; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

IVF0002312 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0002312
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionRNA polymerase II transcription factor B subunit 2
Genome locationchr08:1941347..1949250
RNA-Seq ExpressionIVF0002312
SyntenyIVF0002312
Gene Ontology termsGO:0006289 - nucleotide-excision repair (biological process)
GO:0070816 - phosphorylation of RNA polymerase II C-terminal domain (biological process)
GO:0000439 - transcription factor TFIIH core complex (cellular component)
GO:0005675 - transcription factor TFIIH holo complex (cellular component)
GO:0016021 - integral component of membrane (cellular component)
GO:0001671 - ATPase activator activity (molecular function)
GO:0003690 - double-stranded DNA binding (molecular function)
InterPro domainsIPR004598 - Transcription factor TFIIH subunit p52/Tfb2
IPR040662 - Transcription factor Tfb2, C-terminal domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6604444.1 General transcription and DNA repair factor IIH subunit TFB2, partial [Cucurbita argyrosperma subsp. sororia]0.097.12Show/hide
Query:  MPQVKIIAKNFMDMVASLPAMKLDQLYENAFICEAILRSLPPLAKKFVLQMLYIDAPVSAKSMEEWVLPDGVSKYKVAVDRLIQLRVFIETADRKRETTY
        MPQVKIIAKNFMDMVASLPAMKLDQLYENAFICEAILRSLPPLAKKFVLQMLYIDAPV+AKSMEEWVLPDGVSKYKVAVDRLIQLRVFIETADRKRETTY
Subjt:  MPQVKIIAKNFMDMVASLPAMKLDQLYENAFICEAILRSLPPLAKKFVLQMLYIDAPVSAKSMEEWVLPDGVSKYKVAVDRLIQLRVFIETADRKRETTY

Query:  RLNPTFQANLQKLLIHGEVVAREPMPSNITVRLPSLEDLEAYALDQWECFLLQLINSGQAEKPSNISSSVMKVFQKGLLSQRDKEAPRLTESGFQFLLME
        +LNPTFQANLQKLLIHGEV+AREPMPSNITVRLP+LE+LEAYALDQWECFLLQLINSGQA+KPSNISSSVMKVFQKGLLSQRDKE PRLTESGFQFLLME
Subjt:  RLNPTFQANLQKLLIHGEVVAREPMPSNITVRLPSLEDLEAYALDQWECFLLQLINSGQAEKPSNISSSVMKVFQKGLLSQRDKEAPRLTESGFQFLLME

Query:  TNAQLWYIIREYISNAEERGVDPADLISFLLELSFHVTGEAYDIDTLSDEQRYAIKDLADLGLVKLQQGRKESWFIPTKLATNLSMSLADSSSRKQGFVV
        TNAQLWYIIREYISNAEER VDPADLISFLLELSFHVTGEAYDIDTL++EQRYAIKDLADLGLVKLQQGRK+SWFIPTKLATNLSMSLADSSSRKQGFVV
Subjt:  TNAQLWYIIREYISNAEERGVDPADLISFLLELSFHVTGEAYDIDTLSDEQRYAIKDLADLGLVKLQQGRKESWFIPTKLATNLSMSLADSSSRKQGFVV

Query:  VETNFRMYAYSSSKLHCEILRLFSRIEYQLPNLIVGAITKESLYNAFKNGITAEQIVTFLQQNAHPRVAERIPSVPENVTDQIRLWESDLNRVDITPAHF
        VETNFRMYAYSSSKLHCEILRLFSRIEYQLPNLIVGAITKESLYNAFKNGITA+QIVTFLQQNAHPRVAERIPSVPENVTDQIRLWESDLNRVDITPAHF
Subjt:  VETNFRMYAYSSSKLHCEILRLFSRIEYQLPNLIVGAITKESLYNAFKNGITAEQIVTFLQQNAHPRVAERIPSVPENVTDQIRLWESDLNRVDITPAHF

Query:  YDEFPSREVFEAACDYAREWNGLLWEDSKNLRLVVKADIHTHMREHLRRQK
        YDEFPSREVFEAACDYAREWNGLLWEDSK LRLVVKADIHTHMREHLRRQK
Subjt:  YDEFPSREVFEAACDYAREWNGLLWEDSKNLRLVVKADIHTHMREHLRRQK

XP_004134713.1 general transcription and DNA repair factor IIH subunit TFB2 isoform X1 [Cucumis sativus]0.099.11Show/hide
Query:  MPQVKIIAKNFMDMVASLPAMKLDQLYENAFICEAILRSLPPLAKKFVLQMLYIDAPVSAKSMEEWVLPDGVSKYKVAVDRLIQLRVFIETADRKRETTY
        MPQVKIIAKNFMDMVASLPAMKLDQLYENAFICEAILRSLPPLAKKFVLQMLYID PVSAKSMEEWVLPDGVSKYKVAVDRLIQLRVFIETADRKRETTY
Subjt:  MPQVKIIAKNFMDMVASLPAMKLDQLYENAFICEAILRSLPPLAKKFVLQMLYIDAPVSAKSMEEWVLPDGVSKYKVAVDRLIQLRVFIETADRKRETTY

Query:  RLNPTFQANLQKLLIHGEVVAREPMPSNITVRLPSLEDLEAYALDQWECFLLQLINSGQAEKPSNISSSVMKVFQKGLLSQRDKEAPRLTESGFQFLLME
        RLNPTFQANLQKLLIHGEV+AREPMPSNITVRLPSLEDLEAYALDQWECFLLQLINSGQAEKPSNISSSVMKVFQKGLLSQRDKEAPRLTESGFQFLLME
Subjt:  RLNPTFQANLQKLLIHGEVVAREPMPSNITVRLPSLEDLEAYALDQWECFLLQLINSGQAEKPSNISSSVMKVFQKGLLSQRDKEAPRLTESGFQFLLME

Query:  TNAQLWYIIREYISNAEERGVDPADLISFLLELSFHVTGEAYDIDTLSDEQRYAIKDLADLGLVKLQQGRKESWFIPTKLATNLSMSLADSSSRKQGFVV
        TNAQLWYIIREYISNAEERGVDPADLISFLLELSFHVTGEAYDIDTLSDEQRYAIKDLADLGLVKLQQGRKESWFIPTKLATNLSMSLADSSSRK GFVV
Subjt:  TNAQLWYIIREYISNAEERGVDPADLISFLLELSFHVTGEAYDIDTLSDEQRYAIKDLADLGLVKLQQGRKESWFIPTKLATNLSMSLADSSSRKQGFVV

Query:  VETNFRMYAYSSSKLHCEILRLFSRIEYQLPNLIVGAITKESLYNAFKNGITAEQIVTFLQQNAHPRVAERIPSVPENVTDQIRLWESDLNRVDITPAHF
        VETNFRMYAYS+SKLHCEILRLFSRIEYQLPNLIVGAITKESLYNAFKNGITAEQIVTFLQQNAHPRVAERIPSVPENVTDQIRLWESDLNRVDITPAHF
Subjt:  VETNFRMYAYSSSKLHCEILRLFSRIEYQLPNLIVGAITKESLYNAFKNGITAEQIVTFLQQNAHPRVAERIPSVPENVTDQIRLWESDLNRVDITPAHF

Query:  YDEFPSREVFEAACDYAREWNGLLWEDSKNLRLVVKADIHTHMREHLRRQK
        YDEFPSREVFEAACDYAREWNGLLWEDSKNLRLVVKADIHTHMREHLRRQK
Subjt:  YDEFPSREVFEAACDYAREWNGLLWEDSKNLRLVVKADIHTHMREHLRRQK

XP_022977542.1 RNA polymerase II transcription factor B subunit 2 [Cucurbita maxima]0.097.34Show/hide
Query:  MPQVKIIAKNFMDMVASLPAMKLDQLYENAFICEAILRSLPPLAKKFVLQMLYIDAPVSAKSMEEWVLPDGVSKYKVAVDRLIQLRVFIETADRKRETTY
        MPQVKIIAKNFMDMVASLPAMKLDQLYENAFICEAILRSLPPLAKKFVLQMLYIDAPV+AKSMEEWVLPDGVSKYKVAVDRLIQLRVFIETADRKRETTY
Subjt:  MPQVKIIAKNFMDMVASLPAMKLDQLYENAFICEAILRSLPPLAKKFVLQMLYIDAPVSAKSMEEWVLPDGVSKYKVAVDRLIQLRVFIETADRKRETTY

Query:  RLNPTFQANLQKLLIHGEVVAREPMPSNITVRLPSLEDLEAYALDQWECFLLQLINSGQAEKPSNISSSVMKVFQKGLLSQRDKEAPRLTESGFQFLLME
        +LNPTFQANLQKLLIHGEV+AREPMPSNITVRLP+LE+LEAYALDQWECFLLQLINSGQA+KPSNISSSVMKVFQKGLLSQRDKE PRLTESGFQFLLME
Subjt:  RLNPTFQANLQKLLIHGEVVAREPMPSNITVRLPSLEDLEAYALDQWECFLLQLINSGQAEKPSNISSSVMKVFQKGLLSQRDKEAPRLTESGFQFLLME

Query:  TNAQLWYIIREYISNAEERGVDPADLISFLLELSFHVTGEAYDIDTLSDEQRYAIKDLADLGLVKLQQGRKESWFIPTKLATNLSMSLADSSSRKQGFVV
        TNAQLWYIIREYISNAEERGVDPADLISFLLELSFHVTGEAYDIDTL++EQRYAIKDLADLGLVKLQQGRK+SWFIPTKLATNLSMSLADSSSRKQGFVV
Subjt:  TNAQLWYIIREYISNAEERGVDPADLISFLLELSFHVTGEAYDIDTLSDEQRYAIKDLADLGLVKLQQGRKESWFIPTKLATNLSMSLADSSSRKQGFVV

Query:  VETNFRMYAYSSSKLHCEILRLFSRIEYQLPNLIVGAITKESLYNAFKNGITAEQIVTFLQQNAHPRVAERIPSVPENVTDQIRLWESDLNRVDITPAHF
        VETNFRMYAYSSSKLHCEILRLFSRIEYQLPNLIVGAITKESLYNAFKNGITA+QIVTFLQQNAHPRVAERIPSVPENVTDQIRLWESDLNRVDITPAHF
Subjt:  VETNFRMYAYSSSKLHCEILRLFSRIEYQLPNLIVGAITKESLYNAFKNGITAEQIVTFLQQNAHPRVAERIPSVPENVTDQIRLWESDLNRVDITPAHF

Query:  YDEFPSREVFEAACDYAREWNGLLWEDSKNLRLVVKADIHTHMREHLRRQK
        YDEFPSREVFEAACDYAREWNGLLWEDSK LRLVVKADIHTHMREHLRRQK
Subjt:  YDEFPSREVFEAACDYAREWNGLLWEDSKNLRLVVKADIHTHMREHLRRQK

XP_023543805.1 RNA polymerase II transcription factor B subunit 2 [Cucurbita pepo subsp. pepo]0.097.12Show/hide
Query:  MPQVKIIAKNFMDMVASLPAMKLDQLYENAFICEAILRSLPPLAKKFVLQMLYIDAPVSAKSMEEWVLPDGVSKYKVAVDRLIQLRVFIETADRKRETTY
        MPQVKIIAKNFMDMVASLPAMKLDQLYENAFICEAILRSLPPLAKKFVLQMLYIDAPV+AKSMEEWVLPDGVSKYKVAVDRLIQLRVFIETADRKRETTY
Subjt:  MPQVKIIAKNFMDMVASLPAMKLDQLYENAFICEAILRSLPPLAKKFVLQMLYIDAPVSAKSMEEWVLPDGVSKYKVAVDRLIQLRVFIETADRKRETTY

Query:  RLNPTFQANLQKLLIHGEVVAREPMPSNITVRLPSLEDLEAYALDQWECFLLQLINSGQAEKPSNISSSVMKVFQKGLLSQRDKEAPRLTESGFQFLLME
        +LNPTFQANLQKLLIHGEV+AREPMPSNITVRLP+LE+LEAYALDQWECFLLQLINSGQA+KPSNISSSVMKVFQKGLLSQRDKE PRLTESGFQFLLME
Subjt:  RLNPTFQANLQKLLIHGEVVAREPMPSNITVRLPSLEDLEAYALDQWECFLLQLINSGQAEKPSNISSSVMKVFQKGLLSQRDKEAPRLTESGFQFLLME

Query:  TNAQLWYIIREYISNAEERGVDPADLISFLLELSFHVTGEAYDIDTLSDEQRYAIKDLADLGLVKLQQGRKESWFIPTKLATNLSMSLADSSSRKQGFVV
        TNAQLWYIIREYISNAEER VDPADLISFLLELSFHVTGEAYDIDTL++EQRYAIKDLADLGLVKLQQGRK+SWFIPTKLATNLSMSLADSSSRKQGFVV
Subjt:  TNAQLWYIIREYISNAEERGVDPADLISFLLELSFHVTGEAYDIDTLSDEQRYAIKDLADLGLVKLQQGRKESWFIPTKLATNLSMSLADSSSRKQGFVV

Query:  VETNFRMYAYSSSKLHCEILRLFSRIEYQLPNLIVGAITKESLYNAFKNGITAEQIVTFLQQNAHPRVAERIPSVPENVTDQIRLWESDLNRVDITPAHF
        VETNFRMYAYSSSKLHCEILRLFSRIEYQLPNLIVGAITKESLYNAFKNGITA+QIVTFLQQNAHPRVAERIPSVPENVTDQIRLWESDLNRVDITPAHF
Subjt:  VETNFRMYAYSSSKLHCEILRLFSRIEYQLPNLIVGAITKESLYNAFKNGITAEQIVTFLQQNAHPRVAERIPSVPENVTDQIRLWESDLNRVDITPAHF

Query:  YDEFPSREVFEAACDYAREWNGLLWEDSKNLRLVVKADIHTHMREHLRRQK
        YDEFPSREVFEAACDYAREWNGLLWEDSK LRLVVKADIHTHMREHLRRQK
Subjt:  YDEFPSREVFEAACDYAREWNGLLWEDSKNLRLVVKADIHTHMREHLRRQK

XP_038882460.1 general transcription and DNA repair factor IIH subunit TFB2 isoform X1 [Benincasa hispida]0.097.78Show/hide
Query:  MPQVKIIAKNFMDMVASLPAMKLDQLYENAFICEAILRSLPPLAKKFVLQMLYIDAPVSAKSMEEWVLPDGVSKYKVAVDRLIQLRVFIETADRKRETTY
        MPQVKIIAKNFMDMVASLP MKLDQLYENAFICEAILRSLPPLAKKFVLQMLYIDAPVSAKSMEEWVLPDGVSKYKVAVDRLIQLRVFIETADRKRETTY
Subjt:  MPQVKIIAKNFMDMVASLPAMKLDQLYENAFICEAILRSLPPLAKKFVLQMLYIDAPVSAKSMEEWVLPDGVSKYKVAVDRLIQLRVFIETADRKRETTY

Query:  RLNPTFQANLQKLLIHGEVVAREPMPSNITVRLPSLEDLEAYALDQWECFLLQLINSGQAEKPSNISSSVMKVFQKGLLSQRDKEAPRLTESGFQFLLME
        RLNP FQANLQKLLIHGEV+AREPMP+NITVRLPSLE+L+AYALDQWECFLLQLINSGQAEKPSNISSSVMKVFQKGLLSQRDKEAPRLTESGFQFLLME
Subjt:  RLNPTFQANLQKLLIHGEVVAREPMPSNITVRLPSLEDLEAYALDQWECFLLQLINSGQAEKPSNISSSVMKVFQKGLLSQRDKEAPRLTESGFQFLLME

Query:  TNAQLWYIIREYISNAEERGVDPADLISFLLELSFHVTGEAYDIDTLSDEQRYAIKDLADLGLVKLQQGRKESWFIPTKLATNLSMSLADSSSRKQGFVV
        TNAQLWYIIREYISNAEERGVDPADLISFLLELSFHVTGEAYDIDTL+DEQRYAIKDLADLGLVKLQQGRK+SWFIPTKLATNLSMSLADSSSRKQGFVV
Subjt:  TNAQLWYIIREYISNAEERGVDPADLISFLLELSFHVTGEAYDIDTLSDEQRYAIKDLADLGLVKLQQGRKESWFIPTKLATNLSMSLADSSSRKQGFVV

Query:  VETNFRMYAYSSSKLHCEILRLFSRIEYQLPNLIVGAITKESLYNAFKNGITAEQIVTFLQQNAHPRVAERIPSVPENVTDQIRLWESDLNRVDITPAHF
        VETNFRMYAYSSSKLHCEILRLFSRIEYQLPNLIVGAITKESLYNAFKNGITAEQIVTFLQQNAHPRVAERIPSVPENVTDQIRLWESDLNRVDITPAHF
Subjt:  VETNFRMYAYSSSKLHCEILRLFSRIEYQLPNLIVGAITKESLYNAFKNGITAEQIVTFLQQNAHPRVAERIPSVPENVTDQIRLWESDLNRVDITPAHF

Query:  YDEFPSREVFEAACDYAREWNGLLWEDSKNLRLVVKADIHTHMREHLRRQK
        YDEFPSREVFEAACDYAREWNGLLWED KN+RLVVKADIHTHMREHLRRQK
Subjt:  YDEFPSREVFEAACDYAREWNGLLWEDSKNLRLVVKADIHTHMREHLRRQK

TrEMBL top hitse value%identityAlignment
A0A0A0KK55 RNA polymerase II transcription factor B subunit 22.3e-25499.11Show/hide
Query:  MPQVKIIAKNFMDMVASLPAMKLDQLYENAFICEAILRSLPPLAKKFVLQMLYIDAPVSAKSMEEWVLPDGVSKYKVAVDRLIQLRVFIETADRKRETTY
        MPQVKIIAKNFMDMVASLPAMKLDQLYENAFICEAILRSLPPLAKKFVLQMLYID PVSAKSMEEWVLPDGVSKYKVAVDRLIQLRVFIETADRKRETTY
Subjt:  MPQVKIIAKNFMDMVASLPAMKLDQLYENAFICEAILRSLPPLAKKFVLQMLYIDAPVSAKSMEEWVLPDGVSKYKVAVDRLIQLRVFIETADRKRETTY

Query:  RLNPTFQANLQKLLIHGEVVAREPMPSNITVRLPSLEDLEAYALDQWECFLLQLINSGQAEKPSNISSSVMKVFQKGLLSQRDKEAPRLTESGFQFLLME
        RLNPTFQANLQKLLIHGEV+AREPMPSNITVRLPSLEDLEAYALDQWECFLLQLINSGQAEKPSNISSSVMKVFQKGLLSQRDKEAPRLTESGFQFLLME
Subjt:  RLNPTFQANLQKLLIHGEVVAREPMPSNITVRLPSLEDLEAYALDQWECFLLQLINSGQAEKPSNISSSVMKVFQKGLLSQRDKEAPRLTESGFQFLLME

Query:  TNAQLWYIIREYISNAEERGVDPADLISFLLELSFHVTGEAYDIDTLSDEQRYAIKDLADLGLVKLQQGRKESWFIPTKLATNLSMSLADSSSRKQGFVV
        TNAQLWYIIREYISNAEERGVDPADLISFLLELSFHVTGEAYDIDTLSDEQRYAIKDLADLGLVKLQQGRKESWFIPTKLATNLSMSLADSSSRK GFVV
Subjt:  TNAQLWYIIREYISNAEERGVDPADLISFLLELSFHVTGEAYDIDTLSDEQRYAIKDLADLGLVKLQQGRKESWFIPTKLATNLSMSLADSSSRKQGFVV

Query:  VETNFRMYAYSSSKLHCEILRLFSRIEYQLPNLIVGAITKESLYNAFKNGITAEQIVTFLQQNAHPRVAERIPSVPENVTDQIRLWESDLNRVDITPAHF
        VETNFRMYAYS+SKLHCEILRLFSRIEYQLPNLIVGAITKESLYNAFKNGITAEQIVTFLQQNAHPRVAERIPSVPENVTDQIRLWESDLNRVDITPAHF
Subjt:  VETNFRMYAYSSSKLHCEILRLFSRIEYQLPNLIVGAITKESLYNAFKNGITAEQIVTFLQQNAHPRVAERIPSVPENVTDQIRLWESDLNRVDITPAHF

Query:  YDEFPSREVFEAACDYAREWNGLLWEDSKNLRLVVKADIHTHMREHLRRQK
        YDEFPSREVFEAACDYAREWNGLLWEDSKNLRLVVKADIHTHMREHLRRQK
Subjt:  YDEFPSREVFEAACDYAREWNGLLWEDSKNLRLVVKADIHTHMREHLRRQK

A0A5A7UBE2 RNA polymerase II transcription factor B subunit 23.9e-24194.32Show/hide
Query:  MPQVKIIAKNFMDMVASLPAMKLDQLYENAFICEAILRSLPPLAKKFVLQMLYIDAPVSAKSMEEWVLPDGVSKYKVAVDRLIQLRVFIETADRKRETTY
        MPQVKIIAKNFMDMVASLPAMKLDQLYENAFICEAILRSLPPLAKKFVLQMLYIDAPVSAKSMEEWVLPDGVSKYKVAVDRLIQLRVFIETADRKRETTY
Subjt:  MPQVKIIAKNFMDMVASLPAMKLDQLYENAFICEAILRSLPPLAKKFVLQMLYIDAPVSAKSMEEWVLPDGVSKYKVAVDRLIQLRVFIETADRKRETTY

Query:  RLNPTFQANLQKLLIHGEVVAREPMPSNITVRLPSLEDLEAYALDQWECFLLQLINSGQAEKPSNISSSVMKVFQKGLLSQ-------------------
        RLNPTFQANLQKLLIHGEV+AREPMPSNITVRLPSLEDLEAYALDQWECFLLQLINSGQAEKPSNISSSVMKVFQKGLLSQ                   
Subjt:  RLNPTFQANLQKLLIHGEVVAREPMPSNITVRLPSLEDLEAYALDQWECFLLQLINSGQAEKPSNISSSVMKVFQKGLLSQ-------------------

Query:  ------RDKEAPRLTESGFQFLLMETNAQLWYIIREYISNAEERGVDPADLISFLLELSFHVTGEAYDIDTLSDEQRYAIKDLADLGLVKLQQGRKESWF
              RDKEAPRLTESGFQFLLMETNAQLWYIIREYISNAEERGVDPADLISFLLELSFHVTGEAYDIDTLSDEQRYAIKDLADLGLVKLQQGRKESWF
Subjt:  ------RDKEAPRLTESGFQFLLMETNAQLWYIIREYISNAEERGVDPADLISFLLELSFHVTGEAYDIDTLSDEQRYAIKDLADLGLVKLQQGRKESWF

Query:  IPTKLATNLSMSLADSSSRKQGFVVVETNFRMYAYSSSKLHCEILRLFSRIEYQLPNLIVGAITKESLYNAFKNGITAEQIVTFLQQNAHPRVAERIPSV
        IPTKLATNLSMSLADSSSRKQGFVVVETNFRMYAYSSSKLHCEILRLFSRIEYQLPNLIVGAITKESLYNAFKNGITAEQIVTFLQQNAHPRVAERIPSV
Subjt:  IPTKLATNLSMSLADSSSRKQGFVVVETNFRMYAYSSSKLHCEILRLFSRIEYQLPNLIVGAITKESLYNAFKNGITAEQIVTFLQQNAHPRVAERIPSV

Query:  PENVTDQIRLWESDLNRVDITPAHFYDEFPSREVFEAACDYAREWNGLLWEDSKNLRL
        PENVTDQIRLWESDLNRVDITPAHFYDEFPSREVFEAACDYAREWNGLLWEDSKNLRL
Subjt:  PENVTDQIRLWESDLNRVDITPAHFYDEFPSREVFEAACDYAREWNGLLWEDSKNLRL

A0A6J1CK16 RNA polymerase II transcription factor B subunit 21.7e-24489Show/hide
Query:  MPQVKIIAKNFMDMVASLPAMKLDQLYENAFICEAILRSLPPLAKKFVLQMLYIDAPVSAKSMEEWVLPDGVSKYKVAVDRLIQLRVFIETADRKRETTY
        MPQVKIIAKNFMDMVASLPAMKLD LYENAFICEAILRSLPPLAKKFVLQMLYI+APV+AKSMEEWVL DGVSKYKVA+DRLIQLRVFIETADRKRETTY
Subjt:  MPQVKIIAKNFMDMVASLPAMKLDQLYENAFICEAILRSLPPLAKKFVLQMLYIDAPVSAKSMEEWVLPDGVSKYKVAVDRLIQLRVFIETADRKRETTY

Query:  RLNPTFQANLQKLLIHGEVVAREPMPSNITVRLPSLEDLEAYALDQWECFLLQLINSGQAEKPSNISSSVMKVFQKGLLSQRDKEAPRLTESGFQFLLME
        RLNPTFQANLQKLLI+GEV+AREPMPSNITVRLPSLEDLEAYALDQWECFLLQLINSGQAEKPSNISSSVMKVFQKGLLSQRDKEAPRLTESGFQFLLME
Subjt:  RLNPTFQANLQKLLIHGEVVAREPMPSNITVRLPSLEDLEAYALDQWECFLLQLINSGQAEKPSNISSSVMKVFQKGLLSQRDKEAPRLTESGFQFLLME

Query:  TNAQLWYIIREYISNAEERGVDPADLISFLLELSFHVTGE----------------------------------------AYDIDTLSDEQRYAIKDLAD
        TNAQLWYIIREYISN+EERGVDPADLISFLLELSFHVTGE                                        AYDIDTL++EQRYAIKDLAD
Subjt:  TNAQLWYIIREYISNAEERGVDPADLISFLLELSFHVTGE----------------------------------------AYDIDTLSDEQRYAIKDLAD

Query:  LGLVKLQQGRKESWFIPTKLATNLSMSLADSSSRKQGFVVVETNFRMYAYSSSKLHCEILRLFSRIEYQLPNLIVGAITKESLYNAFKNGITAEQIVTFL
        LGLVKLQQGRK+SWFIPTKLATNLSMSLADSSSRKQGFVVVETNFRMYAYSSS+LHCEILRLFSRIEYQLPNLIVGAITKESLYNAFKNGITAEQIVTFL
Subjt:  LGLVKLQQGRKESWFIPTKLATNLSMSLADSSSRKQGFVVVETNFRMYAYSSSKLHCEILRLFSRIEYQLPNLIVGAITKESLYNAFKNGITAEQIVTFL

Query:  QQNAHPRVAERIPSVPENVTDQIRLWESDLNRVDITPAHFYDEFPSREVFEAACDYAREWNGLLWEDSKNLRLVVKADIHTHMREHLRRQK
        QQNAHPRVAERIPSVPENVTDQIRLWESDLNRVDITPAHFYDEFPSREVFEAACDYAREWNGLLWEDSKN+RLVVKAD+HTHMREHLRRQK
Subjt:  QQNAHPRVAERIPSVPENVTDQIRLWESDLNRVDITPAHFYDEFPSREVFEAACDYAREWNGLLWEDSKNLRLVVKADIHTHMREHLRRQK

A0A6J1EGA7 RNA polymerase II transcription factor B subunit 26.6e-24996.67Show/hide
Query:  MPQVKIIAKNFMDMVASLPAMKLDQLYENAFICEAILRSLPPLAKKFVLQMLYIDAPVSAKSMEEWVLPDGVSKYKVAVDRLIQLRVFIETADRKRETTY
        MPQVKIIAKNFMDMVASLPAMKLDQLY NAFICEAILRSLPPLAKKFVLQMLYIDAPV+AKSMEEWVLPDGVSKYKVAVDRLIQLRVFIETADRKRETTY
Subjt:  MPQVKIIAKNFMDMVASLPAMKLDQLYENAFICEAILRSLPPLAKKFVLQMLYIDAPVSAKSMEEWVLPDGVSKYKVAVDRLIQLRVFIETADRKRETTY

Query:  RLNPTFQANLQKLLIHGEVVAREPMPSNITVRLPSLEDLEAYALDQWECFLLQLINSGQAEKPSNISSSVMKVFQKGLLSQRDKEAPRLTESGFQFLLME
        +LNPTFQANLQKLLI GEV+AREPMPSNITVRLP+LE+LEAYALDQWECFLLQLINSGQA+KPSNISSSVMKVFQKGLLSQRDKE PRLTESGFQFLLME
Subjt:  RLNPTFQANLQKLLIHGEVVAREPMPSNITVRLPSLEDLEAYALDQWECFLLQLINSGQAEKPSNISSSVMKVFQKGLLSQRDKEAPRLTESGFQFLLME

Query:  TNAQLWYIIREYISNAEERGVDPADLISFLLELSFHVTGEAYDIDTLSDEQRYAIKDLADLGLVKLQQGRKESWFIPTKLATNLSMSLADSSSRKQGFVV
        TNAQLWYIIREYISNAEER VDPADLISFLLELSFHVTGEAYDIDTL++EQRYAIKDLADLGLVKLQQGRK+SWFIPTKLATNLSMSLADSSSRKQGFVV
Subjt:  TNAQLWYIIREYISNAEERGVDPADLISFLLELSFHVTGEAYDIDTLSDEQRYAIKDLADLGLVKLQQGRKESWFIPTKLATNLSMSLADSSSRKQGFVV

Query:  VETNFRMYAYSSSKLHCEILRLFSRIEYQLPNLIVGAITKESLYNAFKNGITAEQIVTFLQQNAHPRVAERIPSVPENVTDQIRLWESDLNRVDITPAHF
        VETNFRMYAYSSSKLHCEILRLFSRIEYQLPNLIVGAITKESLYNAFKNGITA+QIVTFLQQNAHPRVAERIPSVPENVTDQIRLWESDLNRVDITPAHF
Subjt:  VETNFRMYAYSSSKLHCEILRLFSRIEYQLPNLIVGAITKESLYNAFKNGITAEQIVTFLQQNAHPRVAERIPSVPENVTDQIRLWESDLNRVDITPAHF

Query:  YDEFPSREVFEAACDYAREWNGLLWEDSKNLRLVVKADIHTHMREHLRRQK
        YDEFPSREVFEAACDYAREWNGLLWEDSK LRLVVKADIHTHMREHLRRQK
Subjt:  YDEFPSREVFEAACDYAREWNGLLWEDSKNLRLVVKADIHTHMREHLRRQK

A0A6J1IIT5 RNA polymerase II transcription factor B subunit 21.9e-25197.34Show/hide
Query:  MPQVKIIAKNFMDMVASLPAMKLDQLYENAFICEAILRSLPPLAKKFVLQMLYIDAPVSAKSMEEWVLPDGVSKYKVAVDRLIQLRVFIETADRKRETTY
        MPQVKIIAKNFMDMVASLPAMKLDQLYENAFICEAILRSLPPLAKKFVLQMLYIDAPV+AKSMEEWVLPDGVSKYKVAVDRLIQLRVFIETADRKRETTY
Subjt:  MPQVKIIAKNFMDMVASLPAMKLDQLYENAFICEAILRSLPPLAKKFVLQMLYIDAPVSAKSMEEWVLPDGVSKYKVAVDRLIQLRVFIETADRKRETTY

Query:  RLNPTFQANLQKLLIHGEVVAREPMPSNITVRLPSLEDLEAYALDQWECFLLQLINSGQAEKPSNISSSVMKVFQKGLLSQRDKEAPRLTESGFQFLLME
        +LNPTFQANLQKLLIHGEV+AREPMPSNITVRLP+LE+LEAYALDQWECFLLQLINSGQA+KPSNISSSVMKVFQKGLLSQRDKE PRLTESGFQFLLME
Subjt:  RLNPTFQANLQKLLIHGEVVAREPMPSNITVRLPSLEDLEAYALDQWECFLLQLINSGQAEKPSNISSSVMKVFQKGLLSQRDKEAPRLTESGFQFLLME

Query:  TNAQLWYIIREYISNAEERGVDPADLISFLLELSFHVTGEAYDIDTLSDEQRYAIKDLADLGLVKLQQGRKESWFIPTKLATNLSMSLADSSSRKQGFVV
        TNAQLWYIIREYISNAEERGVDPADLISFLLELSFHVTGEAYDIDTL++EQRYAIKDLADLGLVKLQQGRK+SWFIPTKLATNLSMSLADSSSRKQGFVV
Subjt:  TNAQLWYIIREYISNAEERGVDPADLISFLLELSFHVTGEAYDIDTLSDEQRYAIKDLADLGLVKLQQGRKESWFIPTKLATNLSMSLADSSSRKQGFVV

Query:  VETNFRMYAYSSSKLHCEILRLFSRIEYQLPNLIVGAITKESLYNAFKNGITAEQIVTFLQQNAHPRVAERIPSVPENVTDQIRLWESDLNRVDITPAHF
        VETNFRMYAYSSSKLHCEILRLFSRIEYQLPNLIVGAITKESLYNAFKNGITA+QIVTFLQQNAHPRVAERIPSVPENVTDQIRLWESDLNRVDITPAHF
Subjt:  VETNFRMYAYSSSKLHCEILRLFSRIEYQLPNLIVGAITKESLYNAFKNGITAEQIVTFLQQNAHPRVAERIPSVPENVTDQIRLWESDLNRVDITPAHF

Query:  YDEFPSREVFEAACDYAREWNGLLWEDSKNLRLVVKADIHTHMREHLRRQK
        YDEFPSREVFEAACDYAREWNGLLWEDSK LRLVVKADIHTHMREHLRRQK
Subjt:  YDEFPSREVFEAACDYAREWNGLLWEDSKNLRLVVKADIHTHMREHLRRQK

SwissProt top hitse value%identityAlignment
O70422 General transcription factor IIH subunit 41.5e-6934.45Show/hide
Query:  KNFMDMVASLPAMKLDQLYENAFICEAILRSLPPLAKKFVLQMLYIDAPVSAKSMEEWVLPDGVSKYKVAVDRLIQLRVFIETADRKRETTYRLNPTFQA
        +N  + +  L    LD+LY +   C A+ R LP LAK +V++ML+++ P+   ++  WV  +     + +   L  LR++             LNP F+ 
Subjt:  KNFMDMVASLPAMKLDQLYENAFICEAILRSLPPLAKKFVLQMLYIDAPVSAKSMEEWVLPDGVSKYKVAVDRLIQLRVFIETADRKRETTYRLNPTFQA

Query:  NLQ-KLLIHGEVVAREPMPSNITVRLPSLEDLEAYALDQWECFLLQLINSGQAEKPSNISSSVMKVFQKGLL-SQRDKEAPRLTESGFQFLLMETNAQLW
        NL+  LL  G+  + +            +  L+ YA ++WE  L  ++ S  A    +++  +    Q GL+ S    E P +T +GFQFLL++T AQLW
Subjt:  NLQ-KLLIHGEVVAREPMPSNITVRLPSLEDLEAYALDQWECFLLQLINSGQAEKPSNISSSVMKVFQKGLL-SQRDKEAPRLTESGFQFLLMETNAQLW

Query:  YIIREYISNAEERGVDPADLISFLLELSFHVTGEAYDIDTLSDEQRYAIKDLADLGLVKLQQGRKESWFIPTKLATNLS--MSLADSSSRKQGFVVVETN
        Y + +Y+  A+ RG+D  +++SFL +LSF   G+ Y ++ +SD     ++ L + GLV  Q+ RK   + PT+LA NLS  +S A  +  + GF+VVETN
Subjt:  YIIREYISNAEERGVDPADLISFLLELSFHVTGEAYDIDTLSDEQRYAIKDLADLGLVKLQQGRKESWFIPTKLATNLS--MSLADSSSRKQGFVVVETN

Query:  FRMYAYSSSKLHCEILRLFSRIEYQLPNLIVGAITKESLYNAFKNGITAEQIVTFLQQNAHPRVAERIPSVPENVTDQIRLWESDLNRVDITPAHFYDEF
        +R+YAY+ S+L   ++ LFS + Y+ PN++V  +T+ES+  A  +GITA+QI+ FL+  AHP + ++ P +P  +TDQIRLWE + +R+  T    Y++F
Subjt:  FRMYAYSSSKLHCEILRLFSRIEYQLPNLIVGAITKESLYNAFKNGITAEQIVTFLQQNAHPRVAERIPSVPENVTDQIRLWESDLNRVDITPAHFYDEF

Query:  PSREVFEAACDYAREWNGLLWEDSKNLRLVVKADIHTHMREHLRRQK
         S+  FE    +ARE   L++E+S    +VV    H+ ++   +RQK
Subjt:  PSREVFEAACDYAREWNGLLWEDSKNLRLVVKADIHTHMREHLRRQK

P60027 General transcription factor IIH subunit 46.9e-7034.22Show/hide
Query:  QVKIIAKNFMDMVASLPAMKLDQLYENAFICEAILRSLPPLAKKFVLQMLYIDAPVSAKSMEEWVLPDGVSKYKVAVDRLIQLRVFIETADRKRETTYRL
        +V +  +N  + +  L    LD+LY +   C A+ R LP LAK +V++ML+++ P+   ++  WV  +     + +   L  LR++             L
Subjt:  QVKIIAKNFMDMVASLPAMKLDQLYENAFICEAILRSLPPLAKKFVLQMLYIDAPVSAKSMEEWVLPDGVSKYKVAVDRLIQLRVFIETADRKRETTYRL

Query:  NPTFQANLQ-KLLIHGEVVAREPMPSNITVRLPSLEDLEAYALDQWECFLLQLINSGQAEKPSNISSSVMKVFQKGLL-SQRDKEAPRLTESGFQFLLME
        NP F+ NL+  LL  G+  + +            +  L+ YA ++WE  L  ++ S  A    +++  +    Q GL+ S    E P +T +GFQFLL++
Subjt:  NPTFQANLQ-KLLIHGEVVAREPMPSNITVRLPSLEDLEAYALDQWECFLLQLINSGQAEKPSNISSSVMKVFQKGLL-SQRDKEAPRLTESGFQFLLME

Query:  TNAQLWYIIREYISNAEERGVDPADLISFLLELSFHVTGEAYDIDTLSDEQRYAIKDLADLGLVKLQQGRKESWFIPTKLATNLS--MSLADSSSRKQGF
        T AQLWY + +Y+  A+ RG+D  +++SFL +LSF   G+ Y ++ +SD     ++ L + GLV  Q+ RK   + PT+LA NLS  +S A  +  + GF
Subjt:  TNAQLWYIIREYISNAEERGVDPADLISFLLELSFHVTGEAYDIDTLSDEQRYAIKDLADLGLVKLQQGRKESWFIPTKLATNLS--MSLADSSSRKQGF

Query:  VVVETNFRMYAYSSSKLHCEILRLFSRIEYQLPNLIVGAITKESLYNAFKNGITAEQIVTFLQQNAHPRVAERIPSVPENVTDQIRLWESDLNRVDITPA
        +VVETN+R+YAY+ S+L   ++ LFS + Y+ PN++V  +T+ES+  A  +GITA+QI+ FL+  AHP + ++ P +P  +TDQIRLWE + +R+  T  
Subjt:  VVVETNFRMYAYSSSKLHCEILRLFSRIEYQLPNLIVGAITKESLYNAFKNGITAEQIVTFLQQNAHPRVAERIPSVPENVTDQIRLWESDLNRVDITPA

Query:  HFYDEFPSREVFEAACDYAREWNGLLWEDSKNLRLVVKADIHTHMREHLRRQK
          Y++F S+  FE    +ARE   L++E+S    +VV    H+ ++   +RQK
Subjt:  HFYDEFPSREVFEAACDYAREWNGLLWEDSKNLRLVVKADIHTHMREHLRRQK

Q680U9 General transcription and DNA repair factor IIH subunit TFB23.5e-20777.78Show/hide
Query:  MPQVKIIAKNFMDMVASLPAMKLDQLYENAFICEAILRSLPPLAKKFVLQMLYIDAPVSAKSMEEWVLPDGVSKYKVAVDRLIQLRVFIETADRKRETTY
        MPQVKIIAKNFMDMVASLPA+KLD+LY N FICEAILRSLPPLAKK+VLQMLYID PV A  MEEWVL DG SK++VA+DRLIQLR+F E +DRKR T+Y
Subjt:  MPQVKIIAKNFMDMVASLPAMKLDQLYENAFICEAILRSLPPLAKKFVLQMLYIDAPVSAKSMEEWVLPDGVSKYKVAVDRLIQLRVFIETADRKRETTY

Query:  RLNPTFQANLQKLLIHGEVVAREPMPSNITVRLPSLEDLEAYALDQWECFLLQLINSGQAEKPSNISSSVMKVFQKGLLSQRDKEAPRLTESGFQFLLME
         LNPTFQ NLQK +I G V+ REPM S+  ++LPSL++LE YAL QWECFLLQLINSGQ EK + ISSS+MK+FQ+GLLSQRDK+ PRLTESGFQFLLM+
Subjt:  RLNPTFQANLQKLLIHGEVVAREPMPSNITVRLPSLEDLEAYALDQWECFLLQLINSGQAEKPSNISSSVMKVFQKGLLSQRDKEAPRLTESGFQFLLME

Query:  TNAQLWYIIREYISNAEERGVDPADLISFLLELSFHVTGEAYDIDTLSDEQRYAIKDLADLGLVKLQQGRKESWFIPTKLATNLSMSLADSSSRKQGFVV
        TNAQLWYIIREYI NAEER VDPADLISFLLELSFHVTG+AY+++TL++ Q   +KDLADLGLVKLQQGRK+SWFIPTKLATNLS+SLADSS+RK+GFVV
Subjt:  TNAQLWYIIREYISNAEERGVDPADLISFLLELSFHVTGEAYDIDTLSDEQRYAIKDLADLGLVKLQQGRKESWFIPTKLATNLSMSLADSSSRKQGFVV

Query:  VETNFRMYAYSSSKLHCEILRLFSRIEYQLPNLIVGAITKESLYNAFKNGITAEQIVTFLQQNAHPRVAERIPSVPENVTDQIRLWESDLNRVDITPAHF
        +ETNFRMYAYS+SKL CEILRLF+RIEYQLPNLI  AITKESLYNAF NGIT++QI+TFLQQN+HPR A+R+PS+PENVTDQIRLWE+DL R+++T AHF
Subjt:  VETNFRMYAYSSSKLHCEILRLFSRIEYQLPNLIVGAITKESLYNAFKNGITAEQIVTFLQQNAHPRVAERIPSVPENVTDQIRLWESDLNRVDITPAHF

Query:  YDEFPSREVFEAACDYAREWNGLLWEDSKNLRLVVKADIHTHMREHLRRQ
        YDEFPS++VFEAACD+AREW GLLWEDSK +RLVVK+++H  MRE L  Q
Subjt:  YDEFPSREVFEAACDYAREWNGLLWEDSKNLRLVVKADIHTHMREHLRRQ

Q6CLR2 General transcription and DNA repair factor IIH subunit TFB26.7e-6530.86Show/hide
Query:  DMVASLPAMKLDQLYENAFICEAILRSLPPLAKKFVLQMLYIDAPVSAKSMEEWVLPDGVSKYKVAVDRLIQLRVFIETADRKRETTYRLNPTFQANLQK
        D +  LP     +LYE+   C AI R L P+AK F++ ML+ D  VS + +++WV PD   + + ++  +  L + IE  + K+    RLNP F+ + + 
Subjt:  DMVASLPAMKLDQLYENAFICEAILRSLPPLAKKFVLQMLYIDAPVSAKSMEEWVLPDGVSKYKVAVDRLIQLRVFIETADRKRETTYRLNPTFQANLQK

Query:  LLIHGEVVAREPMPSNITVRLPSLEDLEAYALDQWECFLLQLINSGQAEKPSNISSSVMKVFQ-KGLLSQRDKEAPRLTESGFQFLLMETNAQLWYIIRE
        +L  GE+       ++      S   L+ Y+ ++WE  L  ++ +     P      V+ + Q  GL+ + +    ++T  GFQFLL + NAQ+W ++ +
Subjt:  LLIHGEVVAREPMPSNITVRLPSLEDLEAYALDQWECFLLQLINSGQAEKPSNISSSVMKVFQ-KGLLSQRDKEAPRLTESGFQFLLMETNAQLWYIIRE

Query:  YISNAEERGVDPADLISFLLELSFHVTGEAYDIDTLSDEQRYAIKDLADLGLVKLQQGRKESWFIPTKLATNL--------SMSLA--------------
        Y+  AE   +DP D+++F+  L     G+AY  D LS+ QR  ++D+ D GL+  Q     + F PT+LAT L        S S+A              
Subjt:  YISNAEERGVDPADLISFLLELSFHVTGEAYDIDTLSDEQRYAIKDLADLGLVKLQQGRKESWFIPTKLATNL--------SMSLA--------------

Query:  -------DSSSRKQ-GFVVVETNFRMYAYSSSKLHCEILRLFSRIEYQLPNLIVGAITKESLYNAFKNGITAEQIVTFLQQNAHPR--------------
               +++ R Q G +++ETNF++Y+YS+S L   IL LF  ++ +  N++ G +T+ES+ NA  NGITAEQI+ +L+ +AHPR              
Subjt:  -------DSSSRKQ-GFVVVETNFRMYAYSSSKLHCEILRLFSRIEYQLPNLIVGAITKESLYNAFKNGITAEQIVTFLQQNAHPR--------------

Query:  ----VAERIPSVPENVTDQIRLWESDLNRVDITPAHFYDEFPSREVFEAACDYAREWNGLLWEDSKNLRLVVKADIHTHMREHLRR
            V E +  +P  V DQIRLW+ +L+R+     + Y +F S + ++   DYA++   LLW++ K     V  + ++ + +  RR
Subjt:  ----VAERIPSVPENVTDQIRLWESDLNRVDITPAHFYDEFPSREVFEAACDYAREWNGLLWEDSKNLRLVVKADIHTHMREHLRR

Q92759 General transcription factor IIH subunit 46.9e-7034.22Show/hide
Query:  QVKIIAKNFMDMVASLPAMKLDQLYENAFICEAILRSLPPLAKKFVLQMLYIDAPVSAKSMEEWVLPDGVSKYKVAVDRLIQLRVFIETADRKRETTYRL
        +V +  +N  + +  L    LD+LY +   C A+ R LP LAK +V++ML+++ P+   ++  WV  +     + +   L  LR++             L
Subjt:  QVKIIAKNFMDMVASLPAMKLDQLYENAFICEAILRSLPPLAKKFVLQMLYIDAPVSAKSMEEWVLPDGVSKYKVAVDRLIQLRVFIETADRKRETTYRL

Query:  NPTFQANLQ-KLLIHGEVVAREPMPSNITVRLPSLEDLEAYALDQWECFLLQLINSGQAEKPSNISSSVMKVFQKGLL-SQRDKEAPRLTESGFQFLLME
        NP F+ NL+  LL  G+  + +            +  L+ YA ++WE  L  ++ S  A    +++  +    Q GL+ S    E P +T +GFQFLL++
Subjt:  NPTFQANLQ-KLLIHGEVVAREPMPSNITVRLPSLEDLEAYALDQWECFLLQLINSGQAEKPSNISSSVMKVFQKGLL-SQRDKEAPRLTESGFQFLLME

Query:  TNAQLWYIIREYISNAEERGVDPADLISFLLELSFHVTGEAYDIDTLSDEQRYAIKDLADLGLVKLQQGRKESWFIPTKLATNLS--MSLADSSSRKQGF
        T AQLWY + +Y+  A+ RG+D  +++SFL +LSF   G+ Y ++ +SD     ++ L + GLV  Q+ RK   + PT+LA NLS  +S A  +  + GF
Subjt:  TNAQLWYIIREYISNAEERGVDPADLISFLLELSFHVTGEAYDIDTLSDEQRYAIKDLADLGLVKLQQGRKESWFIPTKLATNLS--MSLADSSSRKQGF

Query:  VVVETNFRMYAYSSSKLHCEILRLFSRIEYQLPNLIVGAITKESLYNAFKNGITAEQIVTFLQQNAHPRVAERIPSVPENVTDQIRLWESDLNRVDITPA
        +VVETN+R+YAY+ S+L   ++ LFS + Y+ PN++V  +T+ES+  A  +GITA+QI+ FL+  AHP + ++ P +P  +TDQIRLWE + +R+  T  
Subjt:  VVVETNFRMYAYSSSKLHCEILRLFSRIEYQLPNLIVGAITKESLYNAFKNGITAEQIVTFLQQNAHPRVAERIPSVPENVTDQIRLWESDLNRVDITPA

Query:  HFYDEFPSREVFEAACDYAREWNGLLWEDSKNLRLVVKADIHTHMREHLRRQK
          Y++F S+  FE    +ARE   L++E+S    +VV    H+ ++   +RQK
Subjt:  HFYDEFPSREVFEAACDYAREWNGLLWEDSKNLRLVVKADIHTHMREHLRRQK

Arabidopsis top hitse value%identityAlignment
AT4G17020.1 transcription factor-related2.5e-20877.78Show/hide
Query:  MPQVKIIAKNFMDMVASLPAMKLDQLYENAFICEAILRSLPPLAKKFVLQMLYIDAPVSAKSMEEWVLPDGVSKYKVAVDRLIQLRVFIETADRKRETTY
        MPQVKIIAKNFMDMVASLPA+KLD+LY N FICEAILRSLPPLAKK+VLQMLYID PV A  MEEWVL DG SK++VA+DRLIQLR+F E +DRKR T+Y
Subjt:  MPQVKIIAKNFMDMVASLPAMKLDQLYENAFICEAILRSLPPLAKKFVLQMLYIDAPVSAKSMEEWVLPDGVSKYKVAVDRLIQLRVFIETADRKRETTY

Query:  RLNPTFQANLQKLLIHGEVVAREPMPSNITVRLPSLEDLEAYALDQWECFLLQLINSGQAEKPSNISSSVMKVFQKGLLSQRDKEAPRLTESGFQFLLME
         LNPTFQ NLQK +I G V+ REPM S+  ++LPSL++LE YAL QWECFLLQLINSGQ EK + ISSS+MK+FQ+GLLSQRDK+ PRLTESGFQFLLM+
Subjt:  RLNPTFQANLQKLLIHGEVVAREPMPSNITVRLPSLEDLEAYALDQWECFLLQLINSGQAEKPSNISSSVMKVFQKGLLSQRDKEAPRLTESGFQFLLME

Query:  TNAQLWYIIREYISNAEERGVDPADLISFLLELSFHVTGEAYDIDTLSDEQRYAIKDLADLGLVKLQQGRKESWFIPTKLATNLSMSLADSSSRKQGFVV
        TNAQLWYIIREYI NAEER VDPADLISFLLELSFHVTG+AY+++TL++ Q   +KDLADLGLVKLQQGRK+SWFIPTKLATNLS+SLADSS+RK+GFVV
Subjt:  TNAQLWYIIREYISNAEERGVDPADLISFLLELSFHVTGEAYDIDTLSDEQRYAIKDLADLGLVKLQQGRKESWFIPTKLATNLSMSLADSSSRKQGFVV

Query:  VETNFRMYAYSSSKLHCEILRLFSRIEYQLPNLIVGAITKESLYNAFKNGITAEQIVTFLQQNAHPRVAERIPSVPENVTDQIRLWESDLNRVDITPAHF
        +ETNFRMYAYS+SKL CEILRLF+RIEYQLPNLI  AITKESLYNAF NGIT++QI+TFLQQN+HPR A+R+PS+PENVTDQIRLWE+DL R+++T AHF
Subjt:  VETNFRMYAYSSSKLHCEILRLFSRIEYQLPNLIVGAITKESLYNAFKNGITAEQIVTFLQQNAHPRVAERIPSVPENVTDQIRLWESDLNRVDITPAHF

Query:  YDEFPSREVFEAACDYAREWNGLLWEDSKNLRLVVKADIHTHMREHLRRQ
        YDEFPS++VFEAACD+AREW GLLWEDSK +RLVVK+++H  MRE L  Q
Subjt:  YDEFPSREVFEAACDYAREWNGLLWEDSKNLRLVVKADIHTHMREHLRRQ

AT4G17020.2 transcription factor-related2.5e-20877.78Show/hide
Query:  MPQVKIIAKNFMDMVASLPAMKLDQLYENAFICEAILRSLPPLAKKFVLQMLYIDAPVSAKSMEEWVLPDGVSKYKVAVDRLIQLRVFIETADRKRETTY
        MPQVKIIAKNFMDMVASLPA+KLD+LY N FICEAILRSLPPLAKK+VLQMLYID PV A  MEEWVL DG SK++VA+DRLIQLR+F E +DRKR T+Y
Subjt:  MPQVKIIAKNFMDMVASLPAMKLDQLYENAFICEAILRSLPPLAKKFVLQMLYIDAPVSAKSMEEWVLPDGVSKYKVAVDRLIQLRVFIETADRKRETTY

Query:  RLNPTFQANLQKLLIHGEVVAREPMPSNITVRLPSLEDLEAYALDQWECFLLQLINSGQAEKPSNISSSVMKVFQKGLLSQRDKEAPRLTESGFQFLLME
         LNPTFQ NLQK +I G V+ REPM S+  ++LPSL++LE YAL QWECFLLQLINSGQ EK + ISSS+MK+FQ+GLLSQRDK+ PRLTESGFQFLLM+
Subjt:  RLNPTFQANLQKLLIHGEVVAREPMPSNITVRLPSLEDLEAYALDQWECFLLQLINSGQAEKPSNISSSVMKVFQKGLLSQRDKEAPRLTESGFQFLLME

Query:  TNAQLWYIIREYISNAEERGVDPADLISFLLELSFHVTGEAYDIDTLSDEQRYAIKDLADLGLVKLQQGRKESWFIPTKLATNLSMSLADSSSRKQGFVV
        TNAQLWYIIREYI NAEER VDPADLISFLLELSFHVTG+AY+++TL++ Q   +KDLADLGLVKLQQGRK+SWFIPTKLATNLS+SLADSS+RK+GFVV
Subjt:  TNAQLWYIIREYISNAEERGVDPADLISFLLELSFHVTGEAYDIDTLSDEQRYAIKDLADLGLVKLQQGRKESWFIPTKLATNLSMSLADSSSRKQGFVV

Query:  VETNFRMYAYSSSKLHCEILRLFSRIEYQLPNLIVGAITKESLYNAFKNGITAEQIVTFLQQNAHPRVAERIPSVPENVTDQIRLWESDLNRVDITPAHF
        +ETNFRMYAYS+SKL CEILRLF+RIEYQLPNLI  AITKESLYNAF NGIT++QI+TFLQQN+HPR A+R+PS+PENVTDQIRLWE+DL R+++T AHF
Subjt:  VETNFRMYAYSSSKLHCEILRLFSRIEYQLPNLIVGAITKESLYNAFKNGITAEQIVTFLQQNAHPRVAERIPSVPENVTDQIRLWESDLNRVDITPAHF

Query:  YDEFPSREVFEAACDYAREWNGLLWEDSKNLRLVVKADIHTHMREHLRRQ
        YDEFPS++VFEAACD+AREW GLLWEDSK +RLVVK+++H  MRE L  Q
Subjt:  YDEFPSREVFEAACDYAREWNGLLWEDSKNLRLVVKADIHTHMREHLRRQ

AT4G17020.3 transcription factor-related2.5e-20877.78Show/hide
Query:  MPQVKIIAKNFMDMVASLPAMKLDQLYENAFICEAILRSLPPLAKKFVLQMLYIDAPVSAKSMEEWVLPDGVSKYKVAVDRLIQLRVFIETADRKRETTY
        MPQVKIIAKNFMDMVASLPA+KLD+LY N FICEAILRSLPPLAKK+VLQMLYID PV A  MEEWVL DG SK++VA+DRLIQLR+F E +DRKR T+Y
Subjt:  MPQVKIIAKNFMDMVASLPAMKLDQLYENAFICEAILRSLPPLAKKFVLQMLYIDAPVSAKSMEEWVLPDGVSKYKVAVDRLIQLRVFIETADRKRETTY

Query:  RLNPTFQANLQKLLIHGEVVAREPMPSNITVRLPSLEDLEAYALDQWECFLLQLINSGQAEKPSNISSSVMKVFQKGLLSQRDKEAPRLTESGFQFLLME
         LNPTFQ NLQK +I G V+ REPM S+  ++LPSL++LE YAL QWECFLLQLINSGQ EK + ISSS+MK+FQ+GLLSQRDK+ PRLTESGFQFLLM+
Subjt:  RLNPTFQANLQKLLIHGEVVAREPMPSNITVRLPSLEDLEAYALDQWECFLLQLINSGQAEKPSNISSSVMKVFQKGLLSQRDKEAPRLTESGFQFLLME

Query:  TNAQLWYIIREYISNAEERGVDPADLISFLLELSFHVTGEAYDIDTLSDEQRYAIKDLADLGLVKLQQGRKESWFIPTKLATNLSMSLADSSSRKQGFVV
        TNAQLWYIIREYI NAEER VDPADLISFLLELSFHVTG+AY+++TL++ Q   +KDLADLGLVKLQQGRK+SWFIPTKLATNLS+SLADSS+RK+GFVV
Subjt:  TNAQLWYIIREYISNAEERGVDPADLISFLLELSFHVTGEAYDIDTLSDEQRYAIKDLADLGLVKLQQGRKESWFIPTKLATNLSMSLADSSSRKQGFVV

Query:  VETNFRMYAYSSSKLHCEILRLFSRIEYQLPNLIVGAITKESLYNAFKNGITAEQIVTFLQQNAHPRVAERIPSVPENVTDQIRLWESDLNRVDITPAHF
        +ETNFRMYAYS+SKL CEILRLF+RIEYQLPNLI  AITKESLYNAF NGIT++QI+TFLQQN+HPR A+R+PS+PENVTDQIRLWE+DL R+++T AHF
Subjt:  VETNFRMYAYSSSKLHCEILRLFSRIEYQLPNLIVGAITKESLYNAFKNGITAEQIVTFLQQNAHPRVAERIPSVPENVTDQIRLWESDLNRVDITPAHF

Query:  YDEFPSREVFEAACDYAREWNGLLWEDSKNLRLVVKADIHTHMREHLRRQ
        YDEFPS++VFEAACD+AREW GLLWEDSK +RLVVK+++H  MRE L  Q
Subjt:  YDEFPSREVFEAACDYAREWNGLLWEDSKNLRLVVKADIHTHMREHLRRQ


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCCTCAAGTAAAGATCATAGCGAAGAATTTTATGGACATGGTGGCCTCCTTGCCCGCCATGAAGCTCGATCAACTCTATGAGAATGCATTCATCTGCGAAGCCATTCT
CAGGTCACTTCCGCCACTGGCTAAGAAGTTTGTTTTACAAATGTTATACATTGATGCTCCAGTTTCAGCCAAGTCCATGGAGGAGTGGGTGCTCCCAGATGGAGTCTCAA
AGTATAAGGTTGCTGTTGATCGATTGATTCAATTGAGAGTATTCATTGAGACTGCAGATAGGAAAAGAGAAACAACCTACCGGCTAAATCCAACTTTCCAAGCAAACCTC
CAAAAGCTTTTAATACATGGTGAAGTTGTAGCCAGAGAACCGATGCCTTCTAATATAACCGTGAGGCTTCCAAGTTTGGAAGATCTTGAGGCTTATGCTCTGGATCAGTG
GGAGTGCTTCTTGCTGCAATTGATAAACTCGGGCCAAGCAGAGAAGCCATCAAATATTAGTTCTTCTGTGATGAAAGTTTTCCAGAAAGGCCTTTTAAGTCAGAGGGATA
AAGAAGCTCCACGATTAACTGAGAGTGGTTTCCAGTTCTTGTTGATGGAAACAAATGCACAACTTTGGTATATCATCCGAGAATATATATCTAACGCTGAGGAGCGAGGT
GTGGATCCTGCAGATTTGATTTCTTTTCTGCTAGAGCTTAGTTTTCACGTCACAGGAGAGGCTTATGATATTGATACACTGTCAGATGAACAGAGGTATGCTATCAAGGA
CCTTGCTGATCTGGGACTAGTTAAGCTTCAGCAGGGTAGAAAAGAGAGTTGGTTCATACCTACTAAATTAGCCACAAATCTTTCAATGAGTTTGGCAGATTCCTCTTCAA
GGAAACAAGGATTTGTTGTTGTGGAGACAAATTTCAGGATGTATGCTTATTCTTCTTCCAAACTACATTGTGAAATATTACGTCTTTTTTCAAGGATTGAGTATCAACTT
CCAAATCTTATAGTTGGAGCAATAACGAAAGAAAGCTTGTATAATGCTTTTAAGAATGGGATTACAGCTGAGCAGATAGTTACTTTTCTACAACAGAATGCACATCCTCG
TGTTGCAGAGAGAATACCATCAGTACCTGAAAATGTCACAGATCAGATTAGGTTATGGGAATCAGATCTTAATAGGGTTGATATTACTCCCGCACATTTTTACGATGAAT
TTCCTTCCAGGGAAGTTTTCGAGGCTGCTTGCGATTATGCACGAGAGTGGAATGGGTTGCTATGGGAGGATTCAAAAAACTTGCGACTGGTAGTGAAGGCAGACATACAC
ACACATATGCGAGAACATCTTCGGCGTCAAAAGTAG
mRNA sequenceShow/hide mRNA sequence
GTCGAGTTTCAAGTTGCATATCTGTCCAAGTCGCCGCTGCCGTCCGATCACCTTTCAGCGGGTGTTGACGCGCGAGGTTCCAAATTTTATACTTAGGGTTTCCATTTTTA
CAAAGGGGCAATTGGACAATTCATATATCCATTTGTCTAAAAAAAAAAAAGAAGTTTAAATTGAAAGCTCATCTAACATGGCAATTTCCCGACCCAATAGCTTTTTTTAT
AATCAAGAAGAATTGGACATTCAACTACGTGTCATTCTTCGTCTGCGGTCTTCCGAATGAGCAAGCAGAGTGTCAATCTACTAAGGTTAACTTTGAATTAGTTGATAATT
GATTGATTTCAGAGGATCCCAAGACTTCACCATTTGCTATAAATCTCACTCTCGACCTGGAAGCTGCAATTTTTTTTTTTTAATTCGTGATTCTGTGCCTAAAGGACTAG
CAAAGCTAATCCAAAATGCCTCAAGTAAAGATCATAGCGAAGAATTTTATGGACATGGTGGCCTCCTTGCCCGCCATGAAGCTCGATCAACTCTATGAGAATGCATTCAT
CTGCGAAGCCATTCTCAGGTCACTTCCGCCACTGGCTAAGAAGTTTGTTTTACAAATGTTATACATTGATGCTCCAGTTTCAGCCAAGTCCATGGAGGAGTGGGTGCTCC
CAGATGGAGTCTCAAAGTATAAGGTTGCTGTTGATCGATTGATTCAATTGAGAGTATTCATTGAGACTGCAGATAGGAAAAGAGAAACAACCTACCGGCTAAATCCAACT
TTCCAAGCAAACCTCCAAAAGCTTTTAATACATGGTGAAGTTGTAGCCAGAGAACCGATGCCTTCTAATATAACCGTGAGGCTTCCAAGTTTGGAAGATCTTGAGGCTTA
TGCTCTGGATCAGTGGGAGTGCTTCTTGCTGCAATTGATAAACTCGGGCCAAGCAGAGAAGCCATCAAATATTAGTTCTTCTGTGATGAAAGTTTTCCAGAAAGGCCTTT
TAAGTCAGAGGGATAAAGAAGCTCCACGATTAACTGAGAGTGGTTTCCAGTTCTTGTTGATGGAAACAAATGCACAACTTTGGTATATCATCCGAGAATATATATCTAAC
GCTGAGGAGCGAGGTGTGGATCCTGCAGATTTGATTTCTTTTCTGCTAGAGCTTAGTTTTCACGTCACAGGAGAGGCTTATGATATTGATACACTGTCAGATGAACAGAG
GTATGCTATCAAGGACCTTGCTGATCTGGGACTAGTTAAGCTTCAGCAGGGTAGAAAAGAGAGTTGGTTCATACCTACTAAATTAGCCACAAATCTTTCAATGAGTTTGG
CAGATTCCTCTTCAAGGAAACAAGGATTTGTTGTTGTGGAGACAAATTTCAGGATGTATGCTTATTCTTCTTCCAAACTACATTGTGAAATATTACGTCTTTTTTCAAGG
ATTGAGTATCAACTTCCAAATCTTATAGTTGGAGCAATAACGAAAGAAAGCTTGTATAATGCTTTTAAGAATGGGATTACAGCTGAGCAGATAGTTACTTTTCTACAACA
GAATGCACATCCTCGTGTTGCAGAGAGAATACCATCAGTACCTGAAAATGTCACAGATCAGATTAGGTTATGGGAATCAGATCTTAATAGGGTTGATATTACTCCCGCAC
ATTTTTACGATGAATTTCCTTCCAGGGAAGTTTTCGAGGCTGCTTGCGATTATGCACGAGAGTGGAATGGGTTGCTATGGGAGGATTCAAAAAACTTGCGACTGGTAGTG
AAGGCAGACATACACACACATATGCGAGAACATCTTCGGCGTCAAAAGTAGATTGCGAAGAGATGATACAACACCGCTGCCAAGAAATGTTTATAACCACTCTGGCACTT
CCGTTTTTGTTGCTTAGTGGCATGACCTAAAAGATTTACTTCGTTAAGGACGGTGAAGAGAACGGATTGAAAGTTTTTGGTGGGATTGGGAGGAAGGAATATTGTGCCGA
TGACAATGGTTTTTGTTACTATGTACATTTTTGAAGTCGGTTCCCCTTCGTGGACTATATGATACGCAAGTTTTGTTAGGTTGATTTCCCTCTGACAATCAACTTTTGGG
TATAGTTGGATACAAATGTGTTACTAATCAAGAGATTTGTGGTCAAAATTCTTTAATCTTATTGTATCACTACTTGGATTAAAAAATAAAAAGAAGAAAAGAAATTATGG
A
Protein sequenceShow/hide protein sequence
MPQVKIIAKNFMDMVASLPAMKLDQLYENAFICEAILRSLPPLAKKFVLQMLYIDAPVSAKSMEEWVLPDGVSKYKVAVDRLIQLRVFIETADRKRETTYRLNPTFQANL
QKLLIHGEVVAREPMPSNITVRLPSLEDLEAYALDQWECFLLQLINSGQAEKPSNISSSVMKVFQKGLLSQRDKEAPRLTESGFQFLLMETNAQLWYIIREYISNAEERG
VDPADLISFLLELSFHVTGEAYDIDTLSDEQRYAIKDLADLGLVKLQQGRKESWFIPTKLATNLSMSLADSSSRKQGFVVVETNFRMYAYSSSKLHCEILRLFSRIEYQL
PNLIVGAITKESLYNAFKNGITAEQIVTFLQQNAHPRVAERIPSVPENVTDQIRLWESDLNRVDITPAHFYDEFPSREVFEAACDYAREWNGLLWEDSKNLRLVVKADIH
THMREHLRRQK