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IVF0002597 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0002597
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionGag/pol protein
Genome locationchr10:23314546..23314785
RNA-Seq ExpressionIVF0002597
SyntenyIVF0002597
Gene Ontology termsGO:0090304 - nucleic acid metabolic process (biological process)
GO:0110165 - cellular anatomical structure (cellular component)
GO:0016787 - hydrolase activity (molecular function)
GO:0046872 - metal ion binding (molecular function)
GO:0140640 - catalytic activity, acting on a nucleic acid (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0047411.1 gag/pol protein [Cucumis melo var. makuwa]1.64e-1654.43Show/hide
Query:  MRARMPRTQFSRLGVKSGPSTISSLCSISIISLSIIWAHTLRTSTYSSGMLPDTFSQDMSREVSLLEGELRCDPKRSKR
        MRARMP TQF   GVK+ P+T+S  C + +I  S    HT RTS Y  G++P  F Q + R+ S LEGELRC PKRSKR
Subjt:  MRARMPRTQFSRLGVKSGPSTISSLCSISIISLSIIWAHTLRTSTYSSGMLPDTFSQDMSREVSLLEGELRCDPKRSKR

KAA0059489.1 ribosomal protein L5 [Cucumis melo var. makuwa]2.33e-1760Show/hide
Query:  MPRTQFSRLGVKSGPSTISSLCSISIISLSIIWAHTLRTSTYSSGMLPDTFSQDMSREVSLLEGELRCDPKRSKR
        MPRTQFS   VKSG  T+SSLCS+ +ISLSI  A    TS ++ GML  TFSQ + RE S LEG+L C+PK SKR
Subjt:  MPRTQFSRLGVKSGPSTISSLCSISIISLSIIWAHTLRTSTYSSGMLPDTFSQDMSREVSLLEGELRCDPKRSKR

KAA0062888.1 non-LTR retroelement reverse transcriptase-like protein [Cucumis melo var. makuwa]1.08e-2062.82Show/hide
Query:  RARMPRTQFSRLGVKSGPSTISSLCSISIISLSIIWAHTLRTSTYSSGMLPDTFSQDMSREVSLLEGELRCDPKRSKR
        RARMPR+QFSR G KS   T+SSLC + +I+LSI  A T RTST+++GMLPD FS+ + +E S LEGEL C+PKRSKR
Subjt:  RARMPRTQFSRLGVKSGPSTISSLCSISIISLSIIWAHTLRTSTYSSGMLPDTFSQDMSREVSLLEGELRCDPKRSKR

KAA0065520.1 retrotransposon protein, putative, Ty3-gypsy subclass, expressed [Cucumis melo var. makuwa]1.09e-1552.56Show/hide
Query:  MRARMPRTQFSRLGVKSGPSTISSLCSISIISLSIIWAHTLRTSTYSSGMLPDTFSQDMSREVSLLEGELRCDPKRSK
        +R RMP TQF  LGVK+GP+ +S  C + +IS S    HTLRTS Y  G++  +FSQ + RE S  +GE RC+PKRSK
Subjt:  MRARMPRTQFSRLGVKSGPSTISSLCSISIISLSIIWAHTLRTSTYSSGMLPDTFSQDMSREVSLLEGELRCDPKRSK

TYK15439.1 uncharacterized protein E5676_scaffold477G00010 [Cucumis melo var. makuwa]7.75e-1661.54Show/hide
Query:  VKSGPSTISSLCSISIISLSIIWAHTLRTSTYSSGMLPDTFSQDMSREVSLLEGELRCDPKRSKR
        VKSGP T+SS+CS+ +I LSI  A   RTST++ GMLPD FS  + RE   LEGEL CDPKRS+R
Subjt:  VKSGPSTISSLCSISIISLSIIWAHTLRTSTYSSGMLPDTFSQDMSREVSLLEGELRCDPKRSKR

TrEMBL top hitse value%identityAlignment
A0A5A7V129 Ribosomal protein L5 (Mitochondrion)2.7e-1260Show/hide
Query:  MPRTQFSRLGVKSGPSTISSLCSISIISLSIIWAHTLRTSTYSSGMLPDTFSQDMSREVSLLEGELRCDPKRSKR
        MPRTQFS   VKSG  T+SSLCS+ +ISLSI  A    TS ++ GML  TFSQ + RE S LEG+L C+PK SKR
Subjt:  MPRTQFSRLGVKSGPSTISSLCSISIISLSIIWAHTLRTSTYSSGMLPDTFSQDMSREVSLLEGELRCDPKRSKR

A0A5A7V5J2 Non-LTR retroelement reverse transcriptase-like protein3.1e-1662.82Show/hide
Query:  RARMPRTQFSRLGVKSGPSTISSLCSISIISLSIIWAHTLRTSTYSSGMLPDTFSQDMSREVSLLEGELRCDPKRSKR
        RARMPR+QFSR G KS   T+SSLC + +I+LSI  A T RTST+++GMLPD FS+ + +E S LEGEL C+PKRSKR
Subjt:  RARMPRTQFSRLGVKSGPSTISSLCSISIISLSIIWAHTLRTSTYSSGMLPDTFSQDMSREVSLLEGELRCDPKRSKR

A0A5A7VEB1 Retrotransposon protein, putative, Ty3-gypsy subclass, expressed6.0e-1252.56Show/hide
Query:  MRARMPRTQFSRLGVKSGPSTISSLCSISIISLSIIWAHTLRTSTYSSGMLPDTFSQDMSREVSLLEGELRCDPKRSK
        +R RMP TQF  LGVK+GP+ +S  C + +IS S    HTLRTS Y  G++  +FSQ + RE S  +GE RC+PKRSK
Subjt:  MRARMPRTQFSRLGVKSGPSTISSLCSISIISLSIIWAHTLRTSTYSSGMLPDTFSQDMSREVSLLEGELRCDPKRSK

A0A5D3CUK8 Gag/pol protein1.2e-1254.43Show/hide
Query:  MRARMPRTQFSRLGVKSGPSTISSLCSISIISLSIIWAHTLRTSTYSSGMLPDTFSQDMSREVSLLEGELRCDPKRSKR
        MRARMP TQF   GVK+ P+T+S  C + +I  S    HT RTS Y  G++P  F Q + R+ S LEGELRC PKRSKR
Subjt:  MRARMPRTQFSRLGVKSGPSTISSLCSISIISLSIIWAHTLRTSTYSSGMLPDTFSQDMSREVSLLEGELRCDPKRSKR

A0A5D3CZ27 ULP_PROTEASE domain-containing protein3.0e-1161.54Show/hide
Query:  VKSGPSTISSLCSISIISLSIIWAHTLRTSTYSSGMLPDTFSQDMSREVSLLEGELRCDPKRSKR
        VKSGP T+SS+CS+ +I LSI  A   RTST++ GMLPD FS  + RE   LEGEL CDPKRS+R
Subjt:  VKSGPSTISSLCSISIISLSIIWAHTLRTSTYSSGMLPDTFSQDMSREVSLLEGELRCDPKRSKR

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCGAGCGAGAATGCCTCGGACTCAGTTTTCTCGTCTTGGGGTGAAAAGCGGTCCCTCGACGATTTCTTCTCTTTGCTCCATATCGATCATAAGTCTTTCGATCATCTG
GGCTCATACTCTGAGGACTTCAACCTACAGTTCTGGCATGCTCCCTGACACGTTTTCACAAGATATGAGTCGGGAAGTGAGCTTGTTGGAGGGAGAACTAAGGTGCGACC
CAAAACGGTCTAAAAGATAG
mRNA sequenceShow/hide mRNA sequence
ATGCGAGCGAGAATGCCTCGGACTCAGTTTTCTCGTCTTGGGGTGAAAAGCGGTCCCTCGACGATTTCTTCTCTTTGCTCCATATCGATCATAAGTCTTTCGATCATCTG
GGCTCATACTCTGAGGACTTCAACCTACAGTTCTGGCATGCTCCCTGACACGTTTTCACAAGATATGAGTCGGGAAGTGAGCTTGTTGGAGGGAGAACTAAGGTGCGACC
CAAAACGGTCTAAAAGATAG
Protein sequenceShow/hide protein sequence
MRARMPRTQFSRLGVKSGPSTISSLCSISIISLSIIWAHTLRTSTYSSGMLPDTFSQDMSREVSLLEGELRCDPKRSKR