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IVF0002377 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0002377
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionWRKY transcription factor 55
Genome locationchr10:12970566..12970868
RNA-Seq ExpressionIVF0002377
SyntenyIVF0002377
Gene Ontology termsGO:0006355 - regulation of transcription, DNA-templated (biological process)
GO:0005634 - nucleus (cellular component)
GO:0003700 - DNA-binding transcription factor activity (molecular function)
GO:0043565 - sequence-specific DNA binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
AZU90767.1 WRKY transcription factor 20 [Siraitia grosvenorii]1.87e-2761.68Show/hide
Query:  MSATAPSAPPPPPLATGQPISQLIHPASAAWLSMDVV------GSGSKSGAPCSVRYGKEVGDQFAVVDMADVMFNSGTSSSNSMDSIFAAYVAEDH-KW
        MS+TAPSAPPPP     Q ++Q   P    WLSM+        GSG  S  P +VRYGK+V DQF V+DMAD MFNSG+ SSNSMDSIFAA VAEDH KW
Subjt:  MSATAPSAPPPPPLATGQPISQLIHPASAAWLSMDVV------GSGSKSGAPCSVRYGKEVGDQFAVVDMADVMFNSGTSSSNSMDSIFAAYVAEDH-KW

Query:  EKEDKKN
        EK+DKKN
Subjt:  EKEDKKN

KAE8648055.1 hypothetical protein Csa_005830 [Cucumis sativus]9.90e-4987.88Show/hide
Query:  MSATAPSAPPPPPLATGQPISQLIHPASAAWLSMDVVGSGSKSGAPCSVRYGKEVGDQFAVVDMADVMFNSGTSSSNSMDSIFAAYVAEDHKWEKEDKK
        MSATAPSAPPPPPL T QPIS   HPA A WLSMDVVGSGS SGAP +VRYGK+VGDQFAVVDMADVMFNSGTSSSNSMDSIFAAYV EDHKWEKEDKK
Subjt:  MSATAPSAPPPPPLATGQPISQLIHPASAAWLSMDVVGSGSKSGAPCSVRYGKEVGDQFAVVDMADVMFNSGTSSSNSMDSIFAAYVAEDHKWEKEDKK

XP_004146468.1 WRKY transcription factor 55 [Cucumis sativus]5.84e-4687.88Show/hide
Query:  MSATAPSAPPPPPLATGQPISQLIHPASAAWLSMDVVGSGSKSGAPCSVRYGKEVGDQFAVVDMADVMFNSGTSSSNSMDSIFAAYVAEDHKWEKEDKK
        MSATAPSAPPPPPL T QPIS   HPA A WLSMDVVGSGS SGAP +VRYGK+VGDQFAVVDMADVMFNSGTSSSNSMDSIFAAYV EDHKWEKEDKK
Subjt:  MSATAPSAPPPPPLATGQPISQLIHPASAAWLSMDVVGSGSKSGAPCSVRYGKEVGDQFAVVDMADVMFNSGTSSSNSMDSIFAAYVAEDHKWEKEDKK

XP_008456967.1 PREDICTED: WRKY transcription factor 55 [Cucumis melo]1.63e-59100Show/hide
Query:  MSATAPSAPPPPPLATGQPISQLIHPASAAWLSMDVVGSGSKSGAPCSVRYGKEVGDQFAVVDMADVMFNSGTSSSNSMDSIFAAYVAEDHKWEKEDKKN
        MSATAPSAPPPPPLATGQPISQLIHPASAAWLSMDVVGSGSKSGAPCSVRYGKEVGDQFAVVDMADVMFNSGTSSSNSMDSIFAAYVAEDHKWEKEDKKN
Subjt:  MSATAPSAPPPPPLATGQPISQLIHPASAAWLSMDVVGSGSKSGAPCSVRYGKEVGDQFAVVDMADVMFNSGTSSSNSMDSIFAAYVAEDHKWEKEDKKN

XP_038893186.1 WRKY transcription factor 55 [Benincasa hispida]1.59e-3673.53Show/hide
Query:  MSATAPSAPPPPPLATGQPISQLIHPASAAWLSMDVVGSGSKSGAPCSVRYGKEVGDQFAVVDMADVMFNSGTSSSNSMDSIFAAYVAED--HKWEKEDK
        MSATAPSA PPP +A GQ  SQ   P SA WLSM+VV SGS SG P +VRYGK+V DQF V+DMADVMFNSGT+SSNSMDSIFAAYV +D  HKWEK+DK
Subjt:  MSATAPSAPPPPPLATGQPISQLIHPASAAWLSMDVVGSGSKSGAPCSVRYGKEVGDQFAVVDMADVMFNSGTSSSNSMDSIFAAYVAED--HKWEKEDK

Query:  KN
        KN
Subjt:  KN

TrEMBL top hitse value%identityAlignment
A0A0A0KQP9 Uncharacterized protein6.0e-2592.42Show/hide
Query:  MDVVGSGSKSGAPCSVRYGKEVGDQFAVVDMADVMFNSGTSSSNSMDSIFAAYVAEDHKWEKEDKK
        MDVVGSGS SGAP +VRYGK+VGDQFAVVDMADVMFNSGTSSSNSMDSIFAAYV EDHKWEKEDKK
Subjt:  MDVVGSGSKSGAPCSVRYGKEVGDQFAVVDMADVMFNSGTSSSNSMDSIFAAYVAEDHKWEKEDKK

A0A1S3C4H9 WRKY transcription factor 555.5e-47100Show/hide
Query:  MSATAPSAPPPPPLATGQPISQLIHPASAAWLSMDVVGSGSKSGAPCSVRYGKEVGDQFAVVDMADVMFNSGTSSSNSMDSIFAAYVAEDHKWEKEDKKN
        MSATAPSAPPPPPLATGQPISQLIHPASAAWLSMDVVGSGSKSGAPCSVRYGKEVGDQFAVVDMADVMFNSGTSSSNSMDSIFAAYVAEDHKWEKEDKKN
Subjt:  MSATAPSAPPPPPLATGQPISQLIHPASAAWLSMDVVGSGSKSGAPCSVRYGKEVGDQFAVVDMADVMFNSGTSSSNSMDSIFAAYVAEDHKWEKEDKKN

A0A3T0I8G3 WRKY transcription factor 203.6e-2261.68Show/hide
Query:  MSATAPSAPPPPPLATGQPISQLIHPASAAWLSMDV------VGSGSKSGAPCSVRYGKEVGDQFAVVDMADVMFNSGTSSSNSMDSIFAAYVAED-HKW
        MS+TAPSAPPPP     Q ++Q   P    WLSM+        GSG  S  P +VRYGK+V DQF V+DMAD MFNSG+ SSNSMDSIFAA VAED HKW
Subjt:  MSATAPSAPPPPPLATGQPISQLIHPASAAWLSMDV------VGSGSKSGAPCSVRYGKEVGDQFAVVDMADVMFNSGTSSSNSMDSIFAAYVAED-HKW

Query:  EKEDKKN
        EK+DKKN
Subjt:  EKEDKKN

A0A6J1CZA4 WRKY transcription factor 558.3e-1962.75Show/hide
Query:  MSATAPSAPPPPPLATGQPISQLIHPASAAWLSMDVVGSGSKSGAPCSVRYGKE-VGDQFAVVDMADVMFNSGTSSSNSMDSIFAAYVAED-HKWEKEDK
        MSATAPSA  PP +A  Q ++Q   P S  WLSMD  GS + SGAP + RYG++  GDQF V+DMAD MFNSG+ SSNSMDSIFAA VAE+ HKW+K+D 
Subjt:  MSATAPSAPPPPPLATGQPISQLIHPASAAWLSMDVVGSGSKSGAPCSVRYGKE-VGDQFAVVDMADVMFNSGTSSSNSMDSIFAAYVAED-HKWEKEDK

Query:  KN
        KN
Subjt:  KN

A0A6J1K6A5 WRKY transcription factor 552.7e-1755.66Show/hide
Query:  MSATAPSAPPPP---PLATGQPISQLIHPASAAWLSMDVVGSGSKSGAPCSVRYGKEVGDQFAVVDMADVMFNSGTSSSNSMDSIFAAYVAED---HKWE
        MSATAPSAPPPP   P   G  ++Q   P S+ WLSM+        G P ++R  K+VGDQF V+DM D MFNSGT SSNS+DSIF A V E+   HKWE
Subjt:  MSATAPSAPPPP---PLATGQPISQLIHPASAAWLSMDVVGSGSKSGAPCSVRYGKEVGDQFAVVDMADVMFNSGTSSSNSMDSIFAAYVAED---HKWE

Query:  KEDKKN
        K++KKN
Subjt:  KEDKKN

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCCGCCACCGCCCCCTCCGCTCCCCCGCCGCCACCCCTCGCCACCGGCCAACCCATCTCCCAGTTAATTCACCCCGCCTCCGCTGCCTGGCTTTCCATGGATGTCGT
CGGTTCAGGGTCGAAATCCGGCGCCCCGTGCAGCGTACGGTACGGAAAAGAAGTGGGGGATCAGTTTGCGGTGGTGGACATGGCTGACGTGATGTTCAATTCCGGGACCA
GCAGTAGTAATAGTATGGACTCTATCTTTGCCGCTTATGTGGCGGAGGATCACAAGTGGGAGAAAGAGGACAAGAAGAATTAG
mRNA sequenceShow/hide mRNA sequence
ATGTCCGCCACCGCCCCCTCCGCTCCCCCGCCGCCACCCCTCGCCACCGGCCAACCCATCTCCCAGTTAATTCACCCCGCCTCCGCTGCCTGGCTTTCCATGGATGTCGT
CGGTTCAGGGTCGAAATCCGGCGCCCCGTGCAGCGTACGGTACGGAAAAGAAGTGGGGGATCAGTTTGCGGTGGTGGACATGGCTGACGTGATGTTCAATTCCGGGACCA
GCAGTAGTAATAGTATGGACTCTATCTTTGCCGCTTATGTGGCGGAGGATCACAAGTGGGAGAAAGAGGACAAGAAGAATTAG
Protein sequenceShow/hide protein sequence
MSATAPSAPPPPPLATGQPISQLIHPASAAWLSMDVVGSGSKSGAPCSVRYGKEVGDQFAVVDMADVMFNSGTSSSNSMDSIFAAYVAEDHKWEKEDKKN