CuGenDBv2

Gene ID	IVF0002617
Organism	Cucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Description	pentatricopeptide repeat-containing protein At4g04790, mitochondrial-like isoform X1
Genome location	chr04:9513681..9517693
RNA-Seq Expression	IVF0002617
Synteny	IVF0002617
Gene Ontology terms	NA
InterPro domains	NA

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAA0046451.1 pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa]

2.17e-241

97.03

Show/hide

Query:  MRSKSKQLSSLFRSAIKAAKSSKNPQDAALQNNVSSIDPLSLSTSLYNAIYKRSVNSPTFKKLPQNPNSDVQFPALILEESSDSGDSVKHLTEAISSVLC
        MRSKSKQLSSLFRSAIKAAKSSKNPQDAALQNNVSSIDPLSLSTSLYNAIYKRSVNSPTFKKLPQNPNSDVQFPALILEESSDSGDSVKHLTEAISSVLC
Subjt:  MRSKSKQLSSLFRSAIKAAKSSKNPQDAALQNNVSSIDPLSLSTSLYNAIYKRSVNSPTFKKLPQNPNSDVQFPALILEESSDSGDSVKHLTEAISSVLC

Query:  EGSSVRSPEAQGNCVEKSLEKLLDIPWFSIKTNHSLTLHHKEISWER----------NDRFRRLVRSCADRLGSDVTLEVFGKLGRETGVKEYDALVGIC
        EGSSVRSPEAQGNCVEKSLEKLLDIPWFSIKTNHSLTLHHKEISWER          +DRFRRLVRSCADRLGSDVTLEVFGKLGRETGVKEYDALVGIC
Subjt:  EGSSVRSPEAQGNCVEKSLEKLLDIPWFSIKTNHSLTLHHKEISWER----------NDRFRRLVRSCADRLGSDVTLEVFGKLGRETGVKEYDALVGIC

Query:  LEKAKASNDVEVVLGQIGKVYQIFKSMKEQGFSLEDGTYGPVLACLIDMDMMEEFNFFCEAIKDGNPGSISRLGYYKMLFYIKINDEEKVQELCYRATVD
        LEKAKASNDVEVVLGQIGKVYQIFKSMKEQGFSLEDGTYGPVLACLIDMDMMEEFNFFCEAIKDGNPGSISRLGYYKMLFYIKINDEEKVQELCYRATVD
Subjt:  LEKAKASNDVEVVLGQIGKVYQIFKSMKEQGFSLEDGTYGPVLACLIDMDMMEEFNFFCEAIKDGNPGSISRLGYYKMLFYIKINDEEKVQELCYRATVD

Query:  DGVDKFSLQENYLLALCESEQTKQLLQMLEVIDITKLSTTVVAPIIFKCLGRLSLHTFAEKLLLAFKTSG
        DGVDKFSLQENYLLALCESEQTKQLLQMLEVIDITKLSTTVVAPIIFKCLGRLSLHTFAEKLLLAFKTSG
Subjt:  DGVDKFSLQENYLLALCESEQTKQLLQMLEVIDITKLSTTVVAPIIFKCLGRLSLHTFAEKLLLAFKTSG

KAE8637216.1 hypothetical protein CSA_021119 [Cucumis sativus]

1.34e-208

85.98

Show/hide

Query:  MRSKSKQLSSLFRSAIKAAKSSKNPQDAALQNNVSSIDPLSLSTSLYNAIYKRSVNSPTFKKLPQNPNSDVQFPALILEESSDSGDSVKHLTEAISSVLC
        MRSK   LSSL RSAI ++KSS+N QDAALQN VS+IDPLS STSL NAI     NSPT KKLPQNPNSDVQFPALILEESSDSGD  KHL +AISSVLC
Subjt:  MRSKSKQLSSLFRSAIKAAKSSKNPQDAALQNNVSSIDPLSLSTSLYNAIYKRSVNSPTFKKLPQNPNSDVQFPALILEESSDSGDSVKHLTEAISSVLC

Query:  EGSSVRSPEAQGNCVEKSLEKLLDIPWFSIKTNHSLTLHHKEISWER----------NDRFRRLVRSCADRLGSDVTLEVFGKLGRETGVKEYDALVGIC
        EGSSV SPEAQGNCVE+SLEKLLDIPWFSIKTNHSLTLH KEIS ER          +DRFRRLVRSCA+RLGSDVTLEVFGKLGRETGVKEY+ALVGIC
Subjt:  EGSSVRSPEAQGNCVEKSLEKLLDIPWFSIKTNHSLTLHHKEISWER----------NDRFRRLVRSCADRLGSDVTLEVFGKLGRETGVKEYDALVGIC

Query:  LEKAKASNDVEVVLGQIGKVYQIFKSMKEQGFSLEDGTYGPVLACLIDMDMMEEFNFFCEAIKDGNPGSISRLGYYKMLFYIKINDEEKVQELCYRATVD
        LEKAKAS DVEVVL QIGKVYQ+FK MKEQGFSLED TYGPVLACLIDMDMMEEFNFFCEAIKDGNPGSISRLGYYKMLFYIKINDEEKVQELCYRATVD
Subjt:  LEKAKASNDVEVVLGQIGKVYQIFKSMKEQGFSLEDGTYGPVLACLIDMDMMEEFNFFCEAIKDGNPGSISRLGYYKMLFYIKINDEEKVQELCYRATVD

Query:  DGVDKFSLQENYLLALCESEQTKQLLQMLEVIDITKLSTTVVAPIIFKCLGRLSLHTFAEKLLLAFKTSGM
        DGVDKFSLQENYLLALC SEQ K+LLQMLEVIDITKLSTTVVAP IFK LGRLSLHTFAEK LLAFKTSG+
Subjt:  DGVDKFSLQENYLLALCESEQTKQLLQMLEVIDITKLSTTVVAPIIFKCLGRLSLHTFAEKLLLAFKTSGM

XP_008454564.1 PREDICTED: pentatricopeptide repeat-containing protein At4g04790, mitochondrial-like isoform X1 [Cucumis melo]

3.92e-241

97.03

Show/hide

Query:  MRSKSKQLSSLFRSAIKAAKSSKNPQDAALQNNVSSIDPLSLSTSLYNAIYKRSVNSPTFKKLPQNPNSDVQFPALILEESSDSGDSVKHLTEAISSVLC
        MRSKSKQLSSLFRSAIKAAKSSKNPQDAALQNNVSSIDPLSLSTSLYNAIYKRSVNSPTFKKLPQNPNSDVQFPALILEESSDSGDSVKHLTEAISSVLC
Subjt:  MRSKSKQLSSLFRSAIKAAKSSKNPQDAALQNNVSSIDPLSLSTSLYNAIYKRSVNSPTFKKLPQNPNSDVQFPALILEESSDSGDSVKHLTEAISSVLC

Query:  EGSSVRSPEAQGNCVEKSLEKLLDIPWFSIKTNHSLTLHHKEISWER----------NDRFRRLVRSCADRLGSDVTLEVFGKLGRETGVKEYDALVGIC
        EGSSVRSPEAQGNCVEKSLEKLLDIPWFSIKTNHSLTLHHKEISWER          +DRFRRLVRSCADRLGSDVTLEVFGKLGRETGVKEYDALVGIC
Subjt:  EGSSVRSPEAQGNCVEKSLEKLLDIPWFSIKTNHSLTLHHKEISWER----------NDRFRRLVRSCADRLGSDVTLEVFGKLGRETGVKEYDALVGIC

Query:  LEKAKASNDVEVVLGQIGKVYQIFKSMKEQGFSLEDGTYGPVLACLIDMDMMEEFNFFCEAIKDGNPGSISRLGYYKMLFYIKINDEEKVQELCYRATVD
        LEKAKASNDVEVVLGQIGKVYQIFKSMKEQGFSLEDGTYGPVLACLIDMDMMEEFNFFCEAIKDGNPGSISRLGYYKMLFYIKINDEEKVQELCYRATVD
Subjt:  LEKAKASNDVEVVLGQIGKVYQIFKSMKEQGFSLEDGTYGPVLACLIDMDMMEEFNFFCEAIKDGNPGSISRLGYYKMLFYIKINDEEKVQELCYRATVD

Query:  DGVDKFSLQENYLLALCESEQTKQLLQMLEVIDITKLSTTVVAPIIFKCLGRLSLHTFAEKLLLAFKTSG
        DGVDKFSLQENYLLALCESEQTKQLLQMLEVIDITKLSTTVVAPIIFKCLGRLSLHTFAEKLLLAFKTSG
Subjt:  DGVDKFSLQENYLLALCESEQTKQLLQMLEVIDITKLSTTVVAPIIFKCLGRLSLHTFAEKLLLAFKTSG

XP_008454565.1 PREDICTED: pentatricopeptide repeat-containing protein At4g04790, mitochondrial-like isoform X2 [Cucumis melo]

2.75e-199

96.14

Show/hide

Query:  MRSKSKQLSSLFRSAIKAAKSSKNPQDAALQNNVSSIDPLSLSTSLYNAIYKRSVNSPTFKKLPQNPNSDVQFPALILEESSDSGDSVKHLTEAISSVLC
        MRSKSKQLSSLFRSAIKAAKSSKNPQDAALQNNVSSIDPLSLSTSLYNAIYKRSVNSPTFKKLPQNPNSDVQFPALILEESSDSGDSVKHLTEAISSVLC
Subjt:  MRSKSKQLSSLFRSAIKAAKSSKNPQDAALQNNVSSIDPLSLSTSLYNAIYKRSVNSPTFKKLPQNPNSDVQFPALILEESSDSGDSVKHLTEAISSVLC

Query:  EGSSVRSPEAQGNCVEKSLEKLLDIPWFSIKTNHSLTLHHKEISWER----------NDRFRRLVRSCADRLGSDVTLEVFGKLGRETGVKEYDALVGIC
        EGSSVRSPEAQGNCVEKSLEKLLDIPWFSIKTNHSLTLHHKEISWER          +DRFRRLVRSCADRLGSDVTLEVFGKLGRETGVKEYDALVGIC
Subjt:  EGSSVRSPEAQGNCVEKSLEKLLDIPWFSIKTNHSLTLHHKEISWER----------NDRFRRLVRSCADRLGSDVTLEVFGKLGRETGVKEYDALVGIC

Query:  LEKAKASNDVEVVLGQIGKVYQIFKSMKEQGFSLEDGTYGPVLACLIDMDMMEEFNFFCEAIKDGNPGSISRLGYYKMLFYIKINDEEKVQELCYRATVD
        LEKAKASNDVEVVLGQIGKVYQIFKSMKEQGFSLEDGTYGPVLACLIDMDMMEEFNFFCEAIKDGNPGSISRLGYYKMLFYIKINDEEKVQELCYRATVD
Subjt:  LEKAKASNDVEVVLGQIGKVYQIFKSMKEQGFSLEDGTYGPVLACLIDMDMMEEFNFFCEAIKDGNPGSISRLGYYKMLFYIKINDEEKVQELCYRATVD

Query:  DGVDKFSLQEN
        DGVDKFSLQ N
Subjt:  DGVDKFSLQEN

XP_011651464.1 pentatricopeptide repeat-containing protein At4g04790, mitochondrial [Cucumis sativus]

2.31e-201

86.22

Show/hide

Query:  MRSKSKQLSSLFRSAIKAAKSSKNPQDAALQNNVSSIDPLSLSTSLYNAIYKRSVNSPTFKKLPQNPNSDVQFPALILEESSDSGDSVKHLTEAISSVLC
        MRSK   LSSL RSAI ++KSS+N QDAALQN VS+IDPLS STSL NAI     NSPT KKLPQNPNSDVQFPALILEESSDSGD  KHL +AISSVLC
Subjt:  MRSKSKQLSSLFRSAIKAAKSSKNPQDAALQNNVSSIDPLSLSTSLYNAIYKRSVNSPTFKKLPQNPNSDVQFPALILEESSDSGDSVKHLTEAISSVLC

Query:  EGSSVRSPEAQGNCVEKSLEKLLDIPWFSIKTNHSLTLHHKEISWER----------NDRFRRLVRSCADRLGSDVTLEVFGKLGRETGVKEYDALVGIC
        EGSSV SPEAQGNCVE+SLEKLLDIPWFSIKTNHSLTLH KEIS ER          +DRFRRLVRSCA+RLGSDVTLEVFGKLGRETGVKEY+ALVGIC
Subjt:  EGSSVRSPEAQGNCVEKSLEKLLDIPWFSIKTNHSLTLHHKEISWER----------NDRFRRLVRSCADRLGSDVTLEVFGKLGRETGVKEYDALVGIC

Query:  LEKAKASNDVEVVLGQIGKVYQIFKSMKEQGFSLEDGTYGPVLACLIDMDMMEEFNFFCEAIKDGNPGSISRLGYYKMLFYIKINDEEKVQELCYRATVD
        LEKAKAS DVEVVL QIGKVYQ+FK MKEQGFSLED TYGPVLACLIDMDMMEEFNFFCEAIKDGNPGSISRLGYYKMLFYIKINDEEKVQELCYRATVD
Subjt:  LEKAKASNDVEVVLGQIGKVYQIFKSMKEQGFSLEDGTYGPVLACLIDMDMMEEFNFFCEAIKDGNPGSISRLGYYKMLFYIKINDEEKVQELCYRATVD

Query:  DGVDKFSLQENYLLALCESEQTKQLLQMLEVIDITKLSTTVVAPIIFKCLGRLSLHTFAEKLLLAFKTSG
        DGVDKFSLQENYLLALC SEQ K+LLQMLEVIDITKLSTTVVAP IFK LGRLSLHTFAEK LLAFKTSG
Subjt:  DGVDKFSLQENYLLALCESEQTKQLLQMLEVIDITKLSTTVVAPIIFKCLGRLSLHTFAEKLLLAFKTSG

TrEMBL top hits

e value

%identity

Alignment

A0A0A0L854 Uncharacterized protein

2.8e-168

86.02

Show/hide

Query:  MRSKSKQLSSLFRSAIKAAKSSKNPQDAALQNNVSSIDPLSLSTSLYNAIYKRSVNSPTFKKLPQNPNSDVQFPALILEESSDSGDSVKHLTEAISSVLC
        MRSK   LSSL RSAI ++KSS+N QDAALQN VS+IDPLS STSL NAI     NSPT KKLPQNPNSDVQFPALILEESSDSGD  KHL +AISSVLC
Subjt:  MRSKSKQLSSLFRSAIKAAKSSKNPQDAALQNNVSSIDPLSLSTSLYNAIYKRSVNSPTFKKLPQNPNSDVQFPALILEESSDSGDSVKHLTEAISSVLC

Query:  EGSSVRSPEAQGNCVEKSLEKLLDIPWFSIKTNHSLTLHHKEISWER----------NDRFRRLVRSCADRLGSDVTLEVFGKLGRETGVKEYDALVGIC
        EGSSV SPEAQGNCVE+SLEKLLDIPWFSIKTNHSLTLH KEIS ER          +DRFRRLVRSCA+RLGSDVTLEVFGKLGRETGVKEY+ALVGIC
Subjt:  EGSSVRSPEAQGNCVEKSLEKLLDIPWFSIKTNHSLTLHHKEISWER----------NDRFRRLVRSCADRLGSDVTLEVFGKLGRETGVKEYDALVGIC

Query:  LEKAKASNDVEVVLGQIGKVYQIFKSMKEQGFSLEDGTYGPVLACLIDMDMMEEFNFFCEAIKDGNPGSISRLGYYKMLFYIKINDEEKVQELCYRATVD
        LEKAKAS DVEVVL QIGKVYQ+FK MKEQGFSLED TYGPVLACLIDMDMMEEFNFFCEAIKDGNPGSISRLGYYKMLFYIKINDEEKVQELCYRATVD
Subjt:  LEKAKASNDVEVVLGQIGKVYQIFKSMKEQGFSLEDGTYGPVLACLIDMDMMEEFNFFCEAIKDGNPGSISRLGYYKMLFYIKINDEEKVQELCYRATVD

Query:  DGVDKFSLQENYLLALCESEQTKQLLQMLEVIDITKLSTTVVAPIIFKCLGRLSLHTFAEKLLLAFKTSGMLMIALNFY
        DGVDKFSLQENYLLALC SEQ K+LLQMLEVIDITKLSTTVVAP IFK LGRLSLHTFAEK LLAFKTSG LMIAL FY
Subjt:  DGVDKFSLQENYLLALCESEQTKQLLQMLEVIDITKLSTTVVAPIIFKCLGRLSLHTFAEKLLLAFKTSGMLMIALNFY

A0A1S3BYG2 pentatricopeptide repeat-containing protein At4g04790, mitochondrial-like isoform X2

1.7e-162

96.14

Show/hide

Query:  MRSKSKQLSSLFRSAIKAAKSSKNPQDAALQNNVSSIDPLSLSTSLYNAIYKRSVNSPTFKKLPQNPNSDVQFPALILEESSDSGDSVKHLTEAISSVLC
        MRSKSKQLSSLFRSAIKAAKSSKNPQDAALQNNVSSIDPLSLSTSLYNAIYKRSVNSPTFKKLPQNPNSDVQFPALILEESSDSGDSVKHLTEAISSVLC
Subjt:  MRSKSKQLSSLFRSAIKAAKSSKNPQDAALQNNVSSIDPLSLSTSLYNAIYKRSVNSPTFKKLPQNPNSDVQFPALILEESSDSGDSVKHLTEAISSVLC

Query:  EGSSVRSPEAQGNCVEKSLEKLLDIPWFSIKTNHSLTLHHKEISWER----------NDRFRRLVRSCADRLGSDVTLEVFGKLGRETGVKEYDALVGIC
        EGSSVRSPEAQGNCVEKSLEKLLDIPWFSIKTNHSLTLHHKEISWER          +DRFRRLVRSCADRLGSDVTLEVFGKLGRETGVKEYDALVGIC
Subjt:  EGSSVRSPEAQGNCVEKSLEKLLDIPWFSIKTNHSLTLHHKEISWER----------NDRFRRLVRSCADRLGSDVTLEVFGKLGRETGVKEYDALVGIC

Query:  LEKAKASNDVEVVLGQIGKVYQIFKSMKEQGFSLEDGTYGPVLACLIDMDMMEEFNFFCEAIKDGNPGSISRLGYYKMLFYIKINDEEKVQELCYRATVD
        LEKAKASNDVEVVLGQIGKVYQIFKSMKEQGFSLEDGTYGPVLACLIDMDMMEEFNFFCEAIKDGNPGSISRLGYYKMLFYIKINDEEKVQELCYRATVD
Subjt:  LEKAKASNDVEVVLGQIGKVYQIFKSMKEQGFSLEDGTYGPVLACLIDMDMMEEFNFFCEAIKDGNPGSISRLGYYKMLFYIKINDEEKVQELCYRATVD

Query:  DGVDKFSLQEN
        DGVDKFSLQ N
Subjt:  DGVDKFSLQEN

A0A1S3C047 pentatricopeptide repeat-containing protein At4g04790, mitochondrial-like isoform X1

1.5e-195

97.03

Show/hide

Query:  MRSKSKQLSSLFRSAIKAAKSSKNPQDAALQNNVSSIDPLSLSTSLYNAIYKRSVNSPTFKKLPQNPNSDVQFPALILEESSDSGDSVKHLTEAISSVLC
        MRSKSKQLSSLFRSAIKAAKSSKNPQDAALQNNVSSIDPLSLSTSLYNAIYKRSVNSPTFKKLPQNPNSDVQFPALILEESSDSGDSVKHLTEAISSVLC
Subjt:  MRSKSKQLSSLFRSAIKAAKSSKNPQDAALQNNVSSIDPLSLSTSLYNAIYKRSVNSPTFKKLPQNPNSDVQFPALILEESSDSGDSVKHLTEAISSVLC

Query:  EGSSVRSPEAQGNCVEKSLEKLLDIPWFSIKTNHSLTLHHKEISWER----------NDRFRRLVRSCADRLGSDVTLEVFGKLGRETGVKEYDALVGIC
        EGSSVRSPEAQGNCVEKSLEKLLDIPWFSIKTNHSLTLHHKEISWER          +DRFRRLVRSCADRLGSDVTLEVFGKLGRETGVKEYDALVGIC
Subjt:  EGSSVRSPEAQGNCVEKSLEKLLDIPWFSIKTNHSLTLHHKEISWER----------NDRFRRLVRSCADRLGSDVTLEVFGKLGRETGVKEYDALVGIC

Query:  LEKAKASNDVEVVLGQIGKVYQIFKSMKEQGFSLEDGTYGPVLACLIDMDMMEEFNFFCEAIKDGNPGSISRLGYYKMLFYIKINDEEKVQELCYRATVD
        LEKAKASNDVEVVLGQIGKVYQIFKSMKEQGFSLEDGTYGPVLACLIDMDMMEEFNFFCEAIKDGNPGSISRLGYYKMLFYIKINDEEKVQELCYRATVD
Subjt:  LEKAKASNDVEVVLGQIGKVYQIFKSMKEQGFSLEDGTYGPVLACLIDMDMMEEFNFFCEAIKDGNPGSISRLGYYKMLFYIKINDEEKVQELCYRATVD

Query:  DGVDKFSLQENYLLALCESEQTKQLLQMLEVIDITKLSTTVVAPIIFKCLGRLSLHTFAEKLLLAFKTSG
        DGVDKFSLQENYLLALCESEQTKQLLQMLEVIDITKLSTTVVAPIIFKCLGRLSLHTFAEKLLLAFKTSG
Subjt:  DGVDKFSLQENYLLALCESEQTKQLLQMLEVIDITKLSTTVVAPIIFKCLGRLSLHTFAEKLLLAFKTSG

A0A5D3BES4 Pentatricopeptide repeat-containing protein

1.5e-195

97.03

Show/hide

Query:  MRSKSKQLSSLFRSAIKAAKSSKNPQDAALQNNVSSIDPLSLSTSLYNAIYKRSVNSPTFKKLPQNPNSDVQFPALILEESSDSGDSVKHLTEAISSVLC
        MRSKSKQLSSLFRSAIKAAKSSKNPQDAALQNNVSSIDPLSLSTSLYNAIYKRSVNSPTFKKLPQNPNSDVQFPALILEESSDSGDSVKHLTEAISSVLC
Subjt:  MRSKSKQLSSLFRSAIKAAKSSKNPQDAALQNNVSSIDPLSLSTSLYNAIYKRSVNSPTFKKLPQNPNSDVQFPALILEESSDSGDSVKHLTEAISSVLC

Query:  EGSSVRSPEAQGNCVEKSLEKLLDIPWFSIKTNHSLTLHHKEISWER----------NDRFRRLVRSCADRLGSDVTLEVFGKLGRETGVKEYDALVGIC
        EGSSVRSPEAQGNCVEKSLEKLLDIPWFSIKTNHSLTLHHKEISWER          +DRFRRLVRSCADRLGSDVTLEVFGKLGRETGVKEYDALVGIC
Subjt:  EGSSVRSPEAQGNCVEKSLEKLLDIPWFSIKTNHSLTLHHKEISWER----------NDRFRRLVRSCADRLGSDVTLEVFGKLGRETGVKEYDALVGIC

Query:  LEKAKASNDVEVVLGQIGKVYQIFKSMKEQGFSLEDGTYGPVLACLIDMDMMEEFNFFCEAIKDGNPGSISRLGYYKMLFYIKINDEEKVQELCYRATVD
        LEKAKASNDVEVVLGQIGKVYQIFKSMKEQGFSLEDGTYGPVLACLIDMDMMEEFNFFCEAIKDGNPGSISRLGYYKMLFYIKINDEEKVQELCYRATVD
Subjt:  LEKAKASNDVEVVLGQIGKVYQIFKSMKEQGFSLEDGTYGPVLACLIDMDMMEEFNFFCEAIKDGNPGSISRLGYYKMLFYIKINDEEKVQELCYRATVD

Query:  DGVDKFSLQENYLLALCESEQTKQLLQMLEVIDITKLSTTVVAPIIFKCLGRLSLHTFAEKLLLAFKTSG
        DGVDKFSLQENYLLALCESEQTKQLLQMLEVIDITKLSTTVVAPIIFKCLGRLSLHTFAEKLLLAFKTSG
Subjt:  DGVDKFSLQENYLLALCESEQTKQLLQMLEVIDITKLSTTVVAPIIFKCLGRLSLHTFAEKLLLAFKTSG

A0A6J1ITU1 pentatricopeptide repeat-containing protein At4g04790, mitochondrial-like isoform X1

3.2e-140

72.7

Show/hide

Query:  MRSKSKQLSSLFRSAIKAAKSSKNPQDAALQNNVSSIDPLSLSTSLYNAIYKRSVNSPTFKKLPQNPNSDVQFPALILEESSDSGDSVKHLTEAISSVLC
        M SKSK LSSLFRSAI A+K S+NPQDAAL+N VS+IDP S STSL  AI KRS+ S   KKLPQ  NSDVQFPALILEE S SGDS+KHLT+AISS+LC
Subjt:  MRSKSKQLSSLFRSAIKAAKSSKNPQDAALQNNVSSIDPLSLSTSLYNAIYKRSVNSPTFKKLPQNPNSDVQFPALILEESSDSGDSVKHLTEAISSVLC

Query:  EGSSVRSPEAQGNCVEKSLEKLLDIPWFSIKTNHSLTLHHKEISWER----------NDRFRRLVRSCADRLGSDVTLEVFGKLGRETGVKEYDALVGIC
        EGSSVRSP+AQ N  E SL++LLDIPWFS  +NHS++L  +EIS ER          N RF +LVR+CA +LG+DVTLEVFGKLGRETGVKEY+AL+ IC
Subjt:  EGSSVRSPEAQGNCVEKSLEKLLDIPWFSIKTNHSLTLHHKEISWER----------NDRFRRLVRSCADRLGSDVTLEVFGKLGRETGVKEYDALVGIC

Query:  LEKAKASNDVEVVLGQIGKVYQIFKSMKEQGFSLEDGTYGPVLACLIDMDMMEEFNFFCEAIKDGNPGSISRLGYYKMLFYIKINDEEKVQELCYRATVD
        LEKAK S D+EVVL  I KVYQ+FK MKE GF LED TYGPVLA LIDMDMMEEFNFFCEA+KDGNPGS SRLGYY+MLFY+KIND EK+QELC  AT  
Subjt:  LEKAKASNDVEVVLGQIGKVYQIFKSMKEQGFSLEDGTYGPVLACLIDMDMMEEFNFFCEAIKDGNPGSISRLGYYKMLFYIKINDEEKVQELCYRATVD

Query:  DGVDKFSLQENYLLALCESEQTKQLLQMLEVIDITKLSTTVVAPIIFKCLGRLSLHTFAEKLLLAFKTSG
        DGVDK+SLQENYLLALCE EQ ++LLQMLE++DITKL++TV+A  IFKCLGRL LH+ AEKLL+A KTSG
Subjt:  DGVDKFSLQENYLLALCESEQTKQLLQMLEVIDITKLSTTVVAPIIFKCLGRLSLHTFAEKLLLAFKTSG

SwissProt top hits

e value

%identity

Alignment

O49711 Pentatricopeptide repeat-containing protein At4g21880, mitochondrial

1.1e-41

40.38

Show/hide

Query:  ERNDRFRRLVRSCADRLGSDVTLEVFGKLGRETGVKEYDALVGICLEKAKASNDVEVVLGQIGKVYQIFKSMKEQGFSLEDGTYGPVLACLIDMDMMEEF
        ++++   +L + C  +LG++   EV  K+G+E G KEY+A+  +C+++A+ SND E  L QIGK  +  K M++ GFS+ +G YGP    L+DM+M+ EF
Subjt:  ERNDRFRRLVRSCADRLGSDVTLEVFGKLGRETGVKEYDALVGICLEKAKASNDVEVVLGQIGKVYQIFKSMKEQGFSLEDGTYGPVLACLIDMDMMEEF

Query:  NFFCEAIKDGNPGSISRLGYYKMLFYIKINDEEKVQELCYRATVDDGVDKFSLQENYLLALCESEQTKQLLQMLEVIDITKLSTTVVAPIIFKCLGRLSL
            + IK+  P S  RL YY+ML +I++NDEEK+ +LC +   D G+    LQE YL+ALCE +  +   ++LE++DIT +S+      IF  LG+  L
Subjt:  NFFCEAIKDGNPGSISRLGYYKMLFYIKINDEEKVQELCYRATVDDGVDKFSLQENYLLALCESEQTKQLLQMLEVIDITKLSTTVVAPIIFKCLGRLSL

Query:  HTFAEKLL
         + A KLL
Subjt:  HTFAEKLL

Q6NQ81 Pentatricopeptide repeat-containing protein At4g04790, mitochondrial

2.0e-51

35.63

Show/hide

Query:  LSTSLYNAIYKRSVNSPTFKKLPQNPNSDVQFPALILEESSDSGDSVKHLTEA-----ISSVLCEGSSVRSPEAQGNCVEKSLEKLLDIPWFSIKTNHSL
        ++ SL ++++K  +  PT +    + N D+   +  +++   S +S   L EA     +S +L   +S +S       +EK+L   L IP F+ K  + +
Subjt:  LSTSLYNAIYKRSVNSPTFKKLPQNPNSDVQFPALILEESSDSGDSVKHLTEA-----ISSVLCEGSSVRSPEAQGNCVEKSLEKLLDIPWFSIKTNHSL

Query:  TLHHKEISWERND-----------RFRRLVRSCADRLGSDVTLEVFGKLGRETGVKEYDALVGICLEKAKASNDVEVVLGQIGKVYQIFKSMKEQGFSLE
        +L  KE+S ER +           RF ++ R  A +LG++     F ++ +E  V EY+A++G+ LE A+ SND++  LG I K +++ KSM+++GF +E
Subjt:  TLHHKEISWERND-----------RFRRLVRSCADRLGSDVTLEVFGKLGRETGVKEYDALVGICLEKAKASNDVEVVLGQIGKVYQIFKSMKEQGFSLE

Query:  DGTYGPVLACLIDMDMMEEFNFFCEAIKDGNPGSISRLGYYKMLFYIKINDEEKVQELCYRATVDDGVDKFSLQENYLLALCESEQTKQLLQMLEVIDIT
        +  YGP+L  LI MDM++EF+ F + I++ +PGS+ RLGYY+ML +I + D EK++ELC     D+G     LQENYLLALC+ +Q   L ++LE++DIT
Subjt:  DGTYGPVLACLIDMDMMEEFNFFCEAIKDGNPGSISRLGYYKMLFYIKINDEEKVQELCYRATVDDGVDKFSLQENYLLALCESEQTKQLLQMLEVIDIT

Query:  KLSTTVVAPIIFKCLGRLSLHTFAEKLLLAFKTS
        K+ ++ +   IF+ LGR SL + A + L   + S
Subjt:  KLSTTVVAPIIFKCLGRLSLHTFAEKLLLAFKTS

Arabidopsis top hits

e value

%identity

Alignment

AT4G04790.1 Tetratricopeptide repeat (TPR)-like superfamily protein

1.4e-52

35.63

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Query:  LSTSLYNAIYKRSVNSPTFKKLPQNPNSDVQFPALILEESSDSGDSVKHLTEA-----ISSVLCEGSSVRSPEAQGNCVEKSLEKLLDIPWFSIKTNHSL
        ++ SL ++++K  +  PT +    + N D+   +  +++   S +S   L EA     +S +L   +S +S       +EK+L   L IP F+ K  + +
Subjt:  LSTSLYNAIYKRSVNSPTFKKLPQNPNSDVQFPALILEESSDSGDSVKHLTEA-----ISSVLCEGSSVRSPEAQGNCVEKSLEKLLDIPWFSIKTNHSL

Query:  TLHHKEISWERND-----------RFRRLVRSCADRLGSDVTLEVFGKLGRETGVKEYDALVGICLEKAKASNDVEVVLGQIGKVYQIFKSMKEQGFSLE
        +L  KE+S ER +           RF ++ R  A +LG++     F ++ +E  V EY+A++G+ LE A+ SND++  LG I K +++ KSM+++GF +E
Subjt:  TLHHKEISWERND-----------RFRRLVRSCADRLGSDVTLEVFGKLGRETGVKEYDALVGICLEKAKASNDVEVVLGQIGKVYQIFKSMKEQGFSLE

Query:  DGTYGPVLACLIDMDMMEEFNFFCEAIKDGNPGSISRLGYYKMLFYIKINDEEKVQELCYRATVDDGVDKFSLQENYLLALCESEQTKQLLQMLEVIDIT
        +  YGP+L  LI MDM++EF+ F + I++ +PGS+ RLGYY+ML +I + D EK++ELC     D+G     LQENYLLALC+ +Q   L ++LE++DIT
Subjt:  DGTYGPVLACLIDMDMMEEFNFFCEAIKDGNPGSISRLGYYKMLFYIKINDEEKVQELCYRATVDDGVDKFSLQENYLLALCESEQTKQLLQMLEVIDIT

Query:  KLSTTVVAPIIFKCLGRLSLHTFAEKLLLAFKTS
        K+ ++ +   IF+ LGR SL + A + L   + S
Subjt:  KLSTTVVAPIIFKCLGRLSLHTFAEKLLLAFKTS

AT4G21880.1 Pentatricopeptide repeat (PPR) superfamily protein

7.9e-43

40.38

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Query:  ERNDRFRRLVRSCADRLGSDVTLEVFGKLGRETGVKEYDALVGICLEKAKASNDVEVVLGQIGKVYQIFKSMKEQGFSLEDGTYGPVLACLIDMDMMEEF
        ++++   +L + C  +LG++   EV  K+G+E G KEY+A+  +C+++A+ SND E  L QIGK  +  K M++ GFS+ +G YGP    L+DM+M+ EF
Subjt:  ERNDRFRRLVRSCADRLGSDVTLEVFGKLGRETGVKEYDALVGICLEKAKASNDVEVVLGQIGKVYQIFKSMKEQGFSLEDGTYGPVLACLIDMDMMEEF

Query:  NFFCEAIKDGNPGSISRLGYYKMLFYIKINDEEKVQELCYRATVDDGVDKFSLQENYLLALCESEQTKQLLQMLEVIDITKLSTTVVAPIIFKCLGRLSL
            + IK+  P S  RL YY+ML +I++NDEEK+ +LC +   D G+    LQE YL+ALCE +  +   ++LE++DIT +S+      IF  LG+  L
Subjt:  NFFCEAIKDGNPGSISRLGYYKMLFYIKINDEEKVQELCYRATVDDGVDKFSLQENYLLALCESEQTKQLLQMLEVIDITKLSTTVVAPIIFKCLGRLSL

Query:  HTFAEKLL
         + A KLL
Subjt:  HTFAEKLL

Sequences

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CDS sequence

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ATGCGTTCCAAATCCAAACAACTAAGCTCACTATTCCGCTCCGCCATTAAAGCTGCAAAGTCTTCAAAGAATCCCCAAGATGCCGCTCTTCAAAACAACGTTTCCTCTAT
CGATCCTTTATCTCTCAGCACCTCTCTCTATAACGCCATCTATAAGCGTTCCGTCAACTCCCCGACCTTCAAGAAGCTTCCCCAGAACCCCAATTCTGACGTTCAATTTC
CTGCTCTCATTCTAGAAGAGTCTTCGGATTCTGGGGATTCTGTGAAGCATCTAACCGAGGCCATATCTTCCGTTCTGTGCGAAGGCTCATCTGTTAGGTCTCCTGAAGCA
CAAGGAAATTGTGTTGAAAAATCTTTGGAAAAATTATTAGATATACCATGGTTTTCCATCAAAACAAATCATAGCTTAACATTACATCACAAAGAAATATCCTGGGAAAG
AAACGATAGATTTAGACGATTAGTTAGAAGTTGTGCAGACAGGCTGGGGAGTGATGTTACTCTTGAAGTCTTTGGTAAATTGGGACGAGAAACTGGTGTGAAAGAATACG
ATGCACTAGTAGGTATATGTTTAGAGAAGGCTAAGGCAAGTAACGACGTGGAGGTTGTATTGGGACAGATAGGGAAGGTTTATCAGATATTTAAATCAATGAAAGAACAG
GGTTTTTCTTTAGAAGATGGAACTTATGGCCCAGTGCTCGCGTGTTTAATTGACATGGACATGATGGAAGAATTTAATTTTTTCTGTGAGGCTATAAAAGATGGAAATCC
AGGCTCAATATCAAGGTTGGGTTACTATAAAATGTTGTTCTATATTAAAATCAACGATGAAGAAAAAGTTCAGGAGCTTTGTTACCGTGCTACAGTTGATGATGGAGTGG
ACAAGTTCAGTTTACAAGAAAATTATTTGTTGGCGCTCTGTGAAAGTGAGCAGACAAAGCAACTTTTACAGATGCTGGAGGTTATAGACATCACAAAACTTTCGACAACT
GTAGTTGCACCTATCATCTTCAAATGCTTAGGGAGGCTATCACTTCACACTTTTGCAGAGAAGTTGCTTTTGGCATTTAAAACTTCTGGTATGTTGATGATTGCCTTAAA
CTTTTATTAA

mRNA sequence

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Protein sequence

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MRSKSKQLSSLFRSAIKAAKSSKNPQDAALQNNVSSIDPLSLSTSLYNAIYKRSVNSPTFKKLPQNPNSDVQFPALILEESSDSGDSVKHLTEAISSVLCEGSSVRSPEA
QGNCVEKSLEKLLDIPWFSIKTNHSLTLHHKEISWERNDRFRRLVRSCADRLGSDVTLEVFGKLGRETGVKEYDALVGICLEKAKASNDVEVVLGQIGKVYQIFKSMKEQ
GFSLEDGTYGPVLACLIDMDMMEEFNFFCEAIKDGNPGSISRLGYYKMLFYIKINDEEKVQELCYRATVDDGVDKFSLQENYLLALCESEQTKQLLQMLEVIDITKLSTT
VVAPIIFKCLGRLSLHTFAEKLLLAFKTSGMLMIALNFY

IVF0002617 (gene) of Melon (IVF77) v1 genome