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IVF0002420 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0002420
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Descriptionphosphopantothenoylcysteine decarboxylase subunit VHS3-like
Genome locationchr10:11945757..11946071
RNA-Seq ExpressionIVF0002420
SyntenyIVF0002420
Gene Ontology termsGO:0016787 - hydrolase activity (molecular function)
GO:0046872 - metal ion binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0037362.1 phosphopantothenoylcysteine decarboxylase subunit VHS3-like [Cucumis melo var. makuwa]2.08e-1653.27Show/hide
Query:  MEKDDLIDDDPIDFNRIKDEDDDSIDF-YIEDEDDDSIDFYIENEDDDF------IDFYIEDEDDDSIDCDHIEDKDDDPIGWDRFEDEDDDRLGCVALK
        +++DD IDDDPIDFN +KDE DDSID   IEDEDDD I  +   +DD        ++  +E++D    +C  ++D+DDDPIG DRFEDE+D+ LGC  LK
Subjt:  MEKDDLIDDDPIDFNRIKDEDDDSIDF-YIEDEDDDSIDFYIENEDDDF------IDFYIEDEDDDSIDCDHIEDKDDDPIGWDRFEDEDDDRLGCVALK

Query:  MKMMIVS
        +KMMIVS
Subjt:  MKMMIVS

KAA0039603.1 phosphopantothenoylcysteine decarboxylase subunit VHS3-like [Cucumis melo var. makuwa]2.69e-2061.86Show/hide
Query:  DDPIDFNRIKDEDDDSIDF-YIEDEDDDSIDFYIENEDDDFIDFYIEDEDDDSIDCDHIEDKDDDPIGWDRFEDEDDDRLGCVALKMKMMIVSVMLH
        DD IDFN IK EDDDSIDF +I+ EDDDSID             +IEDED D IDC+ IED+DDDPI  D  EDEDDDRLG  ALK++MMI+ V LH
Subjt:  DDPIDFNRIKDEDDDSIDF-YIEDEDDDSIDFYIENEDDDFIDFYIEDEDDDSIDCDHIEDKDDDPIGWDRFEDEDDDRLGCVALKMKMMIVSVMLH

KAA0050091.1 prostatic spermine-binding protein-like [Cucumis melo var. makuwa]3.94e-1575Show/hide
Query:  IEDEDDDSIDCDHIEDKDDDPIGWDRFEDEDDDRLGCVALKMKMMIVSVMLH
        I+DEDDDS+DCD IED+DDDPI  DRFEDEDDD LG   LKM+MMIVS  LH
Subjt:  IEDEDDDSIDCDHIEDKDDDPIGWDRFEDEDDDRLGCVALKMKMMIVSVMLH

XP_008456992.1 PREDICTED: phosphopantothenoylcysteine decarboxylase subunit VHS3-like [Cucumis melo]9.41e-59100Show/hide
Query:  MEKDDLIDDDPIDFNRIKDEDDDSIDFYIEDEDDDSIDFYIENEDDDFIDFYIEDEDDDSIDCDHIEDKDDDPIGWDRFEDEDDDRLGCVALKMKMMIVS
        MEKDDLIDDDPIDFNRIKDEDDDSIDFYIEDEDDDSIDFYIENEDDDFIDFYIEDEDDDSIDCDHIEDKDDDPIGWDRFEDEDDDRLGCVALKMKMMIVS
Subjt:  MEKDDLIDDDPIDFNRIKDEDDDSIDFYIEDEDDDSIDFYIENEDDDFIDFYIEDEDDDSIDCDHIEDKDDDPIGWDRFEDEDDDRLGCVALKMKMMIVS

Query:  V
        V
Subjt:  V

XP_016902073.1 PREDICTED: phosphopantothenoylcysteine decarboxylase subunit VHS3-like [Cucumis melo]1.69e-1761.96Show/hide
Query:  DDPIDFNRIKDEDDDSIDF-YIEDEDDDSIDFYIENEDDDFIDFYIEDEDDDSIDCDHIEDKDDDPIGWDRFEDEDDDRLGCVALKMKMMIV
        DD IDFN IK EDDDSIDF +I+ EDDDSID             +IEDED D IDC+ IED+DDDPI  D  EDEDDDRLG  ALK++MMI+
Subjt:  DDPIDFNRIKDEDDDSIDF-YIEDEDDDSIDFYIENEDDDFIDFYIEDEDDDSIDCDHIEDKDDDPIGWDRFEDEDDDRLGCVALKMKMMIV

TrEMBL top hitse value%identityAlignment
A0A1S3C4K1 phosphopantothenoylcysteine decarboxylase subunit VHS3-like1.6e-4499.02Show/hide
Query:  MEKDDLIDDDPIDFNRIKDEDDDSIDFYIEDEDDDSIDFYIENEDDDFIDFYIEDEDDDSIDCDHIEDKDDDPIGWDRFEDEDDDRLGCVALKMKMMIVS
        MEKDDLIDDDPIDFNRIKDEDDDSIDFYIEDEDDDSIDFYIENEDDDFIDFYIEDEDDDSIDCDHIEDKDDDPIGWDRFEDEDDDRLGCVALKMKMMIVS
Subjt:  MEKDDLIDDDPIDFNRIKDEDDDSIDFYIEDEDDDSIDFYIENEDDDFIDFYIEDEDDDSIDCDHIEDKDDDPIGWDRFEDEDDDRLGCVALKMKMMIVS

Query:  VM
        V+
Subjt:  VM

A0A1S4E1H3 phosphopantothenoylcysteine decarboxylase subunit VHS3-like4.2e-1361.29Show/hide
Query:  DDDPIDFNRIKDEDDDSIDF-YIEDEDDDSIDFYIENEDDDFIDFYIEDEDDDSIDCDHIEDKDDDPIGWDRFEDEDDDRLGCVALKMKMMIV
        +DD IDFN IK EDDDSIDF +I+ EDDDSID             +IEDED D IDC+ IED+DDDPI  D  EDEDDDRLG  ALK++MMI+
Subjt:  DDDPIDFNRIKDEDDDSIDF-YIEDEDDDSIDFYIENEDDDFIDFYIEDEDDDSIDCDHIEDKDDDPIGWDRFEDEDDDRLGCVALKMKMMIV

A0A5A7T1P1 Phosphopantothenoylcysteine decarboxylase subunit VHS3-like7.9e-1254.21Show/hide
Query:  MEKDDLIDDDPIDFNRIKDEDDDSIDF-YIEDEDDDSIDFYIENEDDDF----IDFYIEDEDDDSIDCDHIEDKDDDPIGWDRFEDEDDDRLGCVALKMK
        +++DD IDDDPIDFN +KDE DDSID   IEDEDDD I  +   +DD      +   +  E+DD I  + ++D+DDDPIG DRFEDE+D+ LGC  LK+K
Subjt:  MEKDDLIDDDPIDFNRIKDEDDDSIDF-YIEDEDDDSIDFYIENEDDDF----IDFYIEDEDDDSIDCDHIEDKDDDPIGWDRFEDEDDDRLGCVALKMK

Query:  MMIVSVM
        MMIVS +
Subjt:  MMIVSVM

A0A5D3BPS5 Phosphopantothenoylcysteine decarboxylase subunit VHS3-like1.7e-1461.22Show/hide
Query:  DDDPIDFNRIKDEDDDSIDF-YIEDEDDDSIDFYIENEDDDFIDFYIEDEDDDSIDCDHIEDKDDDPIGWDRFEDEDDDRLGCVALKMKMMIVSVMLH
        +DD IDFN IK EDDDSIDF +I+ EDDDSID             +IEDED D IDC+ IED+DDDPI  D  EDEDDDRLG  ALK++MMI+ V LH
Subjt:  DDDPIDFNRIKDEDDDSIDF-YIEDEDDDSIDFYIENEDDDFIDFYIEDEDDDSIDCDHIEDKDDDPIGWDRFEDEDDDRLGCVALKMKMMIVSVMLH

A0A5D3DQ88 Phosphopantothenoylcysteine decarboxylase subunit VHS3-like1.6e-4499.02Show/hide
Query:  MEKDDLIDDDPIDFNRIKDEDDDSIDFYIEDEDDDSIDFYIENEDDDFIDFYIEDEDDDSIDCDHIEDKDDDPIGWDRFEDEDDDRLGCVALKMKMMIVS
        MEKDDLIDDDPIDFNRIKDEDDDSIDFYIEDEDDDSIDFYIENEDDDFIDFYIEDEDDDSIDCDHIEDKDDDPIGWDRFEDEDDDRLGCVALKMKMMIVS
Subjt:  MEKDDLIDDDPIDFNRIKDEDDDSIDFYIEDEDDDSIDFYIENEDDDFIDFYIEDEDDDSIDCDHIEDKDDDPIGWDRFEDEDDDRLGCVALKMKMMIVS

Query:  VM
        V+
Subjt:  VM

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAAAAGGATGATCTTATAGACGATGATCCTATCGACTTCAACCGCATTAAAGATGAAGATGATGATTCTATTGACTTCTACATTGAAGATGAAGATGATGAT
TCTATCGACTTCTACATTGAAAATGAAGATGATGATTTTATCGACTTCTACATTGAGGATGAAGATGATGATTCTATCGATTGCGACCACATTGAAGATAAAGAT
GATGATCCTATCGGCTGGGACCGGTTTGAAGATGAAGATGATGATCGTCTTGGCTGCGTCGCATTGAAGATGAAGATGATGATCGTCTCAGTTATGTTGCATTGA
mRNA sequenceShow/hide mRNA sequence
ATGGAAAAGGATGATCTTATAGACGATGATCCTATCGACTTCAACCGCATTAAAGATGAAGATGATGATTCTATTGACTTCTACATTGAAGATGAAGATGATGAT
TCTATCGACTTCTACATTGAAAATGAAGATGATGATTTTATCGACTTCTACATTGAGGATGAAGATGATGATTCTATCGATTGCGACCACATTGAAGATAAAGAT
GATGATCCTATCGGCTGGGACCGGTTTGAAGATGAAGATGATGATCGTCTTGGCTGCGTCGCATTGAAGATGAAGATGATGATCGTCTCAGTTATGTTGCATTGA
Protein sequenceShow/hide protein sequence
MEKDDLIDDDPIDFNRIKDEDDDSIDFYIEDEDDDSIDFYIENEDDDFIDFYIEDEDDDSIDCDHIEDKDDDPIGWDRFEDEDDDRLGCVALKMKMMIVSVMLH