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IVF0002628 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0002628
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionAquarius
Genome locationchr10:140472..141644
RNA-Seq ExpressionIVF0002628
SyntenyIVF0002628
Gene Ontology termsGO:0000398 - mRNA splicing, via spliceosome (biological process)
GO:0005681 - spliceosomal complex (cellular component)
GO:0004386 - helicase activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
ADN34203.1 aquarius [Cucumis melo subsp. melo]5.33e-37100Show/hide
Query:  VNLDHSLHLALPYFTPPHISLRRRFSLSRLGFSSHAVAGLTLSLSSRLLLLSVRRPRLLISPSPPAFSQSTSRTS
        VNLDHSLHLALPYFTPPHISLRRRFSLSRLGFSSHAVAGLTLSLSSRLLLLSVRRPRLLISPSPPAFSQSTSRTS
Subjt:  VNLDHSLHLALPYFTPPHISLRRRFSLSRLGFSSHAVAGLTLSLSSRLLLLSVRRPRLLISPSPPAFSQSTSRTS

KAA0034743.1 aquarius [Cucumis melo var. makuwa]2.38e-3890.8Show/hide
Query:  LTQYYIRFNLPLVNLDHSLHLALPYFTPPHISLRRRFSLSRLGFSSHAVAGLTLSLSSRLLLLSVRRPRLLISPSPPAFSQSTSRTS
        + Q  IRF    VNLDHSLHLALPYFTPPHISLRRRFSLSRLGFSSHAVAGLTLSLSSRLLLLSVRRPRLLISPSPPAFSQSTSRTS
Subjt:  LTQYYIRFNLPLVNLDHSLHLALPYFTPPHISLRRRFSLSRLGFSSHAVAGLTLSLSSRLLLLSVRRPRLLISPSPPAFSQSTSRTS

KGN52296.1 hypothetical protein Csa_008219 [Cucumis sativus]6.29e-2464.08Show/hide
Query:  MSRSLNLTQYYIRFNLPLVNLDHSLHLALPYFTPPHISLRRRFSLSRLGFSSHAVAGLTLSLSSRLLLLSVRRPRLLISPSPPAFSQSTSRTSCYLFLTR
        MSRSLNLTQ+YI F LPL++   S+H A  +            S SRLGF SH VAG+TLSLSSRLLLL VRR R LIS SP AFSQSTSRTS + FLTR
Subjt:  MSRSLNLTQYYIRFNLPLVNLDHSLHLALPYFTPPHISLRRRFSLSRLGFSSHAVAGLTLSLSSRLLLLSVRRPRLLISPSPPAFSQSTSRTSCYLFLTR

Query:  CIL
        CIL
Subjt:  CIL

TYK09296.1 aquarius [Cucumis melo var. makuwa]2.38e-3890.8Show/hide
Query:  LTQYYIRFNLPLVNLDHSLHLALPYFTPPHISLRRRFSLSRLGFSSHAVAGLTLSLSSRLLLLSVRRPRLLISPSPPAFSQSTSRTS
        + Q  IRF    VNLDHSLHLALPYFTPPHISLRRRFSLSRLGFSSHAVAGLTLSLSSRLLLLSVRRPRLLISPSPPAFSQSTSRTS
Subjt:  LTQYYIRFNLPLVNLDHSLHLALPYFTPPHISLRRRFSLSRLGFSSHAVAGLTLSLSSRLLLLSVRRPRLLISPSPPAFSQSTSRTS

TrEMBL top hitse value%identityAlignment
A0A0A0KWV6 Uncharacterized protein1.2e-1764.08Show/hide
Query:  MSRSLNLTQYYIRFNLPLVNLDHSLHLALPYFTPPHISLRRRFSLSRLGFSSHAVAGLTLSLSSRLLLLSVRRPRLLISPSPPAFSQSTSRTSCYLFLTR
        MSRSLNLTQ+YI F LPL++   S+H A  +            S SRLGF SH VAG+TLSLSSRLLLL VRR R LIS SP AFSQSTSRTS + FLTR
Subjt:  MSRSLNLTQYYIRFNLPLVNLDHSLHLALPYFTPPHISLRRRFSLSRLGFSSHAVAGLTLSLSSRLLLLSVRRPRLLISPSPPAFSQSTSRTSCYLFLTR

Query:  CIL
        CIL
Subjt:  CIL

A0A5A7SW59 Aquarius2.3e-3287.91Show/hide
Query:  RSLNLTQYYIRFNLPLVNLDHSLHLALPYFTPPHISLRRRFSLSRLGFSSHAVAGLTLSLSSRLLLLSVRRPRLLISPSPPAFSQSTSRTS
        R   + Q  IRF    VNLDHSLHLALPYFTPPHISLRRRFSLSRLGFSSHAVAGLTLSLSSRLLLLSVRRPRLLISPSPPAFSQSTSRTS
Subjt:  RSLNLTQYYIRFNLPLVNLDHSLHLALPYFTPPHISLRRRFSLSRLGFSSHAVAGLTLSLSSRLLLLSVRRPRLLISPSPPAFSQSTSRTS

A0A5D3CG09 Aquarius2.3e-3287.91Show/hide
Query:  RSLNLTQYYIRFNLPLVNLDHSLHLALPYFTPPHISLRRRFSLSRLGFSSHAVAGLTLSLSSRLLLLSVRRPRLLISPSPPAFSQSTSRTS
        R   + Q  IRF    VNLDHSLHLALPYFTPPHISLRRRFSLSRLGFSSHAVAGLTLSLSSRLLLLSVRRPRLLISPSPPAFSQSTSRTS
Subjt:  RSLNLTQYYIRFNLPLVNLDHSLHLALPYFTPPHISLRRRFSLSRLGFSSHAVAGLTLSLSSRLLLLSVRRPRLLISPSPPAFSQSTSRTS

E5GCK6 Aquarius7.5e-31100Show/hide
Query:  VNLDHSLHLALPYFTPPHISLRRRFSLSRLGFSSHAVAGLTLSLSSRLLLLSVRRPRLLISPSPPAFSQSTSRTS
        VNLDHSLHLALPYFTPPHISLRRRFSLSRLGFSSHAVAGLTLSLSSRLLLLSVRRPRLLISPSPPAFSQSTSRTS
Subjt:  VNLDHSLHLALPYFTPPHISLRRRFSLSRLGFSSHAVAGLTLSLSSRLLLLSVRRPRLLISPSPPAFSQSTSRTS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGTAGATCTTTGAATTTGACCCAATACTACATCCGCTTCAATCTTCCTCTGGTAAACTTAGATCACAGTTTACACCTGGCACTTCCCTACTTCACGCCGCCTCATAT
CTCTCTGCGACGCCGATTCTCCCTCTCTCGTCTCGGCTTCTCATCCCACGCAGTAGCCGGCCTTACCCTCTCACTCTCGTCTCGGCTTTTGCTTCTTAGTGTCCGTCGCC
CTCGGCTTCTCATTTCACCGTCTCCGCCGGCGTTCTCTCAGTCTACCTCTCGGACTTCATGTTACTTATTTTTGACACGCTGCATACTTTGA
mRNA sequenceShow/hide mRNA sequence
ATGAGTAGATCTTTGAATTTGACCCAATACTACATCCGCTTCAATCTTCCTCTGGTAAACTTAGATCACAGTTTACACCTGGCACTTCCCTACTTCACGCCGCCTCATAT
CTCTCTGCGACGCCGATTCTCCCTCTCTCGTCTCGGCTTCTCATCCCACGCAGTAGCCGGCCTTACCCTCTCACTCTCGTCTCGGCTTTTGCTTCTTAGTGTCCGTCGCC
CTCGGCTTCTCATTTCACCGTCTCCGCCGGCGTTCTCTCAGTCTACCTCTCGGACTTCATGTTACTTATTTTTGACACGCTGCATACTTTGA
Protein sequenceShow/hide protein sequence
MSRSLNLTQYYIRFNLPLVNLDHSLHLALPYFTPPHISLRRRFSLSRLGFSSHAVAGLTLSLSSRLLLLSVRRPRLLISPSPPAFSQSTSRTSCYLFLTRCIL