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IVF0002351 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0002351
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionSAGA-associated factor 11
Genome locationchr12:691588..694637
RNA-Seq ExpressionIVF0002351
SyntenyIVF0002351
Gene Ontology termsGO:0006325 - chromatin organization (biological process)
GO:0016310 - phosphorylation (biological process)
GO:0035616 - histone H2B conserved C-terminal lysine deubiquitination (biological process)
GO:0016021 - integral component of membrane (cellular component)
GO:0031969 - chloroplast membrane (cellular component)
GO:0070461 - SAGA-type complex (cellular component)
GO:0071819 - DUBm complex (cellular component)
GO:0016301 - kinase activity (molecular function)
GO:0046872 - metal ion binding (molecular function)
InterPro domainsIPR013246 - SAGA complex, Sgf11 subunit


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0060025.1 farnesol kinase [Cucumis melo var. makuwa]9.63e-9398.67Show/hide
Query:  MSMPNEDNASSQTQLSSNLFGDLLDSVIVDVASECHRIARLGLDRNLEEEEEELRLSAQARVRVADSSNSSEANGKYVVDIFGQTHPSVANEIFDCMNCG
        MSMPNEDNASSQTQLSSNLFGDLLDSVIVDVASECHRIARLGLDRNLEEEEEELRLSAQARVRVADSSNSSEANGKYVVDIFGQTHPSVANEIFDCMNCG
Subjt:  MSMPNEDNASSQTQLSSNLFGDLLDSVIVDVASECHRIARLGLDRNLEEEEEELRLSAQARVRVADSSNSSEANGKYVVDIFGQTHPSVANEIFDCMNCG

Query:  RSIMAGRFAPHLEKCMGRGRKARPKVTRSSTAAQSRYSRGNPVSAYSLTP
        RSIMAGRFAPHLEKCMGRGRKARPKVTRSSTAAQSRYSRGNPVSAYS  P
Subjt:  RSIMAGRFAPHLEKCMGRGRKARPKVTRSSTAAQSRYSRGNPVSAYSLTP

XP_004153719.1 SAGA-associated factor 11 [Cucumis sativus]1.23e-9698Show/hide
Query:  MSMPNEDNASSQTQLSSNLFGDLLDSVIVDVASECHRIARLGLDRNLEEEEEELRLSAQARVRVADSSNSSEANGKYVVDIFGQTHPSVANEIFDCMNCG
        MSMPNEDNASSQTQLSSNLFGDLLDSVIVD+ASECHRIARLGLDRNLEEEEEELRLSAQARVRVADSSNSSEANGKYVVDIFGQTHPSVANEIFDCMNCG
Subjt:  MSMPNEDNASSQTQLSSNLFGDLLDSVIVDVASECHRIARLGLDRNLEEEEEELRLSAQARVRVADSSNSSEANGKYVVDIFGQTHPSVANEIFDCMNCG

Query:  RSIMAGRFAPHLEKCMGRGRKARPKVTRSSTAAQSRYSRGNPVSAYSLTP
        RSIMAGRFAPHLEKCMGRGRKARPKVTRSSTAAQSRYSRGNPVSAYS  P
Subjt:  RSIMAGRFAPHLEKCMGRGRKARPKVTRSSTAAQSRYSRGNPVSAYSLTP

XP_008457340.1 PREDICTED: ataxin-7-like protein 3 [Cucumis melo]8.63e-9798.67Show/hide
Query:  MSMPNEDNASSQTQLSSNLFGDLLDSVIVDVASECHRIARLGLDRNLEEEEEELRLSAQARVRVADSSNSSEANGKYVVDIFGQTHPSVANEIFDCMNCG
        MSMPNEDNASSQTQLSSNLFGDLLDSVIVDVASECHRIARLGLDRNLEEEEEELRLSAQARVRVADSSNSSEANGKYVVDIFGQTHPSVANEIFDCMNCG
Subjt:  MSMPNEDNASSQTQLSSNLFGDLLDSVIVDVASECHRIARLGLDRNLEEEEEELRLSAQARVRVADSSNSSEANGKYVVDIFGQTHPSVANEIFDCMNCG

Query:  RSIMAGRFAPHLEKCMGRGRKARPKVTRSSTAAQSRYSRGNPVSAYSLTP
        RSIMAGRFAPHLEKCMGRGRKARPKVTRSSTAAQSRYSRGNPVSAYS  P
Subjt:  RSIMAGRFAPHLEKCMGRGRKARPKVTRSSTAAQSRYSRGNPVSAYSLTP

XP_022150963.1 ataxin-7-like protein 3 [Momordica charantia]6.18e-9093.88Show/hide
Query:  MSMPNEDNASSQTQLSSNLFGDLLDSVIVDVASECHRIARLGLDRNLEEEEEELRLSAQARVRVADSSNSSEANGKYVVDIFGQTHPSVANEIFDCMNCG
        MSMPNE++ASS TQLSSN FGDLLDSVIVDVASECHRIARLGLDRNLEEEEEELRLSAQARVRVADSSNSSEANGKY+VDIFGQTHPSVANEIFDCMNCG
Subjt:  MSMPNEDNASSQTQLSSNLFGDLLDSVIVDVASECHRIARLGLDRNLEEEEEELRLSAQARVRVADSSNSSEANGKYVVDIFGQTHPSVANEIFDCMNCG

Query:  RSIMAGRFAPHLEKCMGRGRKARPKVTRSSTAAQSRYSRGNPVSAYS
        RSIMAGRFAPHLEKCMGRGRKAR KVTRSSTAAQ RYSRG+PV AYS
Subjt:  RSIMAGRFAPHLEKCMGRGRKARPKVTRSSTAAQSRYSRGNPVSAYS

XP_038893583.1 SAGA-associated factor 11 [Benincasa hispida]2.47e-9699.32Show/hide
Query:  MSMPNEDNASSQTQLSSNLFGDLLDSVIVDVASECHRIARLGLDRNLEEEEEELRLSAQARVRVADSSNSSEANGKYVVDIFGQTHPSVANEIFDCMNCG
        MSMPNEDNASSQTQLSSNLFGDLLDSVIVD+ASECHRIARLGLDRNLEEEEEELRLSAQARVRVADSSNSSEANGKYVVDIFGQTHPSVANEIFDCMNCG
Subjt:  MSMPNEDNASSQTQLSSNLFGDLLDSVIVDVASECHRIARLGLDRNLEEEEEELRLSAQARVRVADSSNSSEANGKYVVDIFGQTHPSVANEIFDCMNCG

Query:  RSIMAGRFAPHLEKCMGRGRKARPKVTRSSTAAQSRYSRGNPVSAYS
        RSIMAGRFAPHLEKCMGRGRKARPKVTRSSTAAQSRYSRGNPVSAYS
Subjt:  RSIMAGRFAPHLEKCMGRGRKARPKVTRSSTAAQSRYSRGNPVSAYS

TrEMBL top hitse value%identityAlignment
A0A0A0LYA8 SAGA-associated factor 115.6e-7498Show/hide
Query:  MSMPNEDNASSQTQLSSNLFGDLLDSVIVDVASECHRIARLGLDRNLEEEEEELRLSAQARVRVADSSNSSEANGKYVVDIFGQTHPSVANEIFDCMNCG
        MSMPNEDNASSQTQLSSNLFGDLLDSVIVD+ASECHRIARLGLDRNLEEEEEELRLSAQARVRVADSSNSSEANGKYVVDIFGQTHPSVANEIFDCMNCG
Subjt:  MSMPNEDNASSQTQLSSNLFGDLLDSVIVDVASECHRIARLGLDRNLEEEEEELRLSAQARVRVADSSNSSEANGKYVVDIFGQTHPSVANEIFDCMNCG

Query:  RSIMAGRFAPHLEKCMGRGRKARPKVTRSSTAAQSRYSRGNPVSAYSLTP
        RSIMAGRFAPHLEKCMGRGRKARPKVTRSSTAAQSRYSRGNPVSAYS  P
Subjt:  RSIMAGRFAPHLEKCMGRGRKARPKVTRSSTAAQSRYSRGNPVSAYSLTP

A0A1S3C599 SAGA-associated factor 114.3e-7498.67Show/hide
Query:  MSMPNEDNASSQTQLSSNLFGDLLDSVIVDVASECHRIARLGLDRNLEEEEEELRLSAQARVRVADSSNSSEANGKYVVDIFGQTHPSVANEIFDCMNCG
        MSMPNEDNASSQTQLSSNLFGDLLDSVIVDVASECHRIARLGLDRNLEEEEEELRLSAQARVRVADSSNSSEANGKYVVDIFGQTHPSVANEIFDCMNCG
Subjt:  MSMPNEDNASSQTQLSSNLFGDLLDSVIVDVASECHRIARLGLDRNLEEEEEELRLSAQARVRVADSSNSSEANGKYVVDIFGQTHPSVANEIFDCMNCG

Query:  RSIMAGRFAPHLEKCMGRGRKARPKVTRSSTAAQSRYSRGNPVSAYSLTP
        RSIMAGRFAPHLEKCMGRGRKARPKVTRSSTAAQSRYSRGNPVSAYS  P
Subjt:  RSIMAGRFAPHLEKCMGRGRKARPKVTRSSTAAQSRYSRGNPVSAYSLTP

A0A5D3BBT0 SAGA-associated factor 114.3e-7498.67Show/hide
Query:  MSMPNEDNASSQTQLSSNLFGDLLDSVIVDVASECHRIARLGLDRNLEEEEEELRLSAQARVRVADSSNSSEANGKYVVDIFGQTHPSVANEIFDCMNCG
        MSMPNEDNASSQTQLSSNLFGDLLDSVIVDVASECHRIARLGLDRNLEEEEEELRLSAQARVRVADSSNSSEANGKYVVDIFGQTHPSVANEIFDCMNCG
Subjt:  MSMPNEDNASSQTQLSSNLFGDLLDSVIVDVASECHRIARLGLDRNLEEEEEELRLSAQARVRVADSSNSSEANGKYVVDIFGQTHPSVANEIFDCMNCG

Query:  RSIMAGRFAPHLEKCMGRGRKARPKVTRSSTAAQSRYSRGNPVSAYSLTP
        RSIMAGRFAPHLEKCMGRGRKARPKVTRSSTAAQSRYSRGNPVSAYS  P
Subjt:  RSIMAGRFAPHLEKCMGRGRKARPKVTRSSTAAQSRYSRGNPVSAYSLTP

A0A6J1DBL8 SAGA-associated factor 117.1e-6993.88Show/hide
Query:  MSMPNEDNASSQTQLSSNLFGDLLDSVIVDVASECHRIARLGLDRNLEEEEEELRLSAQARVRVADSSNSSEANGKYVVDIFGQTHPSVANEIFDCMNCG
        MSMPNE++ASS TQLSSN FGDLLDSVIVDVASECHRIARLGLDRNLEEEEEELRLSAQARVRVADSSNSSEANGKY+VDIFGQTHPSVANEIFDCMNCG
Subjt:  MSMPNEDNASSQTQLSSNLFGDLLDSVIVDVASECHRIARLGLDRNLEEEEEELRLSAQARVRVADSSNSSEANGKYVVDIFGQTHPSVANEIFDCMNCG

Query:  RSIMAGRFAPHLEKCMGRGRKARPKVTRSSTAAQSRYSRGNPVSAYS
        RSIMAGRFAPHLEKCMGRGRKAR KVTRSSTAAQ RYSRG+PV AYS
Subjt:  RSIMAGRFAPHLEKCMGRGRKARPKVTRSSTAAQSRYSRGNPVSAYS

A0A6J1I624 SAGA-associated factor 114.6e-6893.33Show/hide
Query:  MSMPNEDNASSQTQLSSNLFGDLLDSVIVDVASECHRIARLGLDRNLEEEEEELRLSAQARVRVADSSNSSEANGKYVVDIFGQTHPSVANEIFDCMNCG
        MSMP+ED+ASS TQLS NLFGDLLDSVI DVASECHRIARLGLDRNLEEEEEELRLSAQAR RVADS NSSEANGKYVVDIFGQTHPSVANEIFDCMNCG
Subjt:  MSMPNEDNASSQTQLSSNLFGDLLDSVIVDVASECHRIARLGLDRNLEEEEEELRLSAQARVRVADSSNSSEANGKYVVDIFGQTHPSVANEIFDCMNCG

Query:  RSIMAGRFAPHLEKCMGRGRKARPKVTRSSTAAQSRYSRGNPVSAYSLTP
        RSIMAGRFAPHLEKCMGRGRKARPKVTRSSTAAQSRYSRGNPVS YS  P
Subjt:  RSIMAGRFAPHLEKCMGRGRKARPKVTRSSTAAQSRYSRGNPVSAYSLTP

SwissProt top hitse value%identityAlignment
A1L209 Ataxin-7-like protein 31.4e-0833.33Show/hide
Query:  MSMPNEDNASSQTQLSSNLFGDLLDSVIVDVASECHRIARLGLDRNLEEEEEELRLSAQARVRVADSSNSSEANGKYVVDIFGQTHPSVANEIFDCMNCG
        MS+   DN   +  L+ +++ DL++   + +  E HR  + G    L+E ++E             S    E   +  VDIFGQ +    N+   C NC 
Subjt:  MSMPNEDNASSQTQLSSNLFGDLLDSVIVDVASECHRIARLGLDRNLEEEEEELRLSAQARVRVADSSNSSEANGKYVVDIFGQTHPSVANEIFDCMNCG

Query:  RSIMAGRFAPHLEKCMGRGRKARPKVTRSSTAAQSRYSRGNPVS
        RSI A RFAPHLEKC+G GR        SS  A  R +  N  S
Subjt:  RSIMAGRFAPHLEKCMGRGRKARPKVTRSSTAAQSRYSRGNPVS

B1PM81 SAGA-associated factor 11 homolog2.6e-0731.88Show/hide
Query:  QLSSNLFGDLLDSVIVDVASECHRIARLGLDRNLEEEEEELRLSAQARVRVADSSNSSEANGKYVVDIFGQTHPSVANEIFDCM--NCGRSIMAGRFAPH
        + ++ L+  LLD  +V V  E H + + G   NL   +      ++   R+ D  N          DIFG    S A +  DC   NC R + A RFAPH
Subjt:  QLSSNLFGDLLDSVIVDVASECHRIARLGLDRNLEEEEEELRLSAQARVRVADSSNSSEANGKYVVDIFGQTHPSVANEIFDCM--NCGRSIMAGRFAPH

Query:  LEKCMGRGRKARPKVTRSSTAAQSRYSRGNPVSAYSLT
        LEKCMG GR +    +R     +S  +  +  S+Y  T
Subjt:  LEKCMGRGRKARPKVTRSSTAAQSRYSRGNPVSAYSLT

B4KY72 SAGA-associated factor 11 homolog9.7e-0732.31Show/hide
Query:  LFGDLLDSVIVDVASECHRIARLGLDRNLEEEEEELRLSAQARVRVADSSNSSEANGKYVVDIFGQTHPSVANEIFDCM--NCGRSIMAGRFAPHLEKCM
        LF  LLD V+  +  E H + + G    L+   EE   +A++  R+ +  N         +DIFG    S A +  DC   +C R + A RFAPHLEKCM
Subjt:  LFGDLLDSVIVDVASECHRIARLGLDRNLEEEEEELRLSAQARVRVADSSNSSEANGKYVVDIFGQTHPSVANEIFDCM--NCGRSIMAGRFAPHLEKCM

Query:  GRGRKARPKVTRSSTAAQSRYSRGNPVSAY
        G GR +    +R     +   +  +  S Y
Subjt:  GRGRKARPKVTRSSTAAQSRYSRGNPVSAY

B4LDA6 SAGA-associated factor 11 homolog5.7e-0733.08Show/hide
Query:  LFGDLLDSVIVDVASECHRIARLGLDRNLEEEEEELRLSAQARVRVADSSNSSEANGKYVVDIFGQTHPSVANEIFDCM--NCGRSIMAGRFAPHLEKCM
        LF  LLD V+  +  E H + + G    L+   EE   +A++  R+ +  N         +DIFG    S A +  DC   NC R + A RFAPHLEKCM
Subjt:  LFGDLLDSVIVDVASECHRIARLGLDRNLEEEEEELRLSAQARVRVADSSNSSEANGKYVVDIFGQTHPSVANEIFDCM--NCGRSIMAGRFAPHLEKCM

Query:  GRGRKARPKVTRSSTAAQSRYSRGNPVSAY
        G GR +    +R     +   +     S Y
Subjt:  GRGRKARPKVTRSSTAAQSRYSRGNPVSAY

Q94BV2 SAGA-associated factor 112.2e-5170.34Show/hide
Query:  EDNASSQTQLSSNLFGDLLDSVIVDVASECHRIARLGLDRNLEEEEEELRLSAQARVRVADSSNSSEANGKYVVDIFGQTHPSVANEIFDCMNCGRSIMA
        EDN SS  QLSS +F DL+DSVI DVASECHR+ARLGLDR+L+  EEELRLS +AR ++AD SN+ E N KYVVDIFGQTHP VA+E+F+CMNCGR I+A
Subjt:  EDNASSQTQLSSNLFGDLLDSVIVDVASECHRIARLGLDRNLEEEEEELRLSAQARVRVADSSNSSEANGKYVVDIFGQTHPSVANEIFDCMNCGRSIMA

Query:  GRFAPHLEKCMGRGRKARPKVTRSSTAAQSRYSRGNPVSAYSLTP
        GRFAPHLEKCMG+GRKAR K TRS+TAAQ+R +R +P   YS  P
Subjt:  GRFAPHLEKCMGRGRKARPKVTRSSTAAQSRYSRGNPVSAYSLTP

Arabidopsis top hitse value%identityAlignment
AT5G58575.1 CONTAINS InterPro DOMAIN/s: Sgf11, transcriptional regulation (InterPro:IPR013246); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).1.6e-5270.34Show/hide
Query:  EDNASSQTQLSSNLFGDLLDSVIVDVASECHRIARLGLDRNLEEEEEELRLSAQARVRVADSSNSSEANGKYVVDIFGQTHPSVANEIFDCMNCGRSIMA
        EDN SS  QLSS +F DL+DSVI DVASECHR+ARLGLDR+L+  EEELRLS +AR ++AD SN+ E N KYVVDIFGQTHP VA+E+F+CMNCGR I+A
Subjt:  EDNASSQTQLSSNLFGDLLDSVIVDVASECHRIARLGLDRNLEEEEEELRLSAQARVRVADSSNSSEANGKYVVDIFGQTHPSVANEIFDCMNCGRSIMA

Query:  GRFAPHLEKCMGRGRKARPKVTRSSTAAQSRYSRGNPVSAYSLTP
        GRFAPHLEKCMG+GRKAR K TRS+TAAQ+R +R +P   YS  P
Subjt:  GRFAPHLEKCMGRGRKARPKVTRSSTAAQSRYSRGNPVSAYSLTP


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCAATGCCTAATGAGGACAATGCATCTTCACAAACTCAGCTTTCATCTAATTTGTTTGGGGATCTCCTGGATTCCGTGATTGTTGATGTTGCATCGGAATGCCATCG
AATAGCAAGGTTAGGTCTTGATCGTAACTTAGAAGAGGAAGAAGAAGAATTAAGACTTTCAGCACAAGCACGAGTAAGAGTAGCAGATTCTAGCAATAGTAGTGAGGCAA
ACGGCAAATATGTAGTTGATATTTTTGGACAAACTCATCCATCTGTTGCCAACGAGATATTTGATTGCATGAATTGTGGTCGATCAATTATGGCTGGGAGATTTGCCCCT
CATTTAGAGAAATGCATGGGAAGGGGTAGAAAGGCTCGTCCCAAAGTAACGAGAAGTAGTACAGCTGCTCAGAGCCGATATTCACGAGGCAATCCTGTTTCTGCATATTC
CCTTACCCCAATTCCACCAGCACGAATCGCTTACCTAATGGAACATCTAGTCTTGCAGGGGAGGAGTACTCAAATGGTACATCTGAAGACCCATGAACAGTAG
mRNA sequenceShow/hide mRNA sequence
CTCTTCTTCTTCTCGATGAAACTTCCCTCTTTCTTCAATCTTCTCCTATCCTACTGTCTTTGGATTTCTACACTCTTTCCATTTTTGCTTCGAATTCAACTTCATACAAG
CCTATATTGAAACTTCTTCTGCTTCTAGATCCATGTCAATGCCTAATGAGGACAATGCATCTTCACAAACTCAGCTTTCATCTAATTTGTTTGGGGATCTCCTGGATTCC
GTGATTGTTGATGTTGCATCGGAATGCCATCGAATAGCAAGGTTAGGTCTTGATCGTAACTTAGAAGAGGAAGAAGAAGAATTAAGACTTTCAGCACAAGCACGAGTAAG
AGTAGCAGATTCTAGCAATAGTAGTGAGGCAAACGGCAAATATGTAGTTGATATTTTTGGACAAACTCATCCATCTGTTGCCAACGAGATATTTGATTGCATGAATTGTG
GTCGATCAATTATGGCTGGGAGATTTGCCCCTCATTTAGAGAAATGCATGGGAAGGGGTAGAAAGGCTCGTCCCAAAGTAACGAGAAGTAGTACAGCTGCTCAGAGCCGA
TATTCACGAGGCAATCCTGTTTCTGCATATTCCCTTACCCCAATTCCACCAGCACGAATCGCTTACCTAATGGAACATCTAGTCTTGCAGGGGAGGAGTACTCAAATGGT
ACATCTGAAGACCCATGAACAGTAGAGCAATGGTCGAATGATTCCAATTTGAGAAAACATACTGTAATCTTAACATGCGCACAGGAATATAATGATATCTCCTGTCATGT
TCAGTTTTACATTACATGACTTCTTTGTATGAGTTATCATTACGTGGGAAAAAAAATATATCATGTCTGGAATCTATACTATGAATTCATTACTTTGAACTGTTCCAAAT
TTTGATGATGAAGATCTTGTACAGAAGTTCGAAGAAA
Protein sequenceShow/hide protein sequence
MSMPNEDNASSQTQLSSNLFGDLLDSVIVDVASECHRIARLGLDRNLEEEEEELRLSAQARVRVADSSNSSEANGKYVVDIFGQTHPSVANEIFDCMNCGRSIMAGRFAP
HLEKCMGRGRKARPKVTRSSTAAQSRYSRGNPVSAYSLTPIPPARIAYLMEHLVLQGRSTQMVHLKTHEQ