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IVF0002403 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0002403
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionDynein light chain
Genome locationchr04:31448944..31449917
RNA-Seq ExpressionIVF0002403
SyntenyIVF0002403
Gene Ontology termsGO:0007017 - microtubule-based process (biological process)
GO:0005737 - cytoplasm (cellular component)
GO:0005874 - microtubule (cellular component)
GO:0030286 - dynein complex (cellular component)
GO:0045505 - dynein intermediate chain binding (molecular function)
GO:0051959 - dynein light intermediate chain binding (molecular function)
InterPro domainsIPR001372 - Dynein light chain, type 1/2
IPR037177 - Dynein light chain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA8518956.1 hypothetical protein F0562_016270 [Nyssa sinensis]1.89e-5877.57Show/hide
Query:  MLEGKAVVRETDMPQGIQSHVLELAYKALDQHEVSDCQSIAHFIKQRFDEAYGPAWHCVAGKAFGGCITHLCGSFIFFHVDTMEFLVFKDGRDCSKSVEE
        MLEGKAV+RETDMP+ +QSHV+ELAY+ALD HE SDCQSIAH+IKQ+FDEAYGPAWHCV GK FG CITHLCGSFIFF VD MEFLVFKDG+D ++S EE
Subjt:  MLEGKAVVRETDMPQGIQSHVLELAYKALDQHEVSDCQSIAHFIKQRFDEAYGPAWHCVAGKAFGGCITHLCGSFIFFHVDTMEFLVFKDGRDCSKSVEE

Query:  TVGVCRK
         +GV +K
Subjt:  TVGVCRK

KGN58830.1 hypothetical protein Csa_001625 [Cucumis sativus]1.32e-7598.15Show/hide
Query:  MLEGKAVVRETDMPQGIQSHVLELAYKALDQHEVSDCQSIAHFIKQRFDEAYGPAWHCVAGKAFGGCITHLCGSFIFFHVDTMEFLVFKDGRDCSKSVEE
        MLEGKAVVRETDMPQGIQSHVLELAYKALDQHEVSDCQSIAHFIKQRFDEAYGPAWHCVAGKAFGGCITHLCGS+IFFHVDTMEFLVFKDGRDC KSVEE
Subjt:  MLEGKAVVRETDMPQGIQSHVLELAYKALDQHEVSDCQSIAHFIKQRFDEAYGPAWHCVAGKAFGGCITHLCGSFIFFHVDTMEFLVFKDGRDCSKSVEE

Query:  TVGVCRKY
        TVGVCRKY
Subjt:  TVGVCRKY

XP_008442502.1 PREDICTED: dynein light chain 1, cytoplasmic-like [Cucumis melo]5.60e-77100Show/hide
Query:  MLEGKAVVRETDMPQGIQSHVLELAYKALDQHEVSDCQSIAHFIKQRFDEAYGPAWHCVAGKAFGGCITHLCGSFIFFHVDTMEFLVFKDGRDCSKSVEE
        MLEGKAVVRETDMPQGIQSHVLELAYKALDQHEVSDCQSIAHFIKQRFDEAYGPAWHCVAGKAFGGCITHLCGSFIFFHVDTMEFLVFKDGRDCSKSVEE
Subjt:  MLEGKAVVRETDMPQGIQSHVLELAYKALDQHEVSDCQSIAHFIKQRFDEAYGPAWHCVAGKAFGGCITHLCGSFIFFHVDTMEFLVFKDGRDCSKSVEE

Query:  TVGVCRKY
        TVGVCRKY
Subjt:  TVGVCRKY

XP_010088565.1 dynein light chain 1, cytoplasmic [Morus notabilis]1.55e-5776.64Show/hide
Query:  MLEGKAVVRETDMPQGIQSHVLELAYKALDQHEVSDCQSIAHFIKQRFDEAYGPAWHCVAGKAFGGCITHLCGSFIFFHVDTMEFLVFKDGRDCSKSVEE
        MLEGKAVVRETDM Q +QSHV+ELAYKALD HEVSDCQSIAH+IKQ+FDEAYGPAWHCV G  FG CITHLCGSFIFFHV+ MEFL+FKDG+D ++S +E
Subjt:  MLEGKAVVRETDMPQGIQSHVLELAYKALDQHEVSDCQSIAHFIKQRFDEAYGPAWHCVAGKAFGGCITHLCGSFIFFHVDTMEFLVFKDGRDCSKSVEE

Query:  TVGVCRK
         +GV ++
Subjt:  TVGVCRK

XP_022145583.1 dynein light chain-like [Momordica charantia]2.68e-6688.79Show/hide
Query:  MLEGKAVVRETDMPQGIQSHVLELAYKALDQHEVSDCQSIAHFIKQRFDEAYGPAWHCVAGKAFGGCITHLCGSFIFFHVDTMEFLVFKDGRDCSKSVEE
        MLEGKA VRETDMP+GIQSHVLELAYKALD HEVSDCQSIA FIKQRFDEAYGPAWHCV GKAFGGCITHLCGSFIFFHVD MEFL+FKDGRD SKS+EE
Subjt:  MLEGKAVVRETDMPQGIQSHVLELAYKALDQHEVSDCQSIAHFIKQRFDEAYGPAWHCVAGKAFGGCITHLCGSFIFFHVDTMEFLVFKDGRDCSKSVEE

Query:  TVGVCRK
        T+GV +K
Subjt:  TVGVCRK

TrEMBL top hitse value%identityAlignment
A0A0A0LA26 Dynein light chain1.1e-5698.15Show/hide
Query:  MLEGKAVVRETDMPQGIQSHVLELAYKALDQHEVSDCQSIAHFIKQRFDEAYGPAWHCVAGKAFGGCITHLCGSFIFFHVDTMEFLVFKDGRDCSKSVEE
        MLEGKAVVRETDMPQGIQSHVLELAYKALDQHEVSDCQSIAHFIKQRFDEAYGPAWHCVAGKAFGGCITHLCGS+IFFHVDTMEFLVFKDGRDC KSVEE
Subjt:  MLEGKAVVRETDMPQGIQSHVLELAYKALDQHEVSDCQSIAHFIKQRFDEAYGPAWHCVAGKAFGGCITHLCGSFIFFHVDTMEFLVFKDGRDCSKSVEE

Query:  TVGVCRKY
        TVGVCRKY
Subjt:  TVGVCRKY

A0A1S3B5U2 Dynein light chain9.8e-58100Show/hide
Query:  MLEGKAVVRETDMPQGIQSHVLELAYKALDQHEVSDCQSIAHFIKQRFDEAYGPAWHCVAGKAFGGCITHLCGSFIFFHVDTMEFLVFKDGRDCSKSVEE
        MLEGKAVVRETDMPQGIQSHVLELAYKALDQHEVSDCQSIAHFIKQRFDEAYGPAWHCVAGKAFGGCITHLCGSFIFFHVDTMEFLVFKDGRDCSKSVEE
Subjt:  MLEGKAVVRETDMPQGIQSHVLELAYKALDQHEVSDCQSIAHFIKQRFDEAYGPAWHCVAGKAFGGCITHLCGSFIFFHVDTMEFLVFKDGRDCSKSVEE

Query:  TVGVCRKY
        TVGVCRKY
Subjt:  TVGVCRKY

A0A5J4ZMN8 Dynein light chain8.1e-4477.57Show/hide
Query:  MLEGKAVVRETDMPQGIQSHVLELAYKALDQHEVSDCQSIAHFIKQRFDEAYGPAWHCVAGKAFGGCITHLCGSFIFFHVDTMEFLVFKDGRDCSKSVEE
        MLEGKAV+RETDMP+ +QSHV+ELAY+ALD HE SDCQSIAH+IKQ+FDEAYGPAWHCV GK FG CITHLCGSFIFF VD MEFLVFKDG+D ++S EE
Subjt:  MLEGKAVVRETDMPQGIQSHVLELAYKALDQHEVSDCQSIAHFIKQRFDEAYGPAWHCVAGKAFGGCITHLCGSFIFFHVDTMEFLVFKDGRDCSKSVEE

Query:  TVGVCRK
         +GV +K
Subjt:  TVGVCRK

A0A6J1CWC6 Dynein light chain9.9e-5088.79Show/hide
Query:  MLEGKAVVRETDMPQGIQSHVLELAYKALDQHEVSDCQSIAHFIKQRFDEAYGPAWHCVAGKAFGGCITHLCGSFIFFHVDTMEFLVFKDGRDCSKSVEE
        MLEGKA VRETDMP+GIQSHVLELAYKALD HEVSDCQSIA FIKQRFDEAYGPAWHCV GKAFGGCITHLCGSFIFFHVD MEFL+FKDGRD SKS+EE
Subjt:  MLEGKAVVRETDMPQGIQSHVLELAYKALDQHEVSDCQSIAHFIKQRFDEAYGPAWHCVAGKAFGGCITHLCGSFIFFHVDTMEFLVFKDGRDCSKSVEE

Query:  TVGVCRK
        T+GV +K
Subjt:  TVGVCRK

W9QN85 Dynein light chain4.0e-4376.64Show/hide
Query:  MLEGKAVVRETDMPQGIQSHVLELAYKALDQHEVSDCQSIAHFIKQRFDEAYGPAWHCVAGKAFGGCITHLCGSFIFFHVDTMEFLVFKDGRDCSKSVEE
        MLEGKAVVRETDM Q +QSHV+ELAYKALD HEVSDCQSIAH+IKQ+FDEAYGPAWHCV G  FG CITHLCGSFIFFHV+ MEFL+FKDG+D ++S +E
Subjt:  MLEGKAVVRETDMPQGIQSHVLELAYKALDQHEVSDCQSIAHFIKQRFDEAYGPAWHCVAGKAFGGCITHLCGSFIFFHVDTMEFLVFKDGRDCSKSVEE

Query:  TVGVCRK
         +GV ++
Subjt:  TVGVCRK

SwissProt top hitse value%identityAlignment
O02414 Dynein light chain LC6, flagellar outer arm1.3e-1438.46Show/hide
Query:  MLEGKAVVRETDMPQGIQSHVLELAYKALDQHEVSDCQSIAHFIKQRFDEAYGPAWHCVAGKAFGGCITHLCGSFIFFHVDTMEFLVFKDG
        M E KAV++  DMP+ +Q   ++ A +AL++  +   + IA +IK+ FD+ Y P WHC+ G+ FG  +TH    FI+F++  +  L+FK G
Subjt:  MLEGKAVVRETDMPQGIQSHVLELAYKALDQHEVSDCQSIAHFIKQRFDEAYGPAWHCVAGKAFGGCITHLCGSFIFFHVDTMEFLVFKDG

O96860 Dynein light chain 2, cytoplasmic4.9e-1437.36Show/hide
Query:  MLEGKAVVRETDMPQGIQSHVLELAYKALDQHEVSDCQSIAHFIKQRFDEAYGPAWHCVAGKAFGGCITHLCGSFIFFHVDTMEFLVFKDG
        M + KAV++  DM + +Q   ++ A +AL+++ +   + IA FIK+ FD+ Y P WHC+ G+ FG  +TH    FI+F++  +  L+FK G
Subjt:  MLEGKAVVRETDMPQGIQSHVLELAYKALDQHEVSDCQSIAHFIKQRFDEAYGPAWHCVAGKAFGGCITHLCGSFIFFHVDTMEFLVFKDG

Q22799 Dynein light chain 1, cytoplasmic4.9e-1436.26Show/hide
Query:  MLEGKAVVRETDMPQGIQSHVLELAYKALDQHEVSDCQSIAHFIKQRFDEAYGPAWHCVAGKAFGGCITHLCGSFIFFHVDTMEFLVFKDG
        M++ KAV++  DM   +Q   ++ A +AL+++ +   + IA +IK+ FD+ Y P WHC+ G+ FG  +TH    FI+F++  +  L+FK G
Subjt:  MLEGKAVVRETDMPQGIQSHVLELAYKALDQHEVSDCQSIAHFIKQRFDEAYGPAWHCVAGKAFGGCITHLCGSFIFFHVDTMEFLVFKDG

Q94748 Probable dynein light chain9.9e-1540.66Show/hide
Query:  MLEGKAVVRETDMPQGIQSHVLELAYKALDQHEVSDCQSIAHFIKQRFDEAYGPAWHCVAGKAFGGCITHLCGSFIFFHVDTMEFLVFKDG
        M E KAV++  DM + +Q   +  A  ALD++E+   + +A +IK+ FD  Y P WHC+ GK FG  +TH    FI+F++    FL+FK G
Subjt:  MLEGKAVVRETDMPQGIQSHVLELAYKALDQHEVSDCQSIAHFIKQRFDEAYGPAWHCVAGKAFGGCITHLCGSFIFFHVDTMEFLVFKDG

Q94758 Dynein light chain4.4e-1540.66Show/hide
Query:  MLEGKAVVRETDMPQGIQSHVLELAYKALDQHEVSDCQSIAHFIKQRFDEAYGPAWHCVAGKAFGGCITHLCGSFIFFHVDTMEFLVFKDG
        M E KAV++  DM + +Q   + +A  A+D+H++   + IA  IK+ FD  Y P WHC+ G+ FG  +TH   +FI+F++D   FL+FK G
Subjt:  MLEGKAVVRETDMPQGIQSHVLELAYKALDQHEVSDCQSIAHFIKQRFDEAYGPAWHCVAGKAFGGCITHLCGSFIFFHVDTMEFLVFKDG

Arabidopsis top hitse value%identityAlignment
AT1G23220.1 Dynein light chain type 1 family protein3.9e-1440.96Show/hide
Query:  VRETDMPQGIQSHVLELAYKALDQHE-VSDCQSIAHFIKQRFDEAYGPAWHCVAGKAFGGCITHLCGSFIFFHVDTMEFLVFK
        VR +DMP   Q+    L+ + L+     +D + +AH +K+ FD AYGPAWHC+ G +FG  +TH  G F++F +D +  L+FK
Subjt:  VRETDMPQGIQSHVLELAYKALDQHE-VSDCQSIAHFIKQRFDEAYGPAWHCVAGKAFGGCITHLCGSFIFFHVDTMEFLVFK

AT1G52240.2 RHO guanyl-nucleotide exchange factor 114.3e-2150.56Show/hide
Query:  MLEGKAVVRETDMPQGIQSHVLELAYKALDQHEVSDCQSIAHFIKQRFDEAYGPAWHCVAGKAFGGCITHLCGSFIFFHVDTMEFLVFK
        MLEGKA+V ++DMP  +Q   +  A +ALD  +V DC+SIA  IK+ FDE YG  W CV G  FG   TH  G+FI+F ++T++FL+FK
Subjt:  MLEGKAVVRETDMPQGIQSHVLELAYKALDQHEVSDCQSIAHFIKQRFDEAYGPAWHCVAGKAFGGCITHLCGSFIFFHVDTMEFLVFK

AT3G16120.1 Dynein light chain type 1 family protein2.1e-2051.69Show/hide
Query:  MLEGKAVVRETDMPQGIQSHVLELAYKALDQHEVSDCQSIAHFIKQRFDEAYGPAWHCVAGKAFGGCITHLCGSFIFFHVDTMEFLVFK
        MLEGKA V ETDMP  +Q   +++A ++LD  +V D  SIA  IK+ FDE YG  W CV G  FG   TH  G+FI+FH+ T+ FL+FK
Subjt:  MLEGKAVVRETDMPQGIQSHVLELAYKALDQHEVSDCQSIAHFIKQRFDEAYGPAWHCVAGKAFGGCITHLCGSFIFFHVDTMEFLVFK

AT4G27360.1 Dynein light chain type 1 family protein8.9e-1948.31Show/hide
Query:  MLEGKAVVRETDMPQGIQSHVLELAYKALDQHEVSDCQSIAHFIKQRFDEAYGPAWHCVAGKAFGGCITHLCGSFIFFHVDTMEFLVFK
        MLEGKAV+ +TDM Q ++   L LA KALD  +V++   IA FIK+ FD +YG  W C+ G  FG  +TH  G FI F V ++  L+FK
Subjt:  MLEGKAVVRETDMPQGIQSHVLELAYKALDQHEVSDCQSIAHFIKQRFDEAYGPAWHCVAGKAFGGCITHLCGSFIFFHVDTMEFLVFK

AT5G20110.1 Dynein light chain type 1 family protein1.7e-1442.31Show/hide
Query:  DMPQGIQSHVLELAYKALDQHEVSDCQSIAHFIKQRFDEAYGPAWHCVAGKAFGGCITHLCGSFIFFHVDTMEFLVFK
        DMP  +Q+H    A   LD  E    + +A  +K+ FD+ YGPAWHC+ G +FG  +TH  G FI+F +D +  L+FK
Subjt:  DMPQGIQSHVLELAYKALDQHEVSDCQSIAHFIKQRFDEAYGPAWHCVAGKAFGGCITHLCGSFIFFHVDTMEFLVFK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTGGAGGGCAAAGCTGTGGTCCGCGAAACAGACATGCCACAGGGGATCCAGAGCCATGTCCTTGAGTTGGCTTATAAAGCACTTGATCAACACGAAGTTTCTGACTG
TCAATCTATTGCACATTTCATCAAACAGAGGTTTGATGAAGCTTATGGCCCAGCATGGCATTGTGTGGCCGGCAAAGCGTTTGGAGGTTGCATTACACATCTATGTGGGA
GTTTCATCTTCTTCCATGTGGATACGATGGAGTTTCTCGTCTTCAAGGACGGAAGAGACTGCTCCAAAAGTGTCGAAGAGACTGTTGGAGTTTGCCGGAAATATTAA
mRNA sequenceShow/hide mRNA sequence
ATGTTGGAGGGCAAAGCTGTGGTCCGCGAAACAGACATGCCACAGGGGATCCAGAGCCATGTCCTTGAGTTGGCTTATAAAGCACTTGATCAACACGAAGTTTCTGACTG
TCAATCTATTGCACATTTCATCAAACAGAGGTTTGATGAAGCTTATGGCCCAGCATGGCATTGTGTGGCCGGCAAAGCGTTTGGAGGTTGCATTACACATCTATGTGGGA
GTTTCATCTTCTTCCATGTGGATACGATGGAGTTTCTCGTCTTCAAGGACGGAAGAGACTGCTCCAAAAGTGTCGAAGAGACTGTTGGAGTTTGCCGGAAATATTAA
Protein sequenceShow/hide protein sequence
MLEGKAVVRETDMPQGIQSHVLELAYKALDQHEVSDCQSIAHFIKQRFDEAYGPAWHCVAGKAFGGCITHLCGSFIFFHVDTMEFLVFKDGRDCSKSVEETVGVCRKY