; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

IVF0002595 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0002595
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionPMD domain-containing protein
Genome locationchr09:17089710..17090020
RNA-Seq ExpressionIVF0002595
SyntenyIVF0002595
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0025356.1 hypothetical protein E6C27_scaffold1204G00400 [Cucumis melo var. makuwa]1.58e-1748.67Show/hide
Query:  MVYFTERFLSRVRHLVVLSNRNQPREDGFN-------------HWPRLDNNSILPRLSMEIKGVNGLS-WIGLGDILNPTHILGL----------VGLPT
        MVYFTERFLS VRHLV+LS+RNQPREDG +             HWPRL+NNSILPRL MEI    G S WI    I N  H  G           VG  T
Subjt:  MVYFTERFLSRVRHLVVLSNRNQPREDGFN-------------HWPRLDNNSILPRLSMEIKGVNGLS-WIGLGDILNPTHILGL----------VGLPT

Query:  QIKFPTQPVKYGL
        ++ + T+   YG+
Subjt:  QIKFPTQPVKYGL

KAA0048380.1 putative mitochondrial protein [Cucumis melo var. makuwa]1.44e-1858.97Show/hide
Query:  MVYFTERFLSRVRHLVVLSNRNQPREDGFN-------------HWPRLDNNSILPRLSMEIKGVNGLS-WIGLGDILN
        MVYFTERFLS VRHLV+LS+RNQPREDG +             HWPRLDNNS+LPRLS+EI    G S W+    I N
Subjt:  MVYFTERFLSRVRHLVVLSNRNQPREDGFN-------------HWPRLDNNSILPRLSMEIKGVNGLS-WIGLGDILN

KAA0057574.1 putative mitochondrial protein [Cucumis melo var. makuwa]1.46e-1857.69Show/hide
Query:  MVYFTERFLSRVRHLVVLSNRNQPREDGFN-------------HWPRLDNNSILPRLSMEIKGVNGLS-WIGLGDILN
        MVYFTERFLS VRHLV+LS+RNQPREDG +             HWPRLDNNS+LPRLS+E+    G S W+    I N
Subjt:  MVYFTERFLSRVRHLVVLSNRNQPREDGFN-------------HWPRLDNNSILPRLSMEIKGVNGLS-WIGLGDILN

TYJ98141.1 putative mitochondrial protein [Cucumis melo var. makuwa]3.30e-5486.14Show/hide
Query:  MVYFTERFLSRVRHLVVLSNRNQPREDGFN-------------HWPRLDNNSILPRLSMEIKGVNGLSWIGLGDILNPTHILGLVGLPTQIKFPTQPVKY
        MVYFTERFLSRVRHLVVLSNRNQPREDGF+             HWPRLDNNSILPRLSMEIKGVNGLSWIGLGDILNPTHILGLVGLPTQIKFPTQPVKY
Subjt:  MVYFTERFLSRVRHLVVLSNRNQPREDGFN-------------HWPRLDNNSILPRLSMEIKGVNGLSWIGLGDILNPTHILGLVGLPTQIKFPTQPVKY

Query:  G
        G
Subjt:  G

TYK20969.1 hypothetical protein E5676_scaffold18270G00010 [Cucumis melo var. makuwa]2.03e-1761.97Show/hide
Query:  MVYFTERFLSRVRHLVVLSNRNQPREDGF-------------NHWPRLDNNSILPRLSMEIKGVNGLS-WI
        MVYFTERFLS VRHLV+LS+RNQPREDG              NHWPRLDNNS+LPRLS+E+    G S W+
Subjt:  MVYFTERFLSRVRHLVVLSNRNQPREDGF-------------NHWPRLDNNSILPRLSMEIKGVNGLS-WI

TrEMBL top hitse value%identityAlignment
A0A5A7SHN8 PMD domain-containing protein7.3e-1458.33Show/hide
Query:  MVYFTERFLSRVRHLVVLSNRNQPREDGF-------------NHWPRLDNNSILPRLSMEIKGVNGLS-WIGLGDILNPTHILG
        MVYFTERFLS VRHLV+LS+RNQPREDG              +HWPRL+NNSILPRL MEI    G S WI    I N  H  G
Subjt:  MVYFTERFLSRVRHLVVLSNRNQPREDGF-------------NHWPRLDNNSILPRLSMEIKGVNGLS-WIGLGDILNPTHILG

A0A5A7TZ08 Putative mitochondrial protein9.5e-1458.97Show/hide
Query:  MVYFTERFLSRVRHLVVLSNRNQPREDGF-------------NHWPRLDNNSILPRLSMEIKGVNGLS-WIGLGDILN
        MVYFTERFLS VRHLV+LS+RNQPREDG              +HWPRLDNNS+LPRLS+EI    G S W+    I N
Subjt:  MVYFTERFLSRVRHLVVLSNRNQPREDGF-------------NHWPRLDNNSILPRLSMEIKGVNGLS-WIGLGDILN

A0A5A7U8X8 PMD domain-containing protein7.3e-1461.97Show/hide
Query:  MVYFTERFLSRVRHLVVLSNRNQPREDGF-------------NHWPRLDNNSILPRLSMEIKGVNGLS-WI
        MVYFTERFLS VRHLV+LS+RNQPREDG              NHWPRLDNNS+LPRLS+E+    G S W+
Subjt:  MVYFTERFLSRVRHLVVLSNRNQPREDGF-------------NHWPRLDNNSILPRLSMEIKGVNGLS-WI

A0A5D3BHL2 Putative mitochondrial protein4.1e-4186.14Show/hide
Query:  MVYFTERFLSRVRHLVVLSNRNQPREDGF-------------NHWPRLDNNSILPRLSMEIKGVNGLSWIGLGDILNPTHILGLVGLPTQIKFPTQPVKY
        MVYFTERFLSRVRHLVVLSNRNQPREDGF             +HWPRLDNNSILPRLSMEIKGVNGLSWIGLGDILNPTHILGLVGLPTQIKFPTQPVKY
Subjt:  MVYFTERFLSRVRHLVVLSNRNQPREDGF-------------NHWPRLDNNSILPRLSMEIKGVNGLSWIGLGDILNPTHILGLVGLPTQIKFPTQPVKY

Query:  G
        G
Subjt:  G

A0A5D3DCE5 PMD domain-containing protein7.3e-1461.97Show/hide
Query:  MVYFTERFLSRVRHLVVLSNRNQPREDGF-------------NHWPRLDNNSILPRLSMEIKGVNGLS-WI
        MVYFTERFLS VRHLV+LS+RNQPREDG              NHWPRLDNNS+LPRLS+E+    G S W+
Subjt:  MVYFTERFLSRVRHLVVLSNRNQPREDGF-------------NHWPRLDNNSILPRLSMEIKGVNGLS-WI

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTTTACTTCACAGAACGATTCTTGTCCAGAGTCCGACACCTCGTAGTACTTTCTAATAGAAATCAACCAAGAGAAGATGGATTTAATCATTGGCCACGCTTAGACAA
CAACTCGATTCTTCCCAGATTATCTATGGAGATTAAGGGTGTAAACGGTTTGAGTTGGATTGGGTTAGGAGACATTCTCAATCCAACTCATATTCTCGGGTTGGTTGGGT
TGCCAACCCAAATTAAGTTTCCAACCCAACCTGTAAAATATGGGTTAGGTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGTTTACTTCACAGAACGATTCTTGTCCAGAGTCCGACACCTCGTAGTACTTTCTAATAGAAATCAACCAAGAGAAGATGGATTTAATCATTGGCCACGCTTAGACAA
CAACTCGATTCTTCCCAGATTATCTATGGAGATTAAGGGTGTAAACGGTTTGAGTTGGATTGGGTTAGGAGACATTCTCAATCCAACTCATATTCTCGGGTTGGTTGGGT
TGCCAACCCAAATTAAGTTTCCAACCCAACCTGTAAAATATGGGTTAGGTTGA
Protein sequenceShow/hide protein sequence
MVYFTERFLSRVRHLVVLSNRNQPREDGFNHWPRLDNNSILPRLSMEIKGVNGLSWIGLGDILNPTHILGLVGLPTQIKFPTQPVKYGLG