGGTCTTAATCTTTCCCTATACAATTGA
ATGAATTTGTTCTGGTAATTCTTTTATTCAAATGAATTTGTATGTATTAATTAAAGTCC
Protein sequenceShow/hide protein sequence
MAHSSVIILLVFVPIVVFFALLSIICWNSGRSSSGGGHAHFGGAAHDGGFHHHAGGHAHHVAIVTHSGGGGHDCGGAAGGGGGGGGGGGSSSAC