CuGenDBv2

Gene ID	IVF0002344
Organism	Cucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Description	nucleotide-sugar uncharacterized transporter 3
Genome location	chr04:7719580..7719840
RNA-Seq Expression	IVF0002344
Synteny	IVF0002344
Gene Ontology terms	GO:0000398 - mRNA splicing, via spliceosome (biological process) GO:0006355 - regulation of transcription, DNA-templated (biological process) GO:0008643 - carbohydrate transport (biological process) GO:0015787 - UDP-glucuronic acid transmembrane transport (biological process) GO:0015789 - UDP-N-acetylgalactosamine transmembrane transport (biological process) GO:1990569 - UDP-N-acetylglucosamine transmembrane transport (biological process) GO:0005689 - U12-type spliceosomal complex (cellular component) GO:0005794 - Golgi apparatus (cellular component) GO:0016021 - integral component of membrane (cellular component) GO:0003700 - DNA-binding transcription factor activity (molecular function) GO:0005461 - UDP-glucuronic acid transmembrane transporter activity (molecular function) GO:0005462 - UDP-N-acetylglucosamine transmembrane transporter activity (molecular function) GO:0005463 - UDP-N-acetylgalactosamine transmembrane transporter activity (molecular function) GO:0015297 - antiporter activity (molecular function) GO:0043565 - sequence-specific DNA binding (molecular function)
InterPro domains	NA

Homology

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GenBank top hits

e value

%identity

Alignment

KAA0036839.1 putative UDP-sugar transporter [Cucumis melo var. makuwa]

8.54e-46

100

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Query:  MLHIIVFFSQIPIPNPFLLFTAKASSKISLKPLNSEKNLMLLLSDPPRDTKEKDRLIRVDEKLSRGSSMTKRGAYVALSYTACS
        MLHIIVFFSQIPIPNPFLLFTAKASSKISLKPLNSEKNLMLLLSDPPRDTKEKDRLIRVDEKLSRGSSMTKRGAYVALSYTACS
Subjt:  MLHIIVFFSQIPIPNPFLLFTAKASSKISLKPLNSEKNLMLLLSDPPRDTKEKDRLIRVDEKLSRGSSMTKRGAYVALSYTACS

KAA0065956.1 putative UDP-sugar transporter [Cucumis melo var. makuwa]

4.06e-23

73.85

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Query:  TAKASSKISLKPLNSEKNLMLLLSDPPRDTKEKDRLIRVDEKLSRGSSMTKRGAYVALSYTACSC
        ++ ASSKISLKPLN EKNLML +SDPP  ++EKDRL R D+KL RGSSMTKRG+Y ALSY ACSC
Subjt:  TAKASSKISLKPLNSEKNLMLLLSDPPRDTKEKDRLIRVDEKLSRGSSMTKRGAYVALSYTACSC

TYJ95906.1 putative UDP-sugar transporter [Cucumis melo var. makuwa]

4.37e-46

100

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Query:  MLHIIVFFSQIPIPNPFLLFTAKASSKISLKPLNSEKNLMLLLSDPPRDTKEKDRLIRVDEKLSRGSSMTKRGAYVALSYTACS
        MLHIIVFFSQIPIPNPFLLFTAKASSKISLKPLNSEKNLMLLLSDPPRDTKEKDRLIRVDEKLSRGSSMTKRGAYVALSYTACS
Subjt:  MLHIIVFFSQIPIPNPFLLFTAKASSKISLKPLNSEKNLMLLLSDPPRDTKEKDRLIRVDEKLSRGSSMTKRGAYVALSYTACS

TYK31438.1 putative UDP-sugar transporter [Cucumis melo var. makuwa]

1.75e-20

79.03

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Query:  AKASSKISLKPLNSEKNLMLLLSDPPRDTKEKDRLIRVDEKLSRGSSMTKRGAYVALSYTAC
        AKA SK+SLKP NSEKNLML +SDPP  T++KDRLIR DEKL RGSSMTKRGAY ALSY AC
Subjt:  AKASSKISLKPLNSEKNLMLLLSDPPRDTKEKDRLIRVDEKLSRGSSMTKRGAYVALSYTAC

XP_008466419.1 PREDICTED: putative UDP-sugar transporter DDB_G0278631 [Cucumis melo]

1.16e-17

78.57

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Query:  ISLKPLNSEKNLMLLLSDPPRDTKEKDRLIRVDEKLSRGSSMTKRGAYVALSYTAC
        +SLKP NSEKNLML +SDPP  T++KDRLIR DEKL RGSSMTKRGAY ALSY AC
Subjt:  ISLKPLNSEKNLMLLLSDPPRDTKEKDRLIRVDEKLSRGSSMTKRGAYVALSYTAC

TrEMBL top hits

e value

%identity

Alignment

A0A5A7T635 Putative UDP-sugar transporter

3.8e-36

100

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Query:  MLHIIVFFSQIPIPNPFLLFTAKASSKISLKPLNSEKNLMLLLSDPPRDTKEKDRLIRVDEKLSRGSSMTKRGAYVALSYTACS
        MLHIIVFFSQIPIPNPFLLFTAKASSKISLKPLNSEKNLMLLLSDPPRDTKEKDRLIRVDEKLSRGSSMTKRGAYVALSYTACS
Subjt:  MLHIIVFFSQIPIPNPFLLFTAKASSKISLKPLNSEKNLMLLLSDPPRDTKEKDRLIRVDEKLSRGSSMTKRGAYVALSYTACS

A0A5A7TBQ5 Putative UDP-sugar transporter

1.5e-13

77.19

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Query:  ISLKPLNSEKNLMLLLSDPPRDTKEKDRLIRVDEKLSRGSSMTKRGAYVALSYTACS
        +SLKP NSEKNLML +SDPP  T++KDRLIR DEKL RGSSMTKRGAY ALSY AC+
Subjt:  ISLKPLNSEKNLMLLLSDPPRDTKEKDRLIRVDEKLSRGSSMTKRGAYVALSYTACS

A0A5D3BAI3 Putative UDP-sugar transporter

3.8e-36

100

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Query:  MLHIIVFFSQIPIPNPFLLFTAKASSKISLKPLNSEKNLMLLLSDPPRDTKEKDRLIRVDEKLSRGSSMTKRGAYVALSYTACS
        MLHIIVFFSQIPIPNPFLLFTAKASSKISLKPLNSEKNLMLLLSDPPRDTKEKDRLIRVDEKLSRGSSMTKRGAYVALSYTACS
Subjt:  MLHIIVFFSQIPIPNPFLLFTAKASSKISLKPLNSEKNLMLLLSDPPRDTKEKDRLIRVDEKLSRGSSMTKRGAYVALSYTACS

A0A5D3E2E6 Putative UDP-sugar transporter

4.3e-16

73.85

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Query:  TAKASSKISLKPLNSEKNLMLLLSDPPRDTKEKDRLIRVDEKLSRGSSMTKRGAYVALSYTACSC
        ++ ASSKISLKPLN EKNLML +SDPP  ++EKDRL R D+KL RGSSMTKRG+Y ALSY ACSC
Subjt:  TAKASSKISLKPLNSEKNLMLLLSDPPRDTKEKDRLIRVDEKLSRGSSMTKRGAYVALSYTACSC

A0A5D3E6J4 Putative UDP-sugar transporter

4.3e-16

77.78

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Query:  AKASSKISLKPLNSEKNLMLLLSDPPRDTKEKDRLIRVDEKLSRGSSMTKRGAYVALSYTACS
        AKA SK+SLKP NSEKNLML +SDPP  T++KDRLIR DEKL RGSSMTKRGAY ALSY AC+
Subjt:  AKASSKISLKPLNSEKNLMLLLSDPPRDTKEKDRLIRVDEKLSRGSSMTKRGAYVALSYTACS

SwissProt top hits

e value

%identity

Alignment

A8MRY9 UDP-N-acetylglucosamine transporter UGNT1

6.3e-04

51.06

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Query:  NLMLLLSDPPRDTKEKDRLIRVDEKLSRGSSMTKRGAYVALSYTACS
        N +L +SDPP   +       VD++L +GS+MTKRGAY ALSY AC+
Subjt:  NLMLLLSDPPRDTKEKDRLIRVDEKLSRGSSMTKRGAYVALSYTACS

Arabidopsis top hits

e value

%identity

Alignment

AT4G32272.1 Nucleotide/sugar transporter family protein

4.5e-05

51.06

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Query:  NLMLLLSDPPRDTKEKDRLIRVDEKLSRGSSMTKRGAYVALSYTACS
        N +L +SDPP   +       VD++L +GS+MTKRGAY ALSY AC+
Subjt:  NLMLLLSDPPRDTKEKDRLIRVDEKLSRGSSMTKRGAYVALSYTACS

AT4G32272.2 Nucleotide/sugar transporter family protein

4.5e-05

51.06

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Query:  NLMLLLSDPPRDTKEKDRLIRVDEKLSRGSSMTKRGAYVALSYTACS
        N +L +SDPP   +       VD++L +GS+MTKRGAY ALSY AC+
Subjt:  NLMLLLSDPPRDTKEKDRLIRVDEKLSRGSSMTKRGAYVALSYTACS

Sequences

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CDS sequence

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ATGCTCCACATCATCGTGTTCTTCTCCCAAATCCCAATTCCAAATCCATTTCTACTCTTCACAGCCAAGGCAAGCTCAAAGATATCATTGAAGCCATTGAATTCAGAGAA
GAATTTGATGTTGCTGTTGTCGGATCCTCCTCGCGACACTAAAGAGAAAGACCGATTGATCAGAGTCGATGAGAAGCTCTCTAGAGGATCCTCCATGACCAAACGAGGAG
CCTATGTTGCTCTCTCTTACACGGCTTGCAGTTGTGTGTAA

mRNA sequence

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Protein sequence

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MLHIIVFFSQIPIPNPFLLFTAKASSKISLKPLNSEKNLMLLLSDPPRDTKEKDRLIRVDEKLSRGSSMTKRGAYVALSYTACSCV

IVF0002344 (gene) of Melon (IVF77) v1 genome