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IVF0002551 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0002551
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionRetrotrans_gag domain-containing protein
Genome locationchr11:20346566..20346733
RNA-Seq ExpressionIVF0002551
SyntenyIVF0002551
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0045021.1 hypothetical protein E6C27_scaffold30G00060 [Cucumis melo var. makuwa]2.76e-0955.36Show/hide
Query:  MFTGG-ILRSPYNQIKSMLDDMANNNEEWRDDGFGSRQENQGTIRDRDRIEDGADR
        MF GG +LRS YN+I+  LD M NN++EW+DDGFGS+QE++    ++DR +DG DR
Subjt:  MFTGG-ILRSPYNQIKSMLDDMANNNEEWRDDGFGSRQENQGTIRDRDRIEDGADR

KAA0048713.1 hypothetical protein E6C27_scaffold43G00050 [Cucumis melo var. makuwa]1.22e-1364.81Show/hide
Query:  MFTGGILRSPYNQIKSMLDDMANNNEEWRDDGFGSRQENQGTIRDRDRIEDGAD
        +FTGG+LRS YNQIK+MLD MA+N++EWRD+ FGSR +++GT  +R RIEDG D
Subjt:  MFTGGILRSPYNQIKSMLDDMANNNEEWRDDGFGSRQENQGTIRDRDRIEDGAD

KAA0051814.1 hypothetical protein E6C27_scaffold60G002290 [Cucumis melo var. makuwa]3.45e-1162.96Show/hide
Query:  MFTGGILRSPYNQIKSMLDDMANNNEEWRDDGFGSRQENQGTI-RDRDRIEDGA
        +F G +LRS YNQ  + LD MA+N++EWRDDGFGS QE++GT  R+RDRI+DGA
Subjt:  MFTGGILRSPYNQIKSMLDDMANNNEEWRDDGFGSRQENQGTI-RDRDRIEDGA

KGN44484.1 hypothetical protein Csa_015918 [Cucumis sativus]2.01e-0766.67Show/hide
Query:  MFTGGILRSPYNQIKSMLDDMANNNEEWRDDGFGSR
        +F GG+LRS YNQIK+ LD M+NN++EW D GFGSR
Subjt:  MFTGGILRSPYNQIKSMLDDMANNNEEWRDDGFGSR

KGN57762.1 hypothetical protein Csa_009532 [Cucumis sativus]2.18e-0953.7Show/hide
Query:  MFTGGILRSPYNQIKSMLDDMANNNEEWRDDGFGSRQENQGTIRDRDRIEDGAD
        +FTGG+L S YN IK+ L+ M +N++EWRDD FGSR E+ G+ R R RI++G++
Subjt:  MFTGGILRSPYNQIKSMLDDMANNNEEWRDDGFGSRQENQGTIRDRDRIEDGAD

TrEMBL top hitse value%identityAlignment
A0A0A0LAQ9 Uncharacterized protein1.2e-0653.7Show/hide
Query:  MFTGGILRSPYNQIKSMLDDMANNNEEWRDDGFGSRQENQGTIRDRDRIEDGAD
        +FTGG+L S YN IK+ L+ M +N++EWRDD FGSR E+ G+ R R RI++G++
Subjt:  MFTGGILRSPYNQIKSMLDDMANNNEEWRDDGFGSRQENQGTIRDRDRIEDGAD

A0A5A7U900 Uncharacterized protein4.8e-0860.71Show/hide
Query:  MFTGGILRSPYNQIKSMLDDMANNNEEWRDDGFGSRQENQGT-IRDRDRIEDGADR
        +F G +LRS YNQ  + LD MA+N++EWRDDGFGS QE++GT  R+RDRI+DGA +
Subjt:  MFTGGILRSPYNQIKSMLDDMANNNEEWRDDGFGSRQENQGT-IRDRDRIEDGADR

A0A5A7UYP0 Retrotrans_gag domain-containing protein1.1e-0468.57Show/hide
Query:  MFTGGILRSPYNQIKSMLDDMANNNEEWRDDGFGS
        +F GGILRS Y+QIK+ +D MANN++EW DDGFGS
Subjt:  MFTGGILRSPYNQIKSMLDDMANNNEEWRDDGFGS

A0A5D3CC26 Uncharacterized protein1.0e-1064.81Show/hide
Query:  MFTGGILRSPYNQIKSMLDDMANNNEEWRDDGFGSRQENQGTIRDRDRIEDGAD
        +FTGG+LRS YNQIK+MLD MA+N++EWRD+ FGSR +++GT  +R RIEDG D
Subjt:  MFTGGILRSPYNQIKSMLDDMANNNEEWRDDGFGSRQENQGTIRDRDRIEDGAD

A0A5D3CV99 Uncharacterized protein2.6e-0655.36Show/hide
Query:  MFTGG-ILRSPYNQIKSMLDDMANNNEEWRDDGFGSRQENQGTIRDRDRIEDGADR
        MF GG +LRS YN+I+  LD M NN++EW+DDGFGS+QE++    ++DR +DG DR
Subjt:  MFTGG-ILRSPYNQIKSMLDDMANNNEEWRDDGFGSRQENQGTIRDRDRIEDGADR

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTTACTGGAGGGATATTAAGATCACCCTACAACCAGATCAAAAGTATGCTGGACGATATGGCCAACAACAACGAAGAATGGAGAGATGATGGCTTCGGCTCACGACA
AGAAAATCAAGGGACCATAAGAGATAGAGATAGGATAGAGGATGGAGCGGATAGATAA
mRNA sequenceShow/hide mRNA sequence
ATGTTTACTGGAGGGATATTAAGATCACCCTACAACCAGATCAAAAGTATGCTGGACGATATGGCCAACAACAACGAAGAATGGAGAGATGATGGCTTCGGCTCACGACA
AGAAAATCAAGGGACCATAAGAGATAGAGATAGGATAGAGGATGGAGCGGATAGATAA
Protein sequenceShow/hide protein sequence
MFTGGILRSPYNQIKSMLDDMANNNEEWRDDGFGSRQENQGTIRDRDRIEDGADR