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IVF0002523 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0002523
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionLEA_2 domain-containing protein
Genome locationchr12:12769999..12770646
RNA-Seq ExpressionIVF0002523
SyntenyIVF0002523
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR004864 - Late embryogenesis abundant protein, LEA_2 subgroup


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG2674349.1 hypothetical protein I3760_13G129800 [Carya illinoinensis]1.02e-4039.73Show/hide
Query:  PPPHPESQSHLHCFNSSP------------FLRGFAAGMAILLFIAFVIYSLQWLFFHPILPALRLDSLQLANFSSAAAAAP-SWIVGFSINNPNKKLAI
        PPPH   Q+H + +N+ P            F+R F A M  + F+  V   + WL   P LP  R+DSL L+NFSSA+++   +W V FS+ NPNKKL+I
Subjt:  PPPHPESQSHLHCFNSSP------------FLRGFAAGMAILLFIAFVIYSLQWLFFHPILPALRLDSLQLANFSSAAAAAP-SWIVGFSINNPNKKLAI

Query:  SFQNLDSSIYYKDNIIAQARIRRFLLRPRNSTTLVIPFIAV-SLVDESVLNDINGDLARGTINFTVVVLGYANFQISLWQWRGTNIQVVCSDLSVGFSWP
        S++ + +S++YK   I+  ++  F LR RN T L + F A  + V   V+NDINGD ARGT++F V+V  +  F+   W+ R  +I+V+C  L++G S  
Subjt:  SFQNLDSSIYYKDNIIAQARIRRFLLRPRNSTTLVIPFIAV-SLVDESVLNDINGDLARGTINFTVVVLGYANFQISLWQWRGTNIQVVCSDLSVGFSWP

Query:  PSLAGRSGQLVGGSKQCQL
         S +  SG LVGG + C++
Subjt:  PSLAGRSGQLVGGSKQCQL

KGN65002.2 hypothetical protein Csa_022841 [Cucumis sativus]3.27e-8364.02Show/hide
Query:  MANTTNSRWPPPHPESQSHLHCFNSSPFLRGFAAGMAILLFIAFVIYSLQWLFFHPILPALRLDSLQLANFSSAAAAAPSWIVGFSINNPNKKLAISFQN
        MAN+TN RWPPPHPE+Q+H HCFN SPF+RGFAAG+ +LLFI  +IY LQ+L F PIL ALRLDSLQ  NFS A AAAPSW                   
Subjt:  MANTTNSRWPPPHPESQSHLHCFNSSPFLRGFAAGMAILLFIAFVIYSLQWLFFHPILPALRLDSLQLANFSSAAAAAPSWIVGFSINNPNKKLAISFQN

Query:  LDSSIYYKDNIIAQARIRRFLLRPRNSTTLVIPFIAVSLVDESVLNDINGDLARGTINFTVVVLGYANFQISLWQWRGTNIQVVCSDLSVGFSWPPSLAG
                      AR RRFLL PRNSTTLV PFIA  LVDESVLNDI+GDL RGTI+FTVVVLGYAN +I +W+  GT+I+VVCSDLSV FSWPP L+G
Subjt:  LDSSIYYKDNIIAQARIRRFLLRPRNSTTLVIPFIAVSLVDESVLNDINGDLARGTINFTVVVLGYANFQISLWQWRGTNIQVVCSDLSVGFSWPPSLAG

Query:  RSGQLVGGSKQCQL
        RSGQLVGGS+QC L
Subjt:  RSGQLVGGSKQCQL

XP_008463664.1 PREDICTED: uncharacterized protein LOC103501757 [Cucumis melo]7.41e-15299.53Show/hide
Query:  MANTTNSRWPPPHPESQSHLHCFNSSPFLRGFAAGMAILLFIAFVIYSLQWLFFHPILPALRLDSLQLANFSSAAAAAPSWIVGFSINNPNKKLAISFQN
        MANTTNSRWPPPHPESQSHLHCFNSSPFLRGFAAGMA+LLFIAFVIYSLQWLFFHPILPALRLDSLQLANFSSAAAAAPSWIVGFSINNPNKKLAISFQN
Subjt:  MANTTNSRWPPPHPESQSHLHCFNSSPFLRGFAAGMAILLFIAFVIYSLQWLFFHPILPALRLDSLQLANFSSAAAAAPSWIVGFSINNPNKKLAISFQN

Query:  LDSSIYYKDNIIAQARIRRFLLRPRNSTTLVIPFIAVSLVDESVLNDINGDLARGTINFTVVVLGYANFQISLWQWRGTNIQVVCSDLSVGFSWPPSLAG
        LDSSIYYKDNIIAQARIRRFLLRPRNSTTLVIPFIAVSLVDESVLNDINGDLARGTINFTVVVLGYANFQISLWQWRGTNIQVVCSDLSVGFSWPPSLAG
Subjt:  LDSSIYYKDNIIAQARIRRFLLRPRNSTTLVIPFIAVSLVDESVLNDINGDLARGTINFTVVVLGYANFQISLWQWRGTNIQVVCSDLSVGFSWPPSLAG

Query:  RSGQLVGGSKQCQLQ
        RSGQLVGGSKQCQLQ
Subjt:  RSGQLVGGSKQCQLQ

XP_018857049.1 uncharacterized protein At1g08160-like [Juglans regia]3.61e-4141.71Show/hide
Query:  NSRWPPPHPESQSHLHCFNSSPFLRGFAAGMAILLFIAFVIYSLQWLFFHPILPALRLDSLQLANFSSAAAAAP-SWIVGFSINNPNKKLAISFQNLDSS
        N  +P P+P S S         F+R F A M ++ F+  V   + WL   P LP  R+DSL L+NFSSA+++   +W V FS+ NPNKKL+IS++ + SS
Subjt:  NSRWPPPHPESQSHLHCFNSSPFLRGFAAGMAILLFIAFVIYSLQWLFFHPILPALRLDSLQLANFSSAAAAAP-SWIVGFSINNPNKKLAISFQNLDSS

Query:  IYYKDNIIAQARIRRFLLRPRNSTTLVIPFIAV-SLVDESVLNDINGDLARGTINFTVVVLGYANFQISLWQWRGTNIQVVCSDLSVGFSWPPSLAGRSG
        ++YK   I+  R+  F L  RN T L + F A  + VD  V+NDINGD ARGT++F V+V  +  F+   W+ R  +I+V+C  L+VG S   S +  SG
Subjt:  IYYKDNIIAQARIRRFLLRPRNSTTLVIPFIAV-SLVDESVLNDINGDLARGTINFTVVVLGYANFQISLWQWRGTNIQVVCSDLSVGFSWPPSLAGRSG

Query:  QLVGGSKQCQL
         LVGG++ C++
Subjt:  QLVGGSKQCQL

XP_042956465.1 uncharacterized protein At1g08160 [Carya illinoinensis]7.19e-4140.18Show/hide
Query:  PPPHPESQSHLHCFNSSP------------FLRGFAAGMAILLFIAFVIYSLQWLFFHPILPALRLDSLQLANFSSAAAAAP-SWIVGFSINNPNKKLAI
        PPPH   Q+H + +N+ P            F+R F A M  + F+  V   + WL   P LP  R+DSL L+NFSSA+++   +W V FS+ NPNKKL+I
Subjt:  PPPHPESQSHLHCFNSSP------------FLRGFAAGMAILLFIAFVIYSLQWLFFHPILPALRLDSLQLANFSSAAAAAP-SWIVGFSINNPNKKLAI

Query:  SFQNLDSSIYYKDNIIAQARIRRFLLRPRNSTTLVIPFIAV-SLVDESVLNDINGDLARGTINFTVVVLGYANFQISLWQWRGTNIQVVCSDLSVGFSWP
        S++ + +S++YK   I+  ++  F LR RN T L + F A  + V   V+NDINGD ARGT++F V+V  +  F+   W+ R  +I+V+C  L+VG S  
Subjt:  SFQNLDSSIYYKDNIIAQARIRRFLLRPRNSTTLVIPFIAV-SLVDESVLNDINGDLARGTINFTVVVLGYANFQISLWQWRGTNIQVVCSDLSVGFSWP

Query:  PSLAGRSGQLVGGSKQCQL
         S +  SG LVGG + C++
Subjt:  PSLAGRSGQLVGGSKQCQL

TrEMBL top hitse value%identityAlignment
A0A0A0LT76 LEA_2 domain-containing protein8.1e-8878.04Show/hide
Query:  MANTTNSRWPPPHPESQSHLHCFNSSPFLRGFAAGMAILLFIAFVIYSLQWLFFHPILPALRLDSLQLANFSSAAAAAPSWIVGFSINNPNKKLAISFQN
        MAN+TN RWPPPHPE+Q+H HCFN SPF+RGFAAG+ +LLFI  +IY LQ+L F PIL ALRLDSLQ  NF SA AAAPSW+VGFSINNPNKKLAISF+N
Subjt:  MANTTNSRWPPPHPESQSHLHCFNSSPFLRGFAAGMAILLFIAFVIYSLQWLFFHPILPALRLDSLQLANFSSAAAAAPSWIVGFSINNPNKKLAISFQN

Query:  LDSSIYYKDNIIAQARIRRFLLRPRNSTTLVIPFIAVSLVDESVLNDINGDLARGTINFTVVVLGYANFQISLWQWRGTNIQVVCSDLSVGFSWPPSLAG
        L+SSIYYKDNIIAQAR RRFLL PRNSTTLV PFIA  LVDESVLNDI+GDL RGTI+FTVVVLGYAN +I +W+  GT+I+VVCSDLSV FSWPP L+G
Subjt:  LDSSIYYKDNIIAQARIRRFLLRPRNSTTLVIPFIAVSLVDESVLNDINGDLARGTINFTVVVLGYANFQISLWQWRGTNIQVVCSDLSVGFSWPPSLAG

Query:  RSGQLVGGSKQCQL
        RSGQLVGGS+QC L
Subjt:  RSGQLVGGSKQCQL

A0A1S3CJS5 uncharacterized protein LOC1035017573.7e-11799.53Show/hide
Query:  MANTTNSRWPPPHPESQSHLHCFNSSPFLRGFAAGMAILLFIAFVIYSLQWLFFHPILPALRLDSLQLANFSSAAAAAPSWIVGFSINNPNKKLAISFQN
        MANTTNSRWPPPHPESQSHLHCFNSSPFLRGFAAGMA+LLFIAFVIYSLQWLFFHPILPALRLDSLQLANFSSAAAAAPSWIVGFSINNPNKKLAISFQN
Subjt:  MANTTNSRWPPPHPESQSHLHCFNSSPFLRGFAAGMAILLFIAFVIYSLQWLFFHPILPALRLDSLQLANFSSAAAAAPSWIVGFSINNPNKKLAISFQN

Query:  LDSSIYYKDNIIAQARIRRFLLRPRNSTTLVIPFIAVSLVDESVLNDINGDLARGTINFTVVVLGYANFQISLWQWRGTNIQVVCSDLSVGFSWPPSLAG
        LDSSIYYKDNIIAQARIRRFLLRPRNSTTLVIPFIAVSLVDESVLNDINGDLARGTINFTVVVLGYANFQISLWQWRGTNIQVVCSDLSVGFSWPPSLAG
Subjt:  LDSSIYYKDNIIAQARIRRFLLRPRNSTTLVIPFIAVSLVDESVLNDINGDLARGTINFTVVVLGYANFQISLWQWRGTNIQVVCSDLSVGFSWPPSLAG

Query:  RSGQLVGGSKQCQLQ
        RSGQLVGGSKQCQLQ
Subjt:  RSGQLVGGSKQCQLQ

A0A2I4HLK5 uncharacterized protein At1g08160-like5.7e-3341.71Show/hide
Query:  NSRWPPPHPESQSHLHCFNSSPFLRGFAAGMAILLFIAFVIYSLQWLFFHPILPALRLDSLQLANFSSAAAA-APSWIVGFSINNPNKKLAISFQNLDSS
        N  +P P+P S       +S  F+R F A M ++ F+  V   + WL   P LP  R+DSL L+NFSSA+++   +W V FS+ NPNKKL+IS++ + SS
Subjt:  NSRWPPPHPESQSHLHCFNSSPFLRGFAAGMAILLFIAFVIYSLQWLFFHPILPALRLDSLQLANFSSAAAA-APSWIVGFSINNPNKKLAISFQNLDSS

Query:  IYYKDNIIAQARIRRFLLRPRNSTTLVIPFIAV-SLVDESVLNDINGDLARGTINFTVVVLGYANFQISLWQWRGTNIQVVCSDLSVGFSWPPSLAGRSG
        ++YK   I+  R+  F L  RN T L + F A  + VD  V+NDINGD ARGT++F V+V  +  F+   W+ R  +I+V+C  L+VG S   S +  SG
Subjt:  IYYKDNIIAQARIRRFLLRPRNSTTLVIPFIAV-SLVDESVLNDINGDLARGTINFTVVVLGYANFQISLWQWRGTNIQVVCSDLSVGFSWPPSLAGRSG

Query:  QLVGGSKQCQL
         LVGG++ C++
Subjt:  QLVGGSKQCQL

A0A5D3E5N0 Protein YLS9 isoform X23.7e-11799.53Show/hide
Query:  MANTTNSRWPPPHPESQSHLHCFNSSPFLRGFAAGMAILLFIAFVIYSLQWLFFHPILPALRLDSLQLANFSSAAAAAPSWIVGFSINNPNKKLAISFQN
        MANTTNSRWPPPHPESQSHLHCFNSSPFLRGFAAGMA+LLFIAFVIYSLQWLFFHPILPALRLDSLQLANFSSAAAAAPSWIVGFSINNPNKKLAISFQN
Subjt:  MANTTNSRWPPPHPESQSHLHCFNSSPFLRGFAAGMAILLFIAFVIYSLQWLFFHPILPALRLDSLQLANFSSAAAAAPSWIVGFSINNPNKKLAISFQN

Query:  LDSSIYYKDNIIAQARIRRFLLRPRNSTTLVIPFIAVSLVDESVLNDINGDLARGTINFTVVVLGYANFQISLWQWRGTNIQVVCSDLSVGFSWPPSLAG
        LDSSIYYKDNIIAQARIRRFLLRPRNSTTLVIPFIAVSLVDESVLNDINGDLARGTINFTVVVLGYANFQISLWQWRGTNIQVVCSDLSVGFSWPPSLAG
Subjt:  LDSSIYYKDNIIAQARIRRFLLRPRNSTTLVIPFIAVSLVDESVLNDINGDLARGTINFTVVVLGYANFQISLWQWRGTNIQVVCSDLSVGFSWPPSLAG

Query:  RSGQLVGGSKQCQLQ
        RSGQLVGGSKQCQLQ
Subjt:  RSGQLVGGSKQCQLQ

A0A6J1K154 NDR1/HIN1-like protein 27.3e-2835.85Show/hide
Query:  PPHPESQSHLHCFNSS------PFLRGFAAGMAILLFIAFVIYSLQWLFFHPILPALRLDSLQLANFSSAA-AAAPSWIVGFSINNPNKKLAISFQNLDS
        PP+     + + ++S+       FLR   AG+ ++  I  VI  + WL   P LP  R+DS Q+ NFS+A+ + + +W VGFS+ NPNKK++IS+  +DS
Subjt:  PPHPESQSHLHCFNSS------PFLRGFAAGMAILLFIAFVIYSLQWLFFHPILPALRLDSLQLANFSSAA-AAAPSWIVGFSINNPNKKLAISFQNLDS

Query:  SIYYKDNIIAQARIRRFLLRPRNSTTLVIPFIAV-SLVDESVLNDINGDLARGTINFTVVVLGYANFQISLWQWRGTNIQVVCSDLSVGFSWPPSLAGRS
        +++YK+ I+++ R+  F+   R  T +   F ++ + +D S +NDIN D  RG + F V +     F+   W+ R   ++V+C DLSVG S   S A  S
Subjt:  SIYYKDNIIAQARIRRFLLRPRNSTTLVIPFIAV-SLVDESVLNDINGDLARGTINFTVVVLGYANFQISLWQWRGTNIQVVCSDLSVGFSWPPSLAGRS

Query:  GQLVGGSKQCQL
        G+L+G S+ C++
Subjt:  GQLVGGSKQCQL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT4G01110.1 unknown protein3.2e-0421.54Show/hide
Query:  MAILLFIAFVIYSLQWLFFHPILPALRLDSLQLANFSSAAAAAPSWI--------VGFSINNPNKKLAISFQNLDSSIYYKDN----IIAQARIRRFLLR
        +AI++ +  +  S+ +L++ P LP +RL S +++NF+ +   A   +              NPN KL   + N+D ++   ++     +   +++ F+ +
Subjt:  MAILLFIAFVIYSLQWLFFHPILPALRLDSLQLANFSSAAAAAPSWI--------VGFSINNPNKKLAISFQNLDSSIYYKDN----IIAQARIRRFLLR

Query:  PRNSTTLVIPF-IAVSLVDESVLNDINGDL
        P N T +++P  +    VD+  +  +  D+
Subjt:  PRNSTTLVIPF-IAVSLVDESVLNDINGDL

AT4G05220.1 Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family2.6e-0624.29Show/hide
Query:  ILLFIAFVIYSLQWLFFHPILPALRLDSLQLANFSSAAAAAPSWIV-GFSINNPNKKLAISFQNLDSSIYYKDNIIAQ-ARIRRFLLRPRNSTTLVIPFI
        ++LF   VI  + WL   P  P   +    +           + I    +I NPN+ + + F +++ SIYYKD  +     +  F  +P N+T +     
Subjt:  ILLFIAFVIYSLQWLFFHPILPALRLDSLQLANFSSAAAAAPSWIV-GFSINNPNKKLAISFQNLDSSIYYKDNIIAQ-ARIRRFLLRPRNSTTLVIPFI

Query:  AVSL-VDESVLNDINGDLARGTINFTVVVLGYANFQISLW
          SL V+ +   + + D A+GT+ F + ++    F++  W
Subjt:  AVSL-VDESVLNDINGDLARGTINFTVVVLGYANFQISLW


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTAACACCACCAACAGCAGATGGCCGCCGCCTCATCCTGAATCCCAATCTCATCTTCATTGCTTCAATTCCTCACCCTTCCTCCGAGGCTTCGCCGCCGGCATGGC
TATCCTTCTTTTCATCGCTTTTGTCATCTATTCTCTCCAATGGTTATTCTTCCACCCCATCCTCCCCGCCCTCCGACTCGACTCACTTCAACTCGCTAATTTCTCCTCCG
CCGCCGCCGCCGCTCCCTCATGGATCGTCGGATTTTCCATCAACAATCCTAACAAGAAGCTCGCTATCTCATTCCAAAACCTTGACTCCTCCATTTACTACAAAGACAAT
ATTATTGCTCAGGCTCGAATTCGTCGCTTCCTCCTCCGCCCAAGGAATTCCACCACCCTCGTCATCCCCTTCATTGCTGTCTCGCTTGTGGACGAGTCGGTTCTGAACGA
CATTAATGGAGACTTGGCGCGTGGAACAATTAATTTCACCGTCGTAGTTCTTGGCTATGCCAACTTCCAGATCAGCCTGTGGCAGTGGAGGGGTACCAATATTCAGGTTG
TTTGCAGTGATTTGTCAGTTGGATTCTCGTGGCCGCCTAGTCTCGCTGGCCGGTCCGGCCAGTTGGTTGGTGGTTCAAAGCAATGCCAGCTACAATGA
mRNA sequenceShow/hide mRNA sequence
ATGGCTAACACCACCAACAGCAGATGGCCGCCGCCTCATCCTGAATCCCAATCTCATCTTCATTGCTTCAATTCCTCACCCTTCCTCCGAGGCTTCGCCGCCGGCATGGC
TATCCTTCTTTTCATCGCTTTTGTCATCTATTCTCTCCAATGGTTATTCTTCCACCCCATCCTCCCCGCCCTCCGACTCGACTCACTTCAACTCGCTAATTTCTCCTCCG
CCGCCGCCGCCGCTCCCTCATGGATCGTCGGATTTTCCATCAACAATCCTAACAAGAAGCTCGCTATCTCATTCCAAAACCTTGACTCCTCCATTTACTACAAAGACAAT
ATTATTGCTCAGGCTCGAATTCGTCGCTTCCTCCTCCGCCCAAGGAATTCCACCACCCTCGTCATCCCCTTCATTGCTGTCTCGCTTGTGGACGAGTCGGTTCTGAACGA
CATTAATGGAGACTTGGCGCGTGGAACAATTAATTTCACCGTCGTAGTTCTTGGCTATGCCAACTTCCAGATCAGCCTGTGGCAGTGGAGGGGTACCAATATTCAGGTTG
TTTGCAGTGATTTGTCAGTTGGATTCTCGTGGCCGCCTAGTCTCGCTGGCCGGTCCGGCCAGTTGGTTGGTGGTTCAAAGCAATGCCAGCTACAATGA
Protein sequenceShow/hide protein sequence
MANTTNSRWPPPHPESQSHLHCFNSSPFLRGFAAGMAILLFIAFVIYSLQWLFFHPILPALRLDSLQLANFSSAAAAAPSWIVGFSINNPNKKLAISFQNLDSSIYYKDN
IIAQARIRRFLLRPRNSTTLVIPFIAVSLVDESVLNDINGDLARGTINFTVVVLGYANFQISLWQWRGTNIQVVCSDLSVGFSWPPSLAGRSGQLVGGSKQCQLQ