; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

IVF0002453 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0002453
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionRetrotransposon protein
Genome locationchr12:2656851..2657716
RNA-Seq ExpressionIVF0002453
SyntenyIVF0002453
Gene Ontology termsGO:0016020 - membrane (cellular component)
GO:0046872 - metal ion binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0031555.1 retrotransposon protein [Cucumis melo var. makuwa]9.74e-11065.62Show/hide
Query:  MAEKLPGCSVRATTLIVCTIKTLKRTFQAITEMREPACSGFKWNDEAKYIIVEKEVFDNWIRVRKLIKSLLNKLFSYYDELAYVFEWDRATGRFVETFAD
        MAEKLPGC VRATT+I C IKTLKRTFQAI EMR PACSGF WNDE K I+ EKE+FDNW+R     K LLNK F YYDEL YVF  DRATGRF ETFAD
Subjt:  MAEKLPGCSVRATTLIVCTIKTLKRTFQAITEMREPACSGFKWNDEAKYIIVEKEVFDNWIRVRKLIKSLLNKLFSYYDELAYVFEWDRATGRFVETFAD

Query:  IGSNEPAG-YEGFDMSDGNDIEFPFMYSQGIDISQDDVRTSQPACTSDGRIRSSESKRKRGSQREGELDVINMALKCMNDQLRTIIEWPTRPFANETFVR
        +GSNEP G Y+ FDM DGN+ +FP +YSQG+DISQDDVR S+P+  SDGR  SS SKRKRGSQR+ EL+ I++AL   N+QLR I +WP R  AN+  VR
Subjt:  IGSNEPAG-YEGFDMSDGNDIEFPFMYSQGIDISQDDVRTSQPACTSDGRIRSSESKRKRGSQREGELDVINMALKCMNDQLRTIIEWPTRPFANETFVR

Query:  QEFLRLLCEMPDLSSLDRELCQRQLMCSIDDMRSFVEMTDEERKNFCRVFLRDVSR
         EF R+L EMP+L+SLDR L QR L+  +DD+R FV M ++ER+ FCRV LRD+ R
Subjt:  QEFLRLLCEMPDLSSLDRELCQRQLMCSIDDMRSFVEMTDEERKNFCRVFLRDVSR

KAA0033884.1 retrotransposon protein [Cucumis melo var. makuwa]6.40e-16697.91Show/hide
Query:  VCTIKTLKRTFQAITEMREPACSGFKWNDEAKYIIVEKEVFDNWIRVRKLIKSLLNKLFSYYDELAYVFEWDRATGRFVETFADIGSNEPAGYEGFDMSD
        VCTIKTLKRTFQAITEMREPACSGFKWNDEAKYIIVEKEVFDNWIR     KSLLNKLFSYYDELAYVFEWDRATGRFVETFADIGSNEPAGYEGFDMSD
Subjt:  VCTIKTLKRTFQAITEMREPACSGFKWNDEAKYIIVEKEVFDNWIRVRKLIKSLLNKLFSYYDELAYVFEWDRATGRFVETFADIGSNEPAGYEGFDMSD

Query:  GNDIEFPFMYSQGIDISQDDVRTSQPACTSDGRIRSSESKRKRGSQREGELDVINMALKCMNDQLRTIIEWPTRPFANETFVRQEFLRLLCEMPDLSSLD
        GNDIEFPFMYSQGIDISQDDVRTSQPACTSDGRIRSSESKRKRGSQREGELDVINMALKCMNDQLRTIIEWPTRPFANETFVRQEFLRLLCEMPDLSSLD
Subjt:  GNDIEFPFMYSQGIDISQDDVRTSQPACTSDGRIRSSESKRKRGSQREGELDVINMALKCMNDQLRTIIEWPTRPFANETFVRQEFLRLLCEMPDLSSLD

Query:  RELCQRQLMCSIDDMRSFVEMTDEERKNFCRVFLRDVSR
        RELCQRQLMCSIDDMRSFVEMTDEERKNFCRVFLRDVSR
Subjt:  RELCQRQLMCSIDDMRSFVEMTDEERKNFCRVFLRDVSR

KAA0044610.1 retrotransposon protein [Cucumis melo var. makuwa]4.84e-11066.02Show/hide
Query:  MAEKLPGCSVRATTLIVCTIKTLKRTFQAITEMREPACSGFKWNDEAKYIIVEKEVFDNWIRVRKLIKSLLNKLFSYYDELAYVFEWDRATGRFVETFAD
        MAEKLPGC VRATT+I C IKTLKRTFQAI EMR PACSGF WNDE K I+ EKE+FDNW+R     K LLNK F YYDEL YVF  DRATGRF ETFAD
Subjt:  MAEKLPGCSVRATTLIVCTIKTLKRTFQAITEMREPACSGFKWNDEAKYIIVEKEVFDNWIRVRKLIKSLLNKLFSYYDELAYVFEWDRATGRFVETFAD

Query:  IGSNEPAG-YEGFDMSDGNDIEFPFMYSQGIDISQDDVRTSQPACTSDGRIRSSESKRKRGSQREGELDVINMALKCMNDQLRTIIEWPTRPFANETFVR
        +GSNEP G Y+ FDM DGN+ +FP +YSQG+DISQDDVR S+P+  SDGR  SS SKRKRGSQR+ EL+ I++AL   N+QLR I EWP R  AN+  VR
Subjt:  IGSNEPAG-YEGFDMSDGNDIEFPFMYSQGIDISQDDVRTSQPACTSDGRIRSSESKRKRGSQREGELDVINMALKCMNDQLRTIIEWPTRPFANETFVR

Query:  QEFLRLLCEMPDLSSLDRELCQRQLMCSIDDMRSFVEMTDEERKNFCRVFLRDVSR
         EF R+L EMP+L+SLDR L QR L   +DD+R FV M ++ER+ FCRV LRD+ R
Subjt:  QEFLRLLCEMPDLSSLDRELCQRQLMCSIDDMRSFVEMTDEERKNFCRVFLRDVSR

TYJ96194.1 retrotransposon protein [Cucumis melo var. makuwa]6.87e-11065.62Show/hide
Query:  MAEKLPGCSVRATTLIVCTIKTLKRTFQAITEMREPACSGFKWNDEAKYIIVEKEVFDNWIRVRKLIKSLLNKLFSYYDELAYVFEWDRATGRFVETFAD
        MAEKLPGC VRATT+I C IKTLKRTFQAI EMR PACSGF WNDE K I+ EKE+FDNW+R     K LLNK F YYDEL YVF  DRATGRF ETFAD
Subjt:  MAEKLPGCSVRATTLIVCTIKTLKRTFQAITEMREPACSGFKWNDEAKYIIVEKEVFDNWIRVRKLIKSLLNKLFSYYDELAYVFEWDRATGRFVETFAD

Query:  IGSNEPAG-YEGFDMSDGNDIEFPFMYSQGIDISQDDVRTSQPACTSDGRIRSSESKRKRGSQREGELDVINMALKCMNDQLRTIIEWPTRPFANETFVR
        +GSNEP G Y+ FDM DGN+ +FP +YSQG+DISQDDVR S+P+  SDGR  SS SKRKRGSQR+ EL+ I++AL   N+QLR I +WP R  AN+  VR
Subjt:  IGSNEPAG-YEGFDMSDGNDIEFPFMYSQGIDISQDDVRTSQPACTSDGRIRSSESKRKRGSQREGELDVINMALKCMNDQLRTIIEWPTRPFANETFVR

Query:  QEFLRLLCEMPDLSSLDRELCQRQLMCSIDDMRSFVEMTDEERKNFCRVFLRDVSR
         EF R+L EMP+L+SLDR L QR L+  +DD+R FV M ++ER+ FCRV LRD+ R
Subjt:  QEFLRLLCEMPDLSSLDRELCQRQLMCSIDDMRSFVEMTDEERKNFCRVFLRDVSR

TYK10915.1 retrotransposon protein [Cucumis melo var. makuwa]1.77e-11065.62Show/hide
Query:  MAEKLPGCSVRATTLIVCTIKTLKRTFQAITEMREPACSGFKWNDEAKYIIVEKEVFDNWIRVRKLIKSLLNKLFSYYDELAYVFEWDRATGRFVETFAD
        MAEKLPGC VRATT+I C IKTLKRTFQAI EMR PACSGF WNDE K I+ EKE+FDNW+R     K LLNK F YYDEL YVF  DRATGRF ETFAD
Subjt:  MAEKLPGCSVRATTLIVCTIKTLKRTFQAITEMREPACSGFKWNDEAKYIIVEKEVFDNWIRVRKLIKSLLNKLFSYYDELAYVFEWDRATGRFVETFAD

Query:  IGSNEPAG-YEGFDMSDGNDIEFPFMYSQGIDISQDDVRTSQPACTSDGRIRSSESKRKRGSQREGELDVINMALKCMNDQLRTIIEWPTRPFANETFVR
        +GSNEP G Y+ FDM DGN+ +FP +YSQG+DISQDDVR S+P+  S+GR  SS SKRKRGSQR+ EL+ I++AL   N+QLR I EWP R  AN+  VR
Subjt:  IGSNEPAG-YEGFDMSDGNDIEFPFMYSQGIDISQDDVRTSQPACTSDGRIRSSESKRKRGSQREGELDVINMALKCMNDQLRTIIEWPTRPFANETFVR

Query:  QEFLRLLCEMPDLSSLDRELCQRQLMCSIDDMRSFVEMTDEERKNFCRVFLRDVSR
         EF R+L EMP+L+SLDR L QR L+  +DD+R FV M ++ER+ FCRV LRD+ R
Subjt:  QEFLRLLCEMPDLSSLDRELCQRQLMCSIDDMRSFVEMTDEERKNFCRVFLRDVSR

TrEMBL top hitse value%identityAlignment
A0A5A7TN44 Retrotransposon protein3.7e-8766.02Show/hide
Query:  MAEKLPGCSVRATTLIVCTIKTLKRTFQAITEMREPACSGFKWNDEAKYIIVEKEVFDNWIRVRKLIKSLLNKLFSYYDELAYVFEWDRATGRFVETFAD
        MAEKLPGC VRATT+I C IKTLKRTFQAI EMR PACSGF WNDE K I+ EKE+FDNW+R     K LLNK F YYDEL YVF  DRATGRF ETFAD
Subjt:  MAEKLPGCSVRATTLIVCTIKTLKRTFQAITEMREPACSGFKWNDEAKYIIVEKEVFDNWIRVRKLIKSLLNKLFSYYDELAYVFEWDRATGRFVETFAD

Query:  IGSNEP-AGYEGFDMSDGNDIEFPFMYSQGIDISQDDVRTSQPACTSDGRIRSSESKRKRGSQREGELDVINMALKCMNDQLRTIIEWPTRPFANETFVR
        +GSNEP  GY+ FDM DGN+ +FP +YSQG+DISQDDVR S+P+  SDGR  SS SKRKRGSQR+ EL+ I++AL   N+QLR I EWP R  AN+  VR
Subjt:  IGSNEP-AGYEGFDMSDGNDIEFPFMYSQGIDISQDDVRTSQPACTSDGRIRSSESKRKRGSQREGELDVINMALKCMNDQLRTIIEWPTRPFANETFVR

Query:  QEFLRLLCEMPDLSSLDRELCQRQLMCSIDDMRSFVEMTDEERKNFCRVFLRDVSR
         EF R+L EMP+L+SLDR L QR L   +DD+R FV M ++ER+ FCRV LRD+ R
Subjt:  QEFLRLLCEMPDLSSLDRELCQRQLMCSIDDMRSFVEMTDEERKNFCRVFLRDVSR

A0A5A7TRV1 Retrotransposon protein6.3e-8765.62Show/hide
Query:  MAEKLPGCSVRATTLIVCTIKTLKRTFQAITEMREPACSGFKWNDEAKYIIVEKEVFDNWIRVRKLIKSLLNKLFSYYDELAYVFEWDRATGRFVETFAD
        MAEKLPGC VRATT+I C IKTLKRTFQAI EMR PACSGF WNDE K I+ EKE+FDNW+R     K LLNK F YYDEL YVF  DRATGRF ETFAD
Subjt:  MAEKLPGCSVRATTLIVCTIKTLKRTFQAITEMREPACSGFKWNDEAKYIIVEKEVFDNWIRVRKLIKSLLNKLFSYYDELAYVFEWDRATGRFVETFAD

Query:  IGSNEP-AGYEGFDMSDGNDIEFPFMYSQGIDISQDDVRTSQPACTSDGRIRSSESKRKRGSQREGELDVINMALKCMNDQLRTIIEWPTRPFANETFVR
        +GSNEP  GY+ FDM DGN+ +FP +YSQG+DISQDDVR S+P+  S+GR  SS SKRKRGSQR+ EL+ I++AL   N+QLR I EWP R  AN+  VR
Subjt:  IGSNEP-AGYEGFDMSDGNDIEFPFMYSQGIDISQDDVRTSQPACTSDGRIRSSESKRKRGSQREGELDVINMALKCMNDQLRTIIEWPTRPFANETFVR

Query:  QEFLRLLCEMPDLSSLDRELCQRQLMCSIDDMRSFVEMTDEERKNFCRVFLRDVSR
         EF R+L EMP+L+SLDR L QR L+  +DD+R FV M ++ER+ FCRV LRD+ R
Subjt:  QEFLRLLCEMPDLSSLDRELCQRQLMCSIDDMRSFVEMTDEERKNFCRVFLRDVSR

A0A5D3BCN9 Retrotransposon protein4.8e-8765.62Show/hide
Query:  MAEKLPGCSVRATTLIVCTIKTLKRTFQAITEMREPACSGFKWNDEAKYIIVEKEVFDNWIRVRKLIKSLLNKLFSYYDELAYVFEWDRATGRFVETFAD
        MAEKLPGC VRATT+I C IKTLKRTFQAI EMR PACSGF WNDE K I+ EKE+FDNW+R     K LLNK F YYDEL YVF  DRATGRF ETFAD
Subjt:  MAEKLPGCSVRATTLIVCTIKTLKRTFQAITEMREPACSGFKWNDEAKYIIVEKEVFDNWIRVRKLIKSLLNKLFSYYDELAYVFEWDRATGRFVETFAD

Query:  IGSNEP-AGYEGFDMSDGNDIEFPFMYSQGIDISQDDVRTSQPACTSDGRIRSSESKRKRGSQREGELDVINMALKCMNDQLRTIIEWPTRPFANETFVR
        +GSNEP  GY+ FDM DGN+ +FP +YSQG+DISQDDVR S+P+  SDGR  SS SKRKRGSQR+ EL+ I++AL   N+QLR I +WP R  AN+  VR
Subjt:  IGSNEP-AGYEGFDMSDGNDIEFPFMYSQGIDISQDDVRTSQPACTSDGRIRSSESKRKRGSQREGELDVINMALKCMNDQLRTIIEWPTRPFANETFVR

Query:  QEFLRLLCEMPDLSSLDRELCQRQLMCSIDDMRSFVEMTDEERKNFCRVFLRDVSR
         EF R+L EMP+L+SLDR L QR L+  +DD+R FV M ++ER+ FCRV LRD+ R
Subjt:  QEFLRLLCEMPDLSSLDRELCQRQLMCSIDDMRSFVEMTDEERKNFCRVFLRDVSR

A0A5D3BQI7 Retrotransposon protein2.7e-13097.91Show/hide
Query:  VCTIKTLKRTFQAITEMREPACSGFKWNDEAKYIIVEKEVFDNWIRVRKLIKSLLNKLFSYYDELAYVFEWDRATGRFVETFADIGSNEPAGYEGFDMSD
        VCTIKTLKRTFQAITEMREPACSGFKWNDEAKYIIVEKEVFDNWIR     KSLLNKLFSYYDELAYVFEWDRATGRFVETFADIGSNEPAGYEGFDMSD
Subjt:  VCTIKTLKRTFQAITEMREPACSGFKWNDEAKYIIVEKEVFDNWIRVRKLIKSLLNKLFSYYDELAYVFEWDRATGRFVETFADIGSNEPAGYEGFDMSD

Query:  GNDIEFPFMYSQGIDISQDDVRTSQPACTSDGRIRSSESKRKRGSQREGELDVINMALKCMNDQLRTIIEWPTRPFANETFVRQEFLRLLCEMPDLSSLD
        GNDIEFPFMYSQGIDISQDDVRTSQPACTSDGRIRSSESKRKRGSQREGELDVINMALKCMNDQLRTIIEWPTRPFANETFVRQEFLRLLCEMPDLSSLD
Subjt:  GNDIEFPFMYSQGIDISQDDVRTSQPACTSDGRIRSSESKRKRGSQREGELDVINMALKCMNDQLRTIIEWPTRPFANETFVRQEFLRLLCEMPDLSSLD

Query:  RELCQRQLMCSIDDMRSFVEMTDEERKNFCRVFLRDVSR
        RELCQRQLMCSIDDMRSFVEMTDEERKNFCRVFLRDVSR
Subjt:  RELCQRQLMCSIDDMRSFVEMTDEERKNFCRVFLRDVSR

A0A5D3CWL2 Retrotransposon protein6.3e-8765.62Show/hide
Query:  MAEKLPGCSVRATTLIVCTIKTLKRTFQAITEMREPACSGFKWNDEAKYIIVEKEVFDNWIRVRKLIKSLLNKLFSYYDELAYVFEWDRATGRFVETFAD
        MAEKLPGC VRATT+I C IKTLKRTFQAI EMR PACSGF WNDE K I+ EKE+FDNW+R     K LLNK F YYDEL YVF  DRATGRF ETFAD
Subjt:  MAEKLPGCSVRATTLIVCTIKTLKRTFQAITEMREPACSGFKWNDEAKYIIVEKEVFDNWIRVRKLIKSLLNKLFSYYDELAYVFEWDRATGRFVETFAD

Query:  IGSNEP-AGYEGFDMSDGNDIEFPFMYSQGIDISQDDVRTSQPACTSDGRIRSSESKRKRGSQREGELDVINMALKCMNDQLRTIIEWPTRPFANETFVR
        +GSNEP  GY+ FDM DGN+ +FP +YSQG+DISQDDVR S+P+  SDGR  SS SKRKRGSQR+ EL+ I++AL   N+QLR I +WP R  AN+  VR
Subjt:  IGSNEP-AGYEGFDMSDGNDIEFPFMYSQGIDISQDDVRTSQPACTSDGRIRSSESKRKRGSQREGELDVINMALKCMNDQLRTIIEWPTRPFANETFVR

Query:  QEFLRLLCEMPDLSSLDRELCQRQLMCSIDDMRSFVEMTDEERKNFCRVFLRDVSR
         EF R+L EMP+L+SLDR L QR L+  +DD+R FV M ++ER+ FCRV LRD+ R
Subjt:  QEFLRLLCEMPDLSSLDRELCQRQLMCSIDDMRSFVEMTDEERKNFCRVFLRDVSR

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCAGAAAAGTTACCTGGATGTAGTGTTCGAGCCACCACTTTAATAGTCTGCACAATTAAGACACTTAAGCGGACCTTCCAAGCTATCACAGAAATGCGTGAGCCAGC
GTGCAGTGGGTTCAAATGGAACGATGAGGCAAAGTACATCATTGTCGAGAAGGAAGTGTTCGACAACTGGATTAGGGTAAGGAAACTAATCAAAAGCCTCCTTAACAAAC
TCTTTTCCTATTACGACGAACTTGCATATGTGTTCGAGTGGGATAGGGCGACGGGTCGCTTTGTAGAGACATTCGCCGACATTGGGTCTAATGAGCCTGCTGGGTATGAG
GGGTTTGACATGTCAGATGGAAACGATATAGAGTTTCCATTTATGTACAGCCAGGGGATTGACATATCCCAAGATGATGTACGCACATCACAACCTGCTTGCACGTCAGA
CGGTAGGATCAGATCGAGCGAATCCAAGCGAAAGAGGGGAAGCCAACGGGAGGGTGAGCTTGATGTGATAAATATGGCCTTGAAGTGTATGAATGACCAACTCAGGACCA
TTATCGAGTGGCCTACGCGCCCCTTTGCCAATGAGACCTTTGTTCGCCAGGAATTCTTACGCCTATTGTGTGAGATGCCCGACCTAAGCAGTTTGGATAGGGAGTTGTGC
CAAAGGCAGCTCATGTGTAGTATCGACGACATGCGTAGTTTCGTAGAGATGACTGACGAAGAGAGGAAGAACTTCTGTAGAGTCTTCTTACGAGATGTCTCGAGATAG
mRNA sequenceShow/hide mRNA sequence
ATGGCAGAAAAGTTACCTGGATGTAGTGTTCGAGCCACCACTTTAATAGTCTGCACAATTAAGACACTTAAGCGGACCTTCCAAGCTATCACAGAAATGCGTGAGCCAGC
GTGCAGTGGGTTCAAATGGAACGATGAGGCAAAGTACATCATTGTCGAGAAGGAAGTGTTCGACAACTGGATTAGGGTAAGGAAACTAATCAAAAGCCTCCTTAACAAAC
TCTTTTCCTATTACGACGAACTTGCATATGTGTTCGAGTGGGATAGGGCGACGGGTCGCTTTGTAGAGACATTCGCCGACATTGGGTCTAATGAGCCTGCTGGGTATGAG
GGGTTTGACATGTCAGATGGAAACGATATAGAGTTTCCATTTATGTACAGCCAGGGGATTGACATATCCCAAGATGATGTACGCACATCACAACCTGCTTGCACGTCAGA
CGGTAGGATCAGATCGAGCGAATCCAAGCGAAAGAGGGGAAGCCAACGGGAGGGTGAGCTTGATGTGATAAATATGGCCTTGAAGTGTATGAATGACCAACTCAGGACCA
TTATCGAGTGGCCTACGCGCCCCTTTGCCAATGAGACCTTTGTTCGCCAGGAATTCTTACGCCTATTGTGTGAGATGCCCGACCTAAGCAGTTTGGATAGGGAGTTGTGC
CAAAGGCAGCTCATGTGTAGTATCGACGACATGCGTAGTTTCGTAGAGATGACTGACGAAGAGAGGAAGAACTTCTGTAGAGTCTTCTTACGAGATGTCTCGAGATAG
Protein sequenceShow/hide protein sequence
MAEKLPGCSVRATTLIVCTIKTLKRTFQAITEMREPACSGFKWNDEAKYIIVEKEVFDNWIRVRKLIKSLLNKLFSYYDELAYVFEWDRATGRFVETFADIGSNEPAGYE
GFDMSDGNDIEFPFMYSQGIDISQDDVRTSQPACTSDGRIRSSESKRKRGSQREGELDVINMALKCMNDQLRTIIEWPTRPFANETFVRQEFLRLLCEMPDLSSLDRELC
QRQLMCSIDDMRSFVEMTDEERKNFCRVFLRDVSR