; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

IVF0002304 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0002304
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionRRM domain-containing protein
Genome locationchr03:20050884..20054330
RNA-Seq ExpressionIVF0002304
SyntenyIVF0002304
Gene Ontology termsGO:0003723 - RNA binding (molecular function)
InterPro domainsIPR000504 - RNA recognition motif domain
IPR012677 - Nucleotide-binding alpha-beta plait domain superfamily
IPR035979 - RNA-binding domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004140894.1 uncharacterized RNA-binding protein C1827.05c [Cucumis sativus]7.10e-14495.75Show/hide
Query:  MGAKAKKAMKKKLKKATPLSSDKKESADFLPLEGGPGRKLPVQKPLESTATVLYIGRIPHGFFEKEMEGFFGQFGKVKRLRIARNKKTGKSRHFGYVEFE
        MGAKA+KAMKKKL KATPLSSDKKESADFLPLEGGPGRKL VQKPLESTATVLYIGRIPHGFFEKEMEGFFGQFGKVKRLRIARNKKTGKS+HFGYVEFE
Subjt:  MGAKAKKAMKKKLKKATPLSSDKKESADFLPLEGGPGRKLPVQKPLESTATVLYIGRIPHGFFEKEMEGFFGQFGKVKRLRIARNKKTGKSRHFGYVEFE

Query:  SPEVAKIVADSMHNYLLYEHILKVHLIAPEHVHPKLWKGFNYRHTPLNWSELERKQHNKERTLVEHKKLVDRILKRDQARQKRIRAAGIDYECPEIVGSV
        SPEVAKIVADSMHNYLLYEHILKVHLI PEHVHPKLWKGFNYRH PLNWSELERK HNKERTL EHKKLVDRILKRDQARQKRIRAAGIDYECPEIVG V
Subjt:  SPEVAKIVADSMHNYLLYEHILKVHLIAPEHVHPKLWKGFNYRHTPLNWSELERKQHNKERTLVEHKKLVDRILKRDQARQKRIRAAGIDYECPEIVGSV

Query:  QPTPKKIKFDED
        QPTPKKIKFDED
Subjt:  QPTPKKIKFDED

XP_008456579.1 PREDICTED: uncharacterized RNA-binding protein C1827.05c [Cucumis melo]6.87e-151100Show/hide
Query:  MGAKAKKAMKKKLKKATPLSSDKKESADFLPLEGGPGRKLPVQKPLESTATVLYIGRIPHGFFEKEMEGFFGQFGKVKRLRIARNKKTGKSRHFGYVEFE
        MGAKAKKAMKKKLKKATPLSSDKKESADFLPLEGGPGRKLPVQKPLESTATVLYIGRIPHGFFEKEMEGFFGQFGKVKRLRIARNKKTGKSRHFGYVEFE
Subjt:  MGAKAKKAMKKKLKKATPLSSDKKESADFLPLEGGPGRKLPVQKPLESTATVLYIGRIPHGFFEKEMEGFFGQFGKVKRLRIARNKKTGKSRHFGYVEFE

Query:  SPEVAKIVADSMHNYLLYEHILKVHLIAPEHVHPKLWKGFNYRHTPLNWSELERKQHNKERTLVEHKKLVDRILKRDQARQKRIRAAGIDYECPEIVGSV
        SPEVAKIVADSMHNYLLYEHILKVHLIAPEHVHPKLWKGFNYRHTPLNWSELERKQHNKERTLVEHKKLVDRILKRDQARQKRIRAAGIDYECPEIVGSV
Subjt:  SPEVAKIVADSMHNYLLYEHILKVHLIAPEHVHPKLWKGFNYRHTPLNWSELERKQHNKERTLVEHKKLVDRILKRDQARQKRIRAAGIDYECPEIVGSV

Query:  QPTPKKIKFDED
        QPTPKKIKFDED
Subjt:  QPTPKKIKFDED

XP_022922397.1 uncharacterized RNA-binding protein C1827.05c-like [Cucurbita moschata]1.13e-14093.4Show/hide
Query:  MGAKAKKAMKKKLKKATPLSSDKKESADFLPLEGGPGRKLPVQKPLESTATVLYIGRIPHGFFEKEMEGFFGQFGKVKRLRIARNKKTGKSRHFGYVEFE
        MGAKAKKAMKKKL KAT L S+KKESADFLPLEGGPGRKLP QKPLESTATVLYI RIPHGFFEKEMEGFFGQFGKVKRLRIARNKKTGKSRHFGY+EF+
Subjt:  MGAKAKKAMKKKLKKATPLSSDKKESADFLPLEGGPGRKLPVQKPLESTATVLYIGRIPHGFFEKEMEGFFGQFGKVKRLRIARNKKTGKSRHFGYVEFE

Query:  SPEVAKIVADSMHNYLLYEHILKVHLIAPEHVHPKLWKGFNYRHTPLNWSELERKQHNKERTLVEHKKLVDRILKRDQARQKRIRAAGIDYECPEIVGSV
        SPEVAKIVADSMHNYLLYEHILKVHLIAPEHVHPKLWKGFNYRH PLNWSELERK+HNKERTL EH+KLV+RILKR+QARQKRIRAAGIDYECPEIVGSV
Subjt:  SPEVAKIVADSMHNYLLYEHILKVHLIAPEHVHPKLWKGFNYRHTPLNWSELERKQHNKERTLVEHKKLVDRILKRDQARQKRIRAAGIDYECPEIVGSV

Query:  QPTPKKIKFDED
        QPTPKKIKFDED
Subjt:  QPTPKKIKFDED

XP_022993750.1 uncharacterized RNA-binding protein C1827.05c-like [Cucurbita maxima]1.32e-13991.98Show/hide
Query:  MGAKAKKAMKKKLKKATPLSSDKKESADFLPLEGGPGRKLPVQKPLESTATVLYIGRIPHGFFEKEMEGFFGQFGKVKRLRIARNKKTGKSRHFGYVEFE
        MGAKAKKAMKKKL KAT   SDKKESADFLPLEGGPGRKLP QKPLE+TATVLYIGRIPHGFFEKEMEGFFGQFGKVKR+RIARN+KTGKSRHFGY+EFE
Subjt:  MGAKAKKAMKKKLKKATPLSSDKKESADFLPLEGGPGRKLPVQKPLESTATVLYIGRIPHGFFEKEMEGFFGQFGKVKRLRIARNKKTGKSRHFGYVEFE

Query:  SPEVAKIVADSMHNYLLYEHILKVHLIAPEHVHPKLWKGFNYRHTPLNWSELERKQHNKERTLVEHKKLVDRILKRDQARQKRIRAAGIDYECPEIVGSV
        SPEVAKIVADSMHNYLLYEH+LKVHLI+PEHVHPKLWKGFNYRH PL+WSELERKQHNKERTL EHKKLV+RILKRDQAR+KRIRAAGIDYECPEIVGSV
Subjt:  SPEVAKIVADSMHNYLLYEHILKVHLIAPEHVHPKLWKGFNYRHTPLNWSELERKQHNKERTLVEHKKLVDRILKRDQARQKRIRAAGIDYECPEIVGSV

Query:  QPTPKKIKFDED
        QP PKKIKFDED
Subjt:  QPTPKKIKFDED

XP_038885284.1 MKI67 FHA domain-interacting nucleolar phosphoprotein [Benincasa hispida]2.04e-14395.28Show/hide
Query:  MGAKAKKAMKKKLKKATPLSSDKKESADFLPLEGGPGRKLPVQKPLESTATVLYIGRIPHGFFEKEMEGFFGQFGKVKRLRIARNKKTGKSRHFGYVEFE
        MGAKAKKAMKKKL KAT LS  K+ESADFLPLEGGPGRKLP QKPLESTATVLYIGRIPHGFFEKEMEGFFGQFGKVKRLRIARNKKTGKSRHFGY+EFE
Subjt:  MGAKAKKAMKKKLKKATPLSSDKKESADFLPLEGGPGRKLPVQKPLESTATVLYIGRIPHGFFEKEMEGFFGQFGKVKRLRIARNKKTGKSRHFGYVEFE

Query:  SPEVAKIVADSMHNYLLYEHILKVHLIAPEHVHPKLWKGFNYRHTPLNWSELERKQHNKERTLVEHKKLVDRILKRDQARQKRIRAAGIDYECPEIVGSV
        SPEVAKIVADSMHNYLLYEHILKVHLIAPEHVHPKLWKGFNYRHTPLNWSELERKQHNKERTL EHKKLVDRI+KRDQARQKRIRAAGIDYECPEIVGSV
Subjt:  SPEVAKIVADSMHNYLLYEHILKVHLIAPEHVHPKLWKGFNYRHTPLNWSELERKQHNKERTLVEHKKLVDRILKRDQARQKRIRAAGIDYECPEIVGSV

Query:  QPTPKKIKFDED
        QP PKKIKFDED
Subjt:  QPTPKKIKFDED

TrEMBL top hitse value%identityAlignment
A0A0A0KCE3 RRM domain-containing protein1.5e-11095.75Show/hide
Query:  MGAKAKKAMKKKLKKATPLSSDKKESADFLPLEGGPGRKLPVQKPLESTATVLYIGRIPHGFFEKEMEGFFGQFGKVKRLRIARNKKTGKSRHFGYVEFE
        MGAKA+KAMKKKL KATPLSSDKKESADFLPLEGGPGRKL VQKPLESTATVLYIGRIPHGFFEKEMEGFFGQFGKVKRLRIARNKKTGKS+HFGYVEFE
Subjt:  MGAKAKKAMKKKLKKATPLSSDKKESADFLPLEGGPGRKLPVQKPLESTATVLYIGRIPHGFFEKEMEGFFGQFGKVKRLRIARNKKTGKSRHFGYVEFE

Query:  SPEVAKIVADSMHNYLLYEHILKVHLIAPEHVHPKLWKGFNYRHTPLNWSELERKQHNKERTLVEHKKLVDRILKRDQARQKRIRAAGIDYECPEIVGSV
        SPEVAKIVADSMHNYLLYEHILKVHLI PEHVHPKLWKGFNYRH PLNWSELERK HNKERTL EHKKLVDRILKRDQARQKRIRAAGIDYECPEIVG V
Subjt:  SPEVAKIVADSMHNYLLYEHILKVHLIAPEHVHPKLWKGFNYRHTPLNWSELERKQHNKERTLVEHKKLVDRILKRDQARQKRIRAAGIDYECPEIVGSV

Query:  QPTPKKIKFDED
        QPTPKKIKFDED
Subjt:  QPTPKKIKFDED

A0A1S3C4U7 uncharacterized RNA-binding protein C1827.05c7.0e-116100Show/hide
Query:  MGAKAKKAMKKKLKKATPLSSDKKESADFLPLEGGPGRKLPVQKPLESTATVLYIGRIPHGFFEKEMEGFFGQFGKVKRLRIARNKKTGKSRHFGYVEFE
        MGAKAKKAMKKKLKKATPLSSDKKESADFLPLEGGPGRKLPVQKPLESTATVLYIGRIPHGFFEKEMEGFFGQFGKVKRLRIARNKKTGKSRHFGYVEFE
Subjt:  MGAKAKKAMKKKLKKATPLSSDKKESADFLPLEGGPGRKLPVQKPLESTATVLYIGRIPHGFFEKEMEGFFGQFGKVKRLRIARNKKTGKSRHFGYVEFE

Query:  SPEVAKIVADSMHNYLLYEHILKVHLIAPEHVHPKLWKGFNYRHTPLNWSELERKQHNKERTLVEHKKLVDRILKRDQARQKRIRAAGIDYECPEIVGSV
        SPEVAKIVADSMHNYLLYEHILKVHLIAPEHVHPKLWKGFNYRHTPLNWSELERKQHNKERTLVEHKKLVDRILKRDQARQKRIRAAGIDYECPEIVGSV
Subjt:  SPEVAKIVADSMHNYLLYEHILKVHLIAPEHVHPKLWKGFNYRHTPLNWSELERKQHNKERTLVEHKKLVDRILKRDQARQKRIRAAGIDYECPEIVGSV

Query:  QPTPKKIKFDED
        QPTPKKIKFDED
Subjt:  QPTPKKIKFDED

A0A5D3CMU5 Putative RNA-binding protein1.3e-106100Show/hide
Query:  MGAKAKKAMKKKLKKATPLSSDKKESADFLPLEGGPGRKLPVQKPLESTATVLYIGRIPHGFFEKEMEGFFGQFGKVKRLRIARNKKTGKSRHFGYVEFE
        MGAKAKKAMKKKLKKATPLSSDKKESADFLPLEGGPGRKLPVQKPLESTATVLYIGRIPHGFFEKEMEGFFGQFGKVKRLRIARNKKTGKSRHFGYVEFE
Subjt:  MGAKAKKAMKKKLKKATPLSSDKKESADFLPLEGGPGRKLPVQKPLESTATVLYIGRIPHGFFEKEMEGFFGQFGKVKRLRIARNKKTGKSRHFGYVEFE

Query:  SPEVAKIVADSMHNYLLYEHILKVHLIAPEHVHPKLWKGFNYRHTPLNWSELERKQHNKERTLVEHKKLVDRILKRDQARQKRIRAAGIDYECPEIV
        SPEVAKIVADSMHNYLLYEHILKVHLIAPEHVHPKLWKGFNYRHTPLNWSELERKQHNKERTLVEHKKLVDRILKRDQARQKRIRAAGIDYECPEIV
Subjt:  SPEVAKIVADSMHNYLLYEHILKVHLIAPEHVHPKLWKGFNYRHTPLNWSELERKQHNKERTLVEHKKLVDRILKRDQARQKRIRAAGIDYECPEIV

A0A6J1E350 uncharacterized RNA-binding protein C1827.05c-like4.1e-10893.4Show/hide
Query:  MGAKAKKAMKKKLKKATPLSSDKKESADFLPLEGGPGRKLPVQKPLESTATVLYIGRIPHGFFEKEMEGFFGQFGKVKRLRIARNKKTGKSRHFGYVEFE
        MGAKAKKAMKKKL KAT L S+KKESADFLPLEGGPGRKLP QKPLESTATVLYI RIPHGFFEKEMEGFFGQFGKVKRLRIARNKKTGKSRHFGY+EF+
Subjt:  MGAKAKKAMKKKLKKATPLSSDKKESADFLPLEGGPGRKLPVQKPLESTATVLYIGRIPHGFFEKEMEGFFGQFGKVKRLRIARNKKTGKSRHFGYVEFE

Query:  SPEVAKIVADSMHNYLLYEHILKVHLIAPEHVHPKLWKGFNYRHTPLNWSELERKQHNKERTLVEHKKLVDRILKRDQARQKRIRAAGIDYECPEIVGSV
        SPEVAKIVADSMHNYLLYEHILKVHLIAPEHVHPKLWKGFNYRH PLNWSELERK+HNKERTL EH+KLV+RILKR+QARQKRIRAAGIDYECPEIVGSV
Subjt:  SPEVAKIVADSMHNYLLYEHILKVHLIAPEHVHPKLWKGFNYRHTPLNWSELERKQHNKERTLVEHKKLVDRILKRDQARQKRIRAAGIDYECPEIVGSV

Query:  QPTPKKIKFDED
        QPTPKKIKFDED
Subjt:  QPTPKKIKFDED

A0A6J1JZE0 uncharacterized RNA-binding protein C1827.05c-like2.7e-10791.98Show/hide
Query:  MGAKAKKAMKKKLKKATPLSSDKKESADFLPLEGGPGRKLPVQKPLESTATVLYIGRIPHGFFEKEMEGFFGQFGKVKRLRIARNKKTGKSRHFGYVEFE
        MGAKAKKAMKKKL KAT   SDKKESADFLPLEGGPGRKLP QKPLE+TATVLYIGRIPHGFFEKEMEGFFGQFGKVKR+RIARN+KTGKSRHFGY+EFE
Subjt:  MGAKAKKAMKKKLKKATPLSSDKKESADFLPLEGGPGRKLPVQKPLESTATVLYIGRIPHGFFEKEMEGFFGQFGKVKRLRIARNKKTGKSRHFGYVEFE

Query:  SPEVAKIVADSMHNYLLYEHILKVHLIAPEHVHPKLWKGFNYRHTPLNWSELERKQHNKERTLVEHKKLVDRILKRDQARQKRIRAAGIDYECPEIVGSV
        SPEVAKIVADSMHNYLLYEH+LKVHLI+PEHVHPKLWKGFNYRH PL+WSELERKQHNKERTL EHKKLV+RILKRDQAR+KRIRAAGIDYECPEIVGSV
Subjt:  SPEVAKIVADSMHNYLLYEHILKVHLIAPEHVHPKLWKGFNYRHTPLNWSELERKQHNKERTLVEHKKLVDRILKRDQARQKRIRAAGIDYECPEIVGSV

Query:  QPTPKKIKFDED
        QP PKKIKFDED
Subjt:  QPTPKKIKFDED

SwissProt top hitse value%identityAlignment
O74978 Uncharacterized RNA-binding protein C1827.05c1.1e-2839.35Show/hide
Query:  RKLPVQKPLESTATVLYIGRIPHGFFEKEMEGFFGQFGKVKRLRIARNKKTGKSRHFGYVEFESPEVAKIVADSMHNYLLYEHILKVHLIAPEHVHPKLW
        +K+   K L+    VLY+GR+PHGF+EK+M  +F QFG V RLR++RN+KTG S+H+ ++EFES +VA +VA++MHNYLLY  +L+  +I  + VH  ++
Subjt:  RKLPVQKPLESTATVLYIGRIPHGFFEKEMEGFFGQFGKVKRLRIARNKKTGKSRHFGYVEFESPEVAKIVADSMHNYLLYEHILKVHLIAPEHVHPKLW

Query:  KGFNYRHTPLNWSELERKQHNKERTLVEHKKLVDRILKRDQARQKRIRAAGIDYE
        KG +     +  + + R QH K  +  +  KL+ R  ++ + ++++++  GI  E
Subjt:  KGFNYRHTPLNWSELERKQHNKERTLVEHKKLVDRILKRDQARQKRIRAAGIDYE

Q3SZM1 MKI67 FHA domain-interacting nucleolar phosphoprotein2.0e-2739.74Show/hide
Query:  QKPLESTATVLYIGRIPHGFFEKEMEGFFGQFGKVKRLRIARNKKTGKSRHFGYVEFESPEVAKIVADSMHNYLLYEHILKVHLIAPEHVHPKLWKGFNY
        Q+  + T  V+Y+G +P   +E ++  +F QFG V R R++R+KKTG S+ +G+VEFES +VAKI A++M+NYL  E +LK H I PE VH +L++ +  
Subjt:  QKPLESTATVLYIGRIPHGFFEKEMEGFFGQFGKVKRLRIARNKKTGKSRHFGYVEFESPEVAKIVADSMHNYLLYEHILKVHLIAPEHVHPKLWKGFNY

Query:  RHTPLNWSELER-KQHNKERTLVEHKKLVDRILKRDQARQKRIRAAGIDYECPEIV
         H P         K++N+ R+LV+  ++ +R  K+++  +KR+   GIDY  P +V
Subjt:  RHTPLNWSELER-KQHNKERTLVEHKKLVDRILKRDQARQKRIRAAGIDYECPEIV

Q6GL69 MKI67 FHA domain-interacting nucleolar phosphoprotein-like5.3e-2844.76Show/hide
Query:  VLYIGRIPHGFFEKEMEGFFGQFGKVKRLRIARNKKTGKSRHFGYVEFESPEVAKIVADSMHNYLLYEHILKVHLIAPEHVHPKLWKGFNYRHTPLNWSE
        V+YIG IP   +E ++  +F QFG V RLR++R+KKTG S+ + YVEFE  EVAKIVAD+M+NYL  E +LK   + PE VHP+L+ G   +        
Subjt:  VLYIGRIPHGFFEKEMEGFFGQFGKVKRLRIARNKKTGKSRHFGYVEFESPEVAKIVADSMHNYLLYEHILKVHLIAPEHVHPKLWKGFNYRHTPLNWSE

Query:  LERKQHNKERTLVEHKKLVDRILKRDQARQKRIRAAGIDYECP
        + R  +NK R+  E KK+  R+L ++   +KR+   GIDY+ P
Subjt:  LERKQHNKERTLVEHKKLVDRILKRDQARQKRIRAAGIDYECP

Q7SYS2 MKI67 FHA domain-interacting nucleolar phosphoprotein-like5.3e-2841.48Show/hide
Query:  LSSDKKESADFLPLEGGPGRKLPVQKPLESTATVLYIGRIPHGFFEKEMEGFFGQFGKVKRLRIARNKKTGKSRHFGYVEFESPEVAKIVADSMHNYLLY
        LS D K   DF        RK   +K    T  V+YIG IP    E +++ +F QFG V RLR++R+KKTG S+ + YVE+E  EVAKIVAD+M+NYL  
Subjt:  LSSDKKESADFLPLEGGPGRKLPVQKPLESTATVLYIGRIPHGFFEKEMEGFFGQFGKVKRLRIARNKKTGKSRHFGYVEFESPEVAKIVADSMHNYLLY

Query:  EHILKVHLIAPEHVHPKLWKGFNYRHTPLNWSELERKQHNKERTLVEHKKLVDRILKRDQARQKRIRAAGIDYECP
        E +LK   + PE VHP+L+ G N R        + R  +N +R   E KK+  R++ ++   +KR+   GIDY+ P
Subjt:  EHILKVHLIAPEHVHPKLWKGFNYRHTPLNWSELERKQHNKERTLVEHKKLVDRILKRDQARQKRIRAAGIDYECP

Q8JIY8 MKI67 FHA domain-interacting nucleolar phosphoprotein1.4e-2844.3Show/hide
Query:  VLYIGRIPHGFFEKEMEGFFGQFGKVKRLRIARNKKTGKSRHFGYVEFESPEVAKIVADSMHNYLLYEHILKVHLIAPEHVHPKLWKGFNYRHTPLNWSE
        VLY+G +P G FE +++ +F QFGKV RLR++R+KKTG S+ +G+VEFE  EVAKIVA++M+NYL+ E I+K H+I PE VH KL+ G         +  
Subjt:  VLYIGRIPHGFFEKEMEGFFGQFGKVKRLRIARNKKTGKSRHFGYVEFESPEVAKIVADSMHNYLLYEHILKVHLIAPEHVHPKLWKGFNYRHTPLNWSE

Query:  LERKQHNKERTLVEHKKLVDRILKRDQARQKRIRAAGIDYECPEIVGSV
        + R  +NK  T  + KK+  ++L ++   +KR+ A GIDY+ P     +
Subjt:  LERKQHNKERTLVEHKKLVDRILKRDQARQKRIRAAGIDYECPEIVGSV

Arabidopsis top hitse value%identityAlignment
AT3G07810.1 RNA-binding (RRM/RBD/RNP motifs) family protein1.5e-0636.23Show/hide
Query:  LESTATVLYIGRIPHGFFEKEMEGFFGQFGKVKRLRIARNKKTGKSRHFGYVEFESPEVAKIVADSMHN
        ++S    L+IG I     E+ ++ +F  FG+V    I +++ TG++R FG+V F  P VA+IV    HN
Subjt:  LESTATVLYIGRIPHGFFEKEMEGFFGQFGKVKRLRIARNKKTGKSRHFGYVEFESPEVAKIVADSMHN

AT3G07810.2 RNA-binding (RRM/RBD/RNP motifs) family protein1.5e-0636.23Show/hide
Query:  LESTATVLYIGRIPHGFFEKEMEGFFGQFGKVKRLRIARNKKTGKSRHFGYVEFESPEVAKIVADSMHN
        ++S    L+IG I     E+ ++ +F  FG+V    I +++ TG++R FG+V F  P VA+IV    HN
Subjt:  LESTATVLYIGRIPHGFFEKEMEGFFGQFGKVKRLRIARNKKTGKSRHFGYVEFESPEVAKIVADSMHN

AT3G52660.1 RNA-binding (RRM/RBD/RNP motifs) family protein1.5e-0626.47Show/hide
Query:  DKKESADFLPLEGGPGRKLPVQ-KPLESTATVLYIGRIPHGFFEKEMEGFFGQFGKVKRLRIARNKKTGKSRHFGYVEFESPEVAKIVADSMHNYLLYEH
        +++E  D +  E    +K  V+   L    + +Y+G IP    E +++GF G  G+V  +RI R K +G  + + +V F S ++A    D+++N      
Subjt:  DKKESADFLPLEGGPGRKLPVQ-KPLESTATVLYIGRIPHGFFEKEMEGFFGQFGKVKRLRIARNKKTGKSRHFGYVEFESPEVAKIVADSMHNYLLYEH

Query:  ILKVHLIAPEHVHPKLWKGFNYRHTPLNWSELERKQ
         +K      +H   +L+ G    + P NW E + K+
Subjt:  ILKVHLIAPEHVHPKLWKGFNYRHTPLNWSELERKQ

AT4G26650.1 RNA-binding (RRM/RBD/RNP motifs) family protein9.0e-0728.18Show/hide
Query:  PVQKPLESTATV--LYIGRIPHGFFEKEMEGFFGQFGKVKRLRIARNKKTGKSRHFGYVEFESPEVAKIVADSMH-----------------NYLLYEHI
        P ++ +ES + +  L+IG I     E+ ++ +FG++G +    I R++ TG++R FG++ F  P VA+ V    H                   +L  H 
Subjt:  PVQKPLESTATV--LYIGRIPHGFFEKEMEGFFGQFGKVKRLRIARNKKTGKSRHFGYVEFESPEVAKIVADSMH-----------------NYLLYEHI

Query:  LKVHLIAPEH
          +HLI+P H
Subjt:  LKVHLIAPEH

AT5G04600.1 RNA-binding (RRM/RBD/RNP motifs) family protein2.2e-7461.54Show/hide
Query:  MGAKAKKAMKKKLKKAT--------PLSSDKKESADFLPLEGGPGRKLPV-QKPLESTATVLYIGRIPHGFFEKEMEGFFGQFGKVKRLRIARNKKTGKS
        MGAKAKKA+KK +KK          PL  + K SADFLPLEGGP RK PV   PL++ ATVLYIGRIPHGF+E E+E FF QFG VKR+R+ARNKKTGKS
Subjt:  MGAKAKKAMKKKLKKAT--------PLSSDKKESADFLPLEGGPGRKLPV-QKPLESTATVLYIGRIPHGFFEKEMEGFFGQFGKVKRLRIARNKKTGKS

Query:  RHFGYVEFESPEVAKIVADSMHNYLLYEHILKVHLIAPEHVHPKLWKGFNYRHTPLNWSELERKQHNKERTLVEHKKLVDRILKRDQARQKRIRAAGIDY
        +HFG+++FE PEVA+I A +M++YLL EH+LKVH+I PE+V P LW+GF     P++  ++ER+Q NKERTL EH+K++ +I+K+DQ R+KRI AAGI+Y
Subjt:  RHFGYVEFESPEVAKIVADSMHNYLLYEHILKVHLIAPEHVHPKLWKGFNYRHTPLNWSELERKQHNKERTLVEHKKLVDRILKRDQARQKRIRAAGIDY

Query:  ECPEIVGSVQPTPKKIKFDED
        ECPE+VG+ QP PK+IKF E+
Subjt:  ECPEIVGSVQPTPKKIKFDED


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGGGCTAAGGCGAAGAAAGCTATGAAGAAGAAACTCAAGAAGGCTACTCCTCTCTCATCCGACAAGAAGGAATCTGCCGATTTCTTGCCGTTGGAGGGTGGTCCTGG
GCGTAAGTTACCGGTACAGAAGCCATTGGAAAGTACTGCTACTGTTCTTTACATTGGCCGCATACCCCATGGTTTCTTCGAGAAGGAGATGGAAGGGTTTTTCGGACAGT
TTGGGAAAGTCAAAAGATTAAGAATTGCACGAAATAAAAAGACGGGGAAGTCGAGGCATTTTGGCTACGTTGAATTTGAATCTCCAGAGGTAGCAAAAATTGTAGCTGAT
TCCATGCATAACTATTTGTTGTATGAACACATTCTGAAAGTCCATCTAATTGCTCCCGAGCATGTTCATCCTAAACTATGGAAAGGTTTTAACTATCGCCATACGCCCTT
AAACTGGTCTGAACTTGAGCGTAAGCAGCATAACAAGGAAAGGACATTGGTGGAACACAAGAAGTTGGTGGATAGAATATTGAAGCGGGATCAGGCTAGACAGAAGAGGA
TAAGGGCTGCTGGGATTGATTATGAGTGTCCAGAAATTGTGGGTAGTGTCCAACCAACTCCCAAGAAGATCAAGTTCGATGAAGATTAG
mRNA sequenceShow/hide mRNA sequence
CTAAAACGCAGCGTTTTAACCCGTCTTCGACCTACGCACTACGTAGCCTCCATTCTCTTGAGCCCTCTCATTCCGCCGCCGCCAACTCCTCTGCTTTCTTCCTTCTTCCT
TCTACTCCTCTTTCAGTTCAATGGGGGCTAAGGCGAAGAAAGCTATGAAGAAGAAACTCAAGAAGGCTACTCCTCTCTCATCCGACAAGAAGGAATCTGCCGATTTCTTG
CCGTTGGAGGGTGGTCCTGGGCGTAAGTTACCGGTACAGAAGCCATTGGAAAGTACTGCTACTGTTCTTTACATTGGCCGCATACCCCATGGTTTCTTCGAGAAGGAGAT
GGAAGGGTTTTTCGGACAGTTTGGGAAAGTCAAAAGATTAAGAATTGCACGAAATAAAAAGACGGGGAAGTCGAGGCATTTTGGCTACGTTGAATTTGAATCTCCAGAGG
TAGCAAAAATTGTAGCTGATTCCATGCATAACTATTTGTTGTATGAACACATTCTGAAAGTCCATCTAATTGCTCCCGAGCATGTTCATCCTAAACTATGGAAAGGTTTT
AACTATCGCCATACGCCCTTAAACTGGTCTGAACTTGAGCGTAAGCAGCATAACAAGGAAAGGACATTGGTGGAACACAAGAAGTTGGTGGATAGAATATTGAAGCGGGA
TCAGGCTAGACAGAAGAGGATAAGGGCTGCTGGGATTGATTATGAGTGTCCAGAAATTGTGGGTAGTGTCCAACCAACTCCCAAGAAGATCAAGTTCGATGAAGATTAGA
ATAACGGTTCAGTTCATAGGAAGCTATAATATTATCACACCAGAGGAAGGAGGAGGAAGCCCTTGCCTTGTTCCAGTTTCTTATGCTGGAGGATGGGATAACCTTCCCAA
TAACCTTGAATCTCCTAGTTTTGATCTGTGAAATTTGTGTCAAAACATTACTTTTAAGCTCTTTAGTAATATGTATTCGCTTTTATAAAAATGAAAAAAAAAGAAGTTAT
ATCCAAAGCTTTTACGGCTTACAATTCTGATCTTCTCAAGGATAGGAAAAATGAAAGGTAAATTTGAAAGTTCTACCATGTCAGATCTATATGTATAGTTTATATCATGT
TTCAGTTTCATCAATCTCATTCTTAATTAGCTTCTTATTTAGATGGAACATAGTTTACATGTGGTCCCCAACACTTATTGTTTGAATTGTTCCTATACTGACATGAATGC
GCC
Protein sequenceShow/hide protein sequence
MGAKAKKAMKKKLKKATPLSSDKKESADFLPLEGGPGRKLPVQKPLESTATVLYIGRIPHGFFEKEMEGFFGQFGKVKRLRIARNKKTGKSRHFGYVEFESPEVAKIVAD
SMHNYLLYEHILKVHLIAPEHVHPKLWKGFNYRHTPLNWSELERKQHNKERTLVEHKKLVDRILKRDQARQKRIRAAGIDYECPEIVGSVQPTPKKIKFDED