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IVF0002332 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0002332
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionRNase H domain-containing protein
Genome locationchr10:20748741..20748947
RNA-Seq ExpressionIVF0002332
SyntenyIVF0002332
Gene Ontology termsGO:0090502 - RNA phosphodiester bond hydrolysis, endonucleolytic (biological process)
GO:0003676 - nucleic acid binding (molecular function)
GO:0004523 - RNA-DNA hybrid ribonuclease activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0050355.1 protein Ycf2-like [Cucumis melo var. makuwa]1.37e-2078.12Show/hide
Query:  DDRRCKRTGDGCVRRVKKLKRRMRRTAWRWLREGSRGHADGGGDMNGGERMETAASDDVGRRRR
        D +RCKR  DG VRRVKK KRR RRTAWRWLREGSRG ADGGGD NGGERMETAA   VGR R+
Subjt:  DDRRCKRTGDGCVRRVKKLKRRMRRTAWRWLREGSRGHADGGGDMNGGERMETAASDDVGRRRR
KAA0056205.1 uncharacterized protein E6C27_scaffold431G00330 [Cucumis melo var. makuwa]1.41e-1978.12Show/hide
Query:  DDRRCKRTGDGCVRRVKKLKRRMRRTAWRWLREGSRGHADGGGDMNGGERMETAASDDVGRRRR
        D RR KR  DGCVRRVKKLKRR RRTAWRWLREG RG ADGGGD N GERMETAA   VGR R+
Subjt:  DDRRCKRTGDGCVRRVKKLKRRMRRTAWRWLREGSRGHADGGGDMNGGERMETAASDDVGRRRR
TrEMBL top hitse value%identityAlignment
A0A5A7U9S5 Protein Ycf2-like5.9e-1678.12Show/hide
Query:  DDRRCKRTGDGCVRRVKKLKRRMRRTAWRWLREGSRGHADGGGDMNGGERMETAASDDVGRRRR
        D +RCKR  DG VRRVKK KRR RRTAWRWLREGSRG ADGGGD NGGERMETAA   VGR R+
Subjt:  DDRRCKRTGDGCVRRVKKLKRRMRRTAWRWLREGSRGHADGGGDMNGGERMETAASDDVGRRRR
A0A5A7URF1 RNase H domain-containing protein2.9e-1578.12Show/hide
Query:  DDRRCKRTGDGCVRRVKKLKRRMRRTAWRWLREGSRGHADGGGDMNGGERMETAASDDVGRRRR
        D RR KR  DGCVRRVKKLKRR RRTAWRWLREG RG ADGGGD N GERMETAA   VGR R+
Subjt:  DDRRCKRTGDGCVRRVKKLKRRMRRTAWRWLREGSRGHADGGGDMNGGERMETAASDDVGRRRR
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGACGACAGACGGTGCAAACGCACGGGTGATGGCTGCGTTCGTCGGGTGAAGAAGCTGAAGAGAAGAATGAGAAGAACGGCGTGGCGTTGGCTTCGTGAAGGCAGTCG
AGGACACGCGGACGGAGGTGGAGACATGAATGGAGGAGAAAGGATGGAGACGGCGGCGTCGGACGATGTAGGAAGAAGAAGAAGATGGAACGACTAG
mRNA sequenceShow/hide mRNA sequence
ATGGACGACAGACGGTGCAAACGCACGGGTGATGGCTGCGTTCGTCGGGTGAAGAAGCTGAAGAGAAGAATGAGAAGAACGGCGTGGCGTTGGCTTCGTGAAGGCAGTCG
AGGACACGCGGACGGAGGTGGAGACATGAATGGAGGAGAAAGGATGGAGACGGCGGCGTCGGACGATGTAGGAAGAAGAAGAAGATGGAACGACTAG
Protein sequenceShow/hide protein sequence
MDDRRCKRTGDGCVRRVKKLKRRMRRTAWRWLREGSRGHADGGGDMNGGERMETAASDDVGRRRRWND