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IVF0002468 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0002468
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionChlorophyll a-b binding protein, chloroplastic
Genome locationchr12:19982973..19983760
RNA-Seq ExpressionIVF0002468
SyntenyIVF0002468
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6583907.1 hypothetical protein SDJN03_19839, partial [Cucurbita argyrosperma subsp. sororia]5.65e-12175.62Show/hide
Query:  MGEKMQPPPPPPPCLSLHSHFFSSLKQVEKRLKLDHSSQRDVLHPPPP-----VPVQTNASSSTEEDLLSTPMYLHFPQTNTSSTLQESSQPPLEFLSNY
        MGEKM PPPPPPP +SLHS FFSSLKQVEKRLKLDH SQRD L PP P     +PV+  +SSS EE L STPMYLH PQTNT+S+LQESS+PP EFLSN 
Subjt:  MGEKMQPPPPPPPCLSLHSHFFSSLKQVEKRLKLDHSSQRDVLHPPPP-----VPVQTNASSSTEEDLLSTPMYLHFPQTNTSSTLQESSQPPLEFLSNY

Query:  SHSPPSHPKSVSNPPNLIDRGQNRDLDDIQRLIQLLGLEDSCDEKELGTKIGCNGCEGCESGFYSKIVGLKGPKCRKEVERLNGWIEFFSNGGGEEDRLE
        S       KS SN PNLID G NR +DDIQRL+QLLGL DS +E+ELG + GCNGCEGCESGFYSKIVGLKGPKC KEVERLNGWI++  NGGGE +RLE
Subjt:  SHSPPSHPKSVSNPPNLIDRGQNRDLDDIQRLIQLLGLEDSCDEKELGTKIGCNGCEGCESGFYSKIVGLKGPKCRKEVERLNGWIEFFSNGGGEEDRLE

Query:  PLRLAYLLLGKAVFASNGDDGCLDGLEFPSTVEDFLLNDPPA
        PLRLAYLL+GKAVFASNG D CL+GLEFPSTVEDFLLNDPPA
Subjt:  PLRLAYLLLGKAVFASNGDDGCLDGLEFPSTVEDFLLNDPPA

KGN65550.1 hypothetical protein Csa_019856 [Cucumis sativus]9.21e-14990.91Show/hide
Query:  PPPPPPCLSLHSHFFSSLKQVEKRLKLDHSSQRDVLHPPPPVPVQTNASSSTEEDLLSTPMYLHFPQTNTSSTLQESSQPPLEFLSNYSHSPPSHPKSVS
        P P PPCLSLHS+FFSSLKQVEKRLKLDHSSQRDVLHPPPP+PV+TN SSSTEED LSTPMYLHFPQTNTSSTLQESSQ PLEFLS+ S SPPSHPKS S
Subjt:  PPPPPPCLSLHSHFFSSLKQVEKRLKLDHSSQRDVLHPPPPVPVQTNASSSTEEDLLSTPMYLHFPQTNTSSTLQESSQPPLEFLSNYSHSPPSHPKSVS

Query:  NPPNLIDRGQNRDLDDIQRLIQLLGLEDSCDEKELGTKIGCNGCEGCESGFYSKIVGLKGPKCRKEVERLNGWIEFFSNGGGEEDRLEPLRLAYLLLGKA
        NPP  IDRGQNRD+DDIQRLIQLLGLEDSCDEKE G K GCNGCEGCESGFYSKIVGLKGPKCRKEVERLNGWIEFFSNGG EEDRLEPLRLAYLLLGKA
Subjt:  NPPNLIDRGQNRDLDDIQRLIQLLGLEDSCDEKELGTKIGCNGCEGCESGFYSKIVGLKGPKCRKEVERLNGWIEFFSNGGGEEDRLEPLRLAYLLLGKA

Query:  VFASNGDDGCLDGLEFPSTVEDFLLNDPPAL
        VFASN DDGCL+GLEFPSTVEDFLLNDPPAL
Subjt:  VFASNGDDGCLDGLEFPSTVEDFLLNDPPAL

XP_004147438.2 uncharacterized protein LOC101217056 [Cucumis sativus]5.51e-15190.34Show/hide
Query:  MGEKMQPPPPPPPCLSLHSHFFSSLKQVEKRLKLDHSSQRDVLHPPPPVPVQTNASSSTEEDLLSTPMYLHFPQTNTSSTLQESSQPPLEFLSNYSHSPP
        MGEKM  P P PPCLSLHS+FFSSLKQVEKRLKLDHSSQRDVLHPPPP+PV+TN SSSTEED LSTPMYLHFPQTNTSSTLQESSQ PLEFLS+ S SPP
Subjt:  MGEKMQPPPPPPPCLSLHSHFFSSLKQVEKRLKLDHSSQRDVLHPPPPVPVQTNASSSTEEDLLSTPMYLHFPQTNTSSTLQESSQPPLEFLSNYSHSPP

Query:  SHPKSVSNPPNLIDRGQNRDLDDIQRLIQLLGLEDSCDEKELGTKIGCNGCEGCESGFYSKIVGLKGPKCRKEVERLNGWIEFFSNGGGEEDRLEPLRLA
        SHPKS SNPP  IDRGQNRD+DDIQRLIQLLGLEDSCDEKE G K GCNGCEGCESGFYSKIVGLKGPKCRKEVERLNGWIEFFSNGG EEDRLEPLRLA
Subjt:  SHPKSVSNPPNLIDRGQNRDLDDIQRLIQLLGLEDSCDEKELGTKIGCNGCEGCESGFYSKIVGLKGPKCRKEVERLNGWIEFFSNGGGEEDRLEPLRLA

Query:  YLLLGKAVFASNGDDGCLDGLEFPSTVEDFLLNDPPAL
        YLLLGKAVFASN DDGCL+GLEFPSTVEDFLLNDPPAL
Subjt:  YLLLGKAVFASNGDDGCLDGLEFPSTVEDFLLNDPPAL

XP_008444181.1 PREDICTED: uncharacterized protein LOC103487596 [Cucumis melo]8.66e-176100Show/hide
Query:  MGEKMQPPPPPPPCLSLHSHFFSSLKQVEKRLKLDHSSQRDVLHPPPPVPVQTNASSSTEEDLLSTPMYLHFPQTNTSSTLQESSQPPLEFLSNYSHSPP
        MGEKMQPPPPPPPCLSLHSHFFSSLKQVEKRLKLDHSSQRDVLHPPPPVPVQTNASSSTEEDLLSTPMYLHFPQTNTSSTLQESSQPPLEFLSNYSHSPP
Subjt:  MGEKMQPPPPPPPCLSLHSHFFSSLKQVEKRLKLDHSSQRDVLHPPPPVPVQTNASSSTEEDLLSTPMYLHFPQTNTSSTLQESSQPPLEFLSNYSHSPP

Query:  SHPKSVSNPPNLIDRGQNRDLDDIQRLIQLLGLEDSCDEKELGTKIGCNGCEGCESGFYSKIVGLKGPKCRKEVERLNGWIEFFSNGGGEEDRLEPLRLA
        SHPKSVSNPPNLIDRGQNRDLDDIQRLIQLLGLEDSCDEKELGTKIGCNGCEGCESGFYSKIVGLKGPKCRKEVERLNGWIEFFSNGGGEEDRLEPLRLA
Subjt:  SHPKSVSNPPNLIDRGQNRDLDDIQRLIQLLGLEDSCDEKELGTKIGCNGCEGCESGFYSKIVGLKGPKCRKEVERLNGWIEFFSNGGGEEDRLEPLRLA

Query:  YLLLGKAVFASNGDDGCLDGLEFPSTVEDFLLNDPPAL
        YLLLGKAVFASNGDDGCLDGLEFPSTVEDFLLNDPPAL
Subjt:  YLLLGKAVFASNGDDGCLDGLEFPSTVEDFLLNDPPAL

XP_038895328.1 uncharacterized protein LOC120083579 [Benincasa hispida]4.64e-14084.98Show/hide
Query:  MQPPPPPPPCLSLHSHFFSSLKQVEKRLKLDHSSQRDVLHPPPPVPVQTNASSSTEEDLLSTPMYLHFPQTNTSSTLQESSQPPLEFLSNYSHSPPSHPK
        MQPP PPPP +SLHS+FFSSLKQVEKRLKLDH SQRDVLHPPP  PV+TN+SSSTE D LSTPMYLHFPQTNT S LQESS+PPLEFLSN S SPPSHPK
Subjt:  MQPPPPPPPCLSLHSHFFSSLKQVEKRLKLDHSSQRDVLHPPPPVPVQTNASSSTEEDLLSTPMYLHFPQTNTSSTLQESSQPPLEFLSNYSHSPPSHPK

Query:  SVSNPPNLIDRGQNRDLDDIQRLIQLLGLEDSCDEKELGTKIGCNGCEGCESGFYSKIVGLKGPKCRKEVERLNGWIEFFSNGGGEEDRLEPLRLAYLLL
        S SNP   IDRGQN  + DIQRLIQLLGL +SCDE ELG K GCNGCEGCESGFYSKIVGLKGPKC+KEVERLNGWIEFFSNGGGEE+RLEPLRLAYLL 
Subjt:  SVSNPPNLIDRGQNRDLDDIQRLIQLLGLEDSCDEKELGTKIGCNGCEGCESGFYSKIVGLKGPKCRKEVERLNGWIEFFSNGGGEEDRLEPLRLAYLLL

Query:  GKAVFASNGDDGCLDGLEFPSTVEDFLLNDPPA
        GK+VFASNGDDGCL+G+EFPSTVEDFLLNDPPA
Subjt:  GKAVFASNGDDGCLDGLEFPSTVEDFLLNDPPA

TrEMBL top hitse value%identityAlignment
A0A0A0LUG6 Uncharacterized protein1.3e-11590.91Show/hide
Query:  PPPPPPCLSLHSHFFSSLKQVEKRLKLDHSSQRDVLHPPPPVPVQTNASSSTEEDLLSTPMYLHFPQTNTSSTLQESSQPPLEFLSNYSHSPPSHPKSVS
        P P PPCLSLHS+FFSSLKQVEKRLKLDHSSQRDVLHPPPP+PV+TN SSSTEED LSTPMYLHFPQTNTSSTLQESSQ PLEFLS+ S SPPSHPKS S
Subjt:  PPPPPPCLSLHSHFFSSLKQVEKRLKLDHSSQRDVLHPPPPVPVQTNASSSTEEDLLSTPMYLHFPQTNTSSTLQESSQPPLEFLSNYSHSPPSHPKSVS

Query:  NPPNLIDRGQNRDLDDIQRLIQLLGLEDSCDEKELGTKIGCNGCEGCESGFYSKIVGLKGPKCRKEVERLNGWIEFFSNGGGEEDRLEPLRLAYLLLGKA
        NPP  IDRGQNRD+DDIQRLIQLLGLEDSCDEKE G K GCNGCEGCESGFYSKIVGLKGPKCRKEVERLNGWIEFFSNGG EEDRLEPLRLAYLLLGKA
Subjt:  NPPNLIDRGQNRDLDDIQRLIQLLGLEDSCDEKELGTKIGCNGCEGCESGFYSKIVGLKGPKCRKEVERLNGWIEFFSNGGGEEDRLEPLRLAYLLLGKA

Query:  VFASNGDDGCLDGLEFPSTVEDFLLNDPPAL
        VFASN DDGCL+GLEFPSTVEDFLLNDPPAL
Subjt:  VFASNGDDGCLDGLEFPSTVEDFLLNDPPAL

A0A1S3B9V1 uncharacterized protein LOC1034875963.1e-136100Show/hide
Query:  MGEKMQPPPPPPPCLSLHSHFFSSLKQVEKRLKLDHSSQRDVLHPPPPVPVQTNASSSTEEDLLSTPMYLHFPQTNTSSTLQESSQPPLEFLSNYSHSPP
        MGEKMQPPPPPPPCLSLHSHFFSSLKQVEKRLKLDHSSQRDVLHPPPPVPVQTNASSSTEEDLLSTPMYLHFPQTNTSSTLQESSQPPLEFLSNYSHSPP
Subjt:  MGEKMQPPPPPPPCLSLHSHFFSSLKQVEKRLKLDHSSQRDVLHPPPPVPVQTNASSSTEEDLLSTPMYLHFPQTNTSSTLQESSQPPLEFLSNYSHSPP

Query:  SHPKSVSNPPNLIDRGQNRDLDDIQRLIQLLGLEDSCDEKELGTKIGCNGCEGCESGFYSKIVGLKGPKCRKEVERLNGWIEFFSNGGGEEDRLEPLRLA
        SHPKSVSNPPNLIDRGQNRDLDDIQRLIQLLGLEDSCDEKELGTKIGCNGCEGCESGFYSKIVGLKGPKCRKEVERLNGWIEFFSNGGGEEDRLEPLRLA
Subjt:  SHPKSVSNPPNLIDRGQNRDLDDIQRLIQLLGLEDSCDEKELGTKIGCNGCEGCESGFYSKIVGLKGPKCRKEVERLNGWIEFFSNGGGEEDRLEPLRLA

Query:  YLLLGKAVFASNGDDGCLDGLEFPSTVEDFLLNDPPAL
        YLLLGKAVFASNGDDGCLDGLEFPSTVEDFLLNDPPAL
Subjt:  YLLLGKAVFASNGDDGCLDGLEFPSTVEDFLLNDPPAL

A0A5A7UHE6 Uncharacterized protein3.1e-136100Show/hide
Query:  MGEKMQPPPPPPPCLSLHSHFFSSLKQVEKRLKLDHSSQRDVLHPPPPVPVQTNASSSTEEDLLSTPMYLHFPQTNTSSTLQESSQPPLEFLSNYSHSPP
        MGEKMQPPPPPPPCLSLHSHFFSSLKQVEKRLKLDHSSQRDVLHPPPPVPVQTNASSSTEEDLLSTPMYLHFPQTNTSSTLQESSQPPLEFLSNYSHSPP
Subjt:  MGEKMQPPPPPPPCLSLHSHFFSSLKQVEKRLKLDHSSQRDVLHPPPPVPVQTNASSSTEEDLLSTPMYLHFPQTNTSSTLQESSQPPLEFLSNYSHSPP

Query:  SHPKSVSNPPNLIDRGQNRDLDDIQRLIQLLGLEDSCDEKELGTKIGCNGCEGCESGFYSKIVGLKGPKCRKEVERLNGWIEFFSNGGGEEDRLEPLRLA
        SHPKSVSNPPNLIDRGQNRDLDDIQRLIQLLGLEDSCDEKELGTKIGCNGCEGCESGFYSKIVGLKGPKCRKEVERLNGWIEFFSNGGGEEDRLEPLRLA
Subjt:  SHPKSVSNPPNLIDRGQNRDLDDIQRLIQLLGLEDSCDEKELGTKIGCNGCEGCESGFYSKIVGLKGPKCRKEVERLNGWIEFFSNGGGEEDRLEPLRLA

Query:  YLLLGKAVFASNGDDGCLDGLEFPSTVEDFLLNDPPAL
        YLLLGKAVFASNGDDGCLDGLEFPSTVEDFLLNDPPAL
Subjt:  YLLLGKAVFASNGDDGCLDGLEFPSTVEDFLLNDPPAL

A0A6J1END4 uncharacterized protein LOC1114341553.8e-9475.31Show/hide
Query:  MGEKMQPPPPPP-PCLSLHSHFFSSLKQVEKRLKLDHSSQRDVLHPP-----PPVPVQTNASSSTEEDLLSTPMYLHFPQTNTSSTLQESSQPPLEFLSN
        MGEKM PPPPPP P +SLHS FFSSLKQVEKRLKLD+ SQRD L PP     P +PV+ ++SSS EE  LSTPMYLH PQTNT+S+LQESS+PP EFLSN
Subjt:  MGEKMQPPPPPP-PCLSLHSHFFSSLKQVEKRLKLDHSSQRDVLHPP-----PPVPVQTNASSSTEEDLLSTPMYLHFPQTNTSSTLQESSQPPLEFLSN

Query:  YSHSPPSHPKSVSNPPNLIDRGQNRDLDDIQRLIQLLGLEDSCDEKELGTKIGCNGCEGCESGFYSKIVGLKGPKCRKEVERLNGWIEFFSNGGGEEDRL
              S  KS SN PNLID GQNR +DDIQRL+QLLGL DS +E+ELG + GCNGCEGCESGFYSKIVGLKGPKC KEVERLNGWI +F  GGGE +RL
Subjt:  YSHSPPSHPKSVSNPPNLIDRGQNRDLDDIQRLIQLLGLEDSCDEKELGTKIGCNGCEGCESGFYSKIVGLKGPKCRKEVERLNGWIEFFSNGGGEEDRL

Query:  EPLRLAYLLLGKAVFASNGDDGCLDGLEFPSTVEDFLLNDPPA
        EPLRLAYLL+GKAVFASNG D CL+GLEFPSTVEDFLLNDPPA
Subjt:  EPLRLAYLLLGKAVFASNGDDGCLDGLEFPSTVEDFLLNDPPA

A0A6J1KGL6 uncharacterized protein LOC1114955901.4e-9374.9Show/hide
Query:  MGEKM-QPPPPPPPCLSLHSHFFSSLKQVEKRLKLDHSSQRDVLHPP-----PPVPVQTNASSSTEEDLLSTPMYLHFPQTNTSSTLQESSQPPLEFLSN
        MGEKM  PPPPPPP +SLHS FFSSLKQVEKRLKLD+ SQRD L PP     P +PV+ ++SSS EE  LSTPMYLH  QTNT+S+LQESS+PP EFLSN
Subjt:  MGEKM-QPPPPPPPCLSLHSHFFSSLKQVEKRLKLDHSSQRDVLHPP-----PPVPVQTNASSSTEEDLLSTPMYLHFPQTNTSSTLQESSQPPLEFLSN

Query:  YSHSPPSHPKSVSNPPNLIDRGQNRDLDDIQRLIQLLGLEDSCDEKELGTKIGCNGCEGCESGFYSKIVGLKGPKCRKEVERLNGWIEFFSNGGGEEDRL
              S  KS SN PNLID GQNR +DDIQRL+QLLG  DS +EKELG + GCNGCEGCESGFYSKIVGLKGPKC KEVERLNGWI++F  GGGE +RL
Subjt:  YSHSPPSHPKSVSNPPNLIDRGQNRDLDDIQRLIQLLGLEDSCDEKELGTKIGCNGCEGCESGFYSKIVGLKGPKCRKEVERLNGWIEFFSNGGGEEDRL

Query:  EPLRLAYLLLGKAVFASNGDDGCLDGLEFPSTVEDFLLNDPPA
        EPLRLAYLL+GKAVFASNG D CL+GLEFPSTVEDFLLNDPPA
Subjt:  EPLRLAYLLLGKAVFASNGDDGCLDGLEFPSTVEDFLLNDPPA

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGTGAAAAAATGCAGCCGCCACCGCCACCGCCACCGTGTTTATCTCTTCACTCCCATTTCTTTTCCTCTCTAAAGCAGGTCGAAAAGCGCCTCAAATTAGATCATTC
ATCGCAACGAGACGTTCTTCATCCACCACCTCCAGTGCCAGTACAAACCAATGCTTCTTCATCAACTGAAGAAGACTTACTGAGCACTCCCATGTACCTTCATTTCCCCC
AAACCAACACAAGCTCCACCTTACAAGAAAGCAGCCAACCGCCACTCGAATTCCTCTCAAATTACTCCCATTCTCCACCATCTCATCCGAAATCAGTATCGAATCCTCCA
AATCTCATCGATCGTGGCCAAAATCGAGATTTAGACGACATTCAACGGCTAATTCAACTCCTAGGGTTAGAAGATTCGTGTGACGAAAAGGAATTAGGAACTAAGATTGG
CTGTAATGGCTGTGAGGGATGTGAAAGCGGGTTTTACAGTAAGATCGTTGGCTTAAAAGGCCCCAAATGTAGAAAGGAGGTAGAGAGGCTAAATGGATGGATCGAGTTCT
TTAGTAATGGTGGTGGTGAAGAAGACAGATTAGAGCCTCTTAGATTAGCGTATTTGCTGTTGGGAAAAGCTGTTTTTGCTTCTAATGGCGATGATGGATGTTTGGACGGA
TTGGAATTCCCTTCAACTGTAGAGGATTTCTTGCTGAATGATCCTCCTGCATTATAG
mRNA sequenceShow/hide mRNA sequence
ATGGGTGAAAAAATGCAGCCGCCACCGCCACCGCCACCGTGTTTATCTCTTCACTCCCATTTCTTTTCCTCTCTAAAGCAGGTCGAAAAGCGCCTCAAATTAGATCATTC
ATCGCAACGAGACGTTCTTCATCCACCACCTCCAGTGCCAGTACAAACCAATGCTTCTTCATCAACTGAAGAAGACTTACTGAGCACTCCCATGTACCTTCATTTCCCCC
AAACCAACACAAGCTCCACCTTACAAGAAAGCAGCCAACCGCCACTCGAATTCCTCTCAAATTACTCCCATTCTCCACCATCTCATCCGAAATCAGTATCGAATCCTCCA
AATCTCATCGATCGTGGCCAAAATCGAGATTTAGACGACATTCAACGGCTAATTCAACTCCTAGGGTTAGAAGATTCGTGTGACGAAAAGGAATTAGGAACTAAGATTGG
CTGTAATGGCTGTGAGGGATGTGAAAGCGGGTTTTACAGTAAGATCGTTGGCTTAAAAGGCCCCAAATGTAGAAAGGAGGTAGAGAGGCTAAATGGATGGATCGAGTTCT
TTAGTAATGGTGGTGGTGAAGAAGACAGATTAGAGCCTCTTAGATTAGCGTATTTGCTGTTGGGAAAAGCTGTTTTTGCTTCTAATGGCGATGATGGATGTTTGGACGGA
TTGGAATTCCCTTCAACTGTAGAGGATTTCTTGCTGAATGATCCTCCTGCATTATAG
Protein sequenceShow/hide protein sequence
MGEKMQPPPPPPPCLSLHSHFFSSLKQVEKRLKLDHSSQRDVLHPPPPVPVQTNASSSTEEDLLSTPMYLHFPQTNTSSTLQESSQPPLEFLSNYSHSPPSHPKSVSNPP
NLIDRGQNRDLDDIQRLIQLLGLEDSCDEKELGTKIGCNGCEGCESGFYSKIVGLKGPKCRKEVERLNGWIEFFSNGGGEEDRLEPLRLAYLLLGKAVFASNGDDGCLDG
LEFPSTVEDFLLNDPPAL