CuGenDBv2

Gene ID	IVF0002631
Organism	Cucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Description	Transcription termination factor MTEF1
Genome location	tig00000060:392086..393183
RNA-Seq Expression	IVF0002631
Synteny	IVF0002631
Gene Ontology terms	GO:0006353 - DNA-templated transcription, termination (biological process) GO:0006355 - regulation of transcription, DNA-templated (biological process) GO:0003690 - double-stranded DNA binding (molecular function)
InterPro domains	IPR003690 - Transcription termination factor, mitochondrial/chloroplastic IPR038538 - MTERF superfamily, mitochondrial/chloroplastic

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAA0049463.1 transcription termination factor MTEF1 [Cucumis melo var. makuwa]

1.70e-246

100

Show/hide

Query:  MYNLFRRTILLRPSSSVFSHGFSECPLKSLRYLSTSSDIVSSPTSAPLASNALQHKNKRKAVIALLADHGFSESQISDLDKRFPQILSANPEKSLLPKLL
        MYNLFRRTILLRPSSSVFSHGFSECPLKSLRYLSTSSDIVSSPTSAPLASNALQHKNKRKAVIALLADHGFSESQISDLDKRFPQILSANPEKSLLPKLL
Subjt:  MYNLFRRTILLRPSSSVFSHGFSECPLKSLRYLSTSSDIVSSPTSAPLASNALQHKNKRKAVIALLADHGFSESQISDLDKRFPQILSANPEKSLLPKLL

Query:  FFQSKGLSSPEIVKLVCSFPRVLTGSLDKRIIPAFDYIQAVLGSEEKTLASIKQFAGILVKDLRISAGPNIEILKQIGVPDSNIFKYLQYQPRVFLINPV
        FFQSKGLSSPEIVKLVCSFPRVLTGSLDKRIIPAFDYIQAVLGSEEKTLASIKQFAGILVKDLRISAGPNIEILKQIGVPDSNIFKYLQYQPRVFLINPV
Subjt:  FFQSKGLSSPEIVKLVCSFPRVLTGSLDKRIIPAFDYIQAVLGSEEKTLASIKQFAGILVKDLRISAGPNIEILKQIGVPDSNIFKYLQYQPRVFLINPV

Query:  RFKETVERVTEMGFNPQQLQFVVAVFILRAMTKSTWDKKVEVYRKWGLSEEEILLAFRRHPWSMMRSEDKINGAMDFFVNKMGCEASFAARRPILLSLSL
        RFKETVERVTEMGFNPQQLQFVVAVFILRAMTKSTWDKKVEVYRKWGLSEEEILLAFRRHPWSMMRSEDKINGAMDFFVNKMGCEASFAARRPILLSLSL
Subjt:  RFKETVERVTEMGFNPQQLQFVVAVFILRAMTKSTWDKKVEVYRKWGLSEEEILLAFRRHPWSMMRSEDKINGAMDFFVNKMGCEASFAARRPILLSLSL

Query:  KKRILPRGYVYQVLLSKGLIKKHQNLILFFESSENCFIEKFINPHKEQIPGLLEL
        KKRILPRGYVYQVLLSKGLIKKHQNLILFFESSENCFIEKFINPHKEQIPGLLEL
Subjt:  KKRILPRGYVYQVLLSKGLIKKHQNLILFFESSENCFIEKFINPHKEQIPGLLEL

KAA0049469.1 transcription termination factor MTEF1 [Cucumis melo var. makuwa]

1.80e-211

83.56

Show/hide

Query:  MYNLFRRTILLRPSSSVFSHGFSECPLKSLRYLSTSSDIVSSPTSAPLASNALQHKNKRKAVIALLADHGFSESQISDLDKRFPQILSANPEKSLLPKLL
        M N+FRR +LLR  S VF  GFS+ PLKSLRYLSTSS+IVSSP SAPLASNA+Q KNKRKAVIALLADHGFSESQIS LDKR+PQILSANPEK LLPKLL
Subjt:  MYNLFRRTILLRPSSSVFSHGFSECPLKSLRYLSTSSDIVSSPTSAPLASNALQHKNKRKAVIALLADHGFSESQISDLDKRFPQILSANPEKSLLPKLL

Query:  FFQSKGLSSPEIVKLVCSFPRVLTGSLDKRIIPAFDYIQAVLGSEEKTLASIKQFAGILVKDLRISAGPNIEILKQIGVPDSNIFKYLQYQPRVFLINPV
        FFQSKGLSSPEI KLVCSFPRVL GSLD RIIPAFDYIQAVLGSEEKTLA IK F  IL  DLRIS GPNIEILKQIGVPDSNI KY QYQPRVF  N +
Subjt:  FFQSKGLSSPEIVKLVCSFPRVLTGSLDKRIIPAFDYIQAVLGSEEKTLASIKQFAGILVKDLRISAGPNIEILKQIGVPDSNIFKYLQYQPRVFLINPV

Query:  RFKETVERVTEMGFNPQQLQFVVAVFILRAMTKSTWDKKVEVYRKWGLSEEEILLAFRRHPWSMMRSEDKINGAMDFFVNKMGCEASFAARRPILLSLSL
        RFKETVERVTEMGFNPQ+LQF+VAVF LRAMTKSTWDKKVEVYRKWGLSEEEI LAF+RHPW MM SEDKINGAMDFFVNK+GCE+SF ARRP L+SLSL
Subjt:  RFKETVERVTEMGFNPQQLQFVVAVFILRAMTKSTWDKKVEVYRKWGLSEEEILLAFRRHPWSMMRSEDKINGAMDFFVNKMGCEASFAARRPILLSLSL

Query:  KKRILPRGYVYQVLLSKGLIKKHQNLILFFESSENCFIEKFINPHKEQIPGLLELYKQKLMDSRR
        KKR+ PRGYVYQVLL KGLIKK  N+ LF  SSEN FI+KFINPHKE+IPGLLE Y+QKLMDSRR
Subjt:  KKRILPRGYVYQVLLSKGLIKKHQNLILFFESSENCFIEKFINPHKEQIPGLLELYKQKLMDSRR

KAA0049473.1 transcription termination factor MTEF1 [Cucumis melo var. makuwa]

9.43e-207

81.1

Show/hide

Query:  MYNLFRRTILLRPSSSVFSHGFSECPLKSLRYLSTSSDIVSSPTSAPLASNALQHKNKRKAVIALLADHGFSESQISDLDKRFPQILSANPEKSLLPKLL
        M NLFR  +LL+  S VFS GFS  PLKS+R+LSTSS+IVSS  SAPLASNA Q KNKRKAVIALLAD+G SESQIS LDKR+PQILSANPEK+LLPKLL
Subjt:  MYNLFRRTILLRPSSSVFSHGFSECPLKSLRYLSTSSDIVSSPTSAPLASNALQHKNKRKAVIALLADHGFSESQISDLDKRFPQILSANPEKSLLPKLL

Query:  FFQSKGLSSPEIVKLVCSFPRVLTGSLDKRIIPAFDYIQAVLGSEEKTLASIKQFAGILVKDLRISAGPNIEILKQIGVPDSNIFKYLQYQPRVFLINPV
        FF+SKGLSSPEI K+VCSFPRV  GSLDKRIIP F YIQA+LGSEEKTL +IK+FAGIL  DLRISAGP+IEILKQ GVPDSNI KYLQ+QPR+FL NP+
Subjt:  FFQSKGLSSPEIVKLVCSFPRVLTGSLDKRIIPAFDYIQAVLGSEEKTLASIKQFAGILVKDLRISAGPNIEILKQIGVPDSNIFKYLQYQPRVFLINPV

Query:  RFKETVERVTEMGFNPQQLQFVVAVFILRAMTKSTWDKKVEVYRKWGLSEEEILLAFRRHPWSMMRSEDKINGAMDFFVNKMGCEASFAARRPILLSLSL
        RFKE+VERVTEMGFNPQQ+QF+VAVF LR+MTKSTWDKKVEVYRKWGLSEEE+ LAFRR+PW M+ SEDKIN  MDFFVNK+GCE+SFAARRPIL+  SL
Subjt:  RFKETVERVTEMGFNPQQLQFVVAVFILRAMTKSTWDKKVEVYRKWGLSEEEILLAFRRHPWSMMRSEDKINGAMDFFVNKMGCEASFAARRPILLSLSL

Query:  KKRILPRGYVYQVLLSKGLIKKHQNLILFFESSENCFIEKFINPHKEQIPGLLELYKQKLMDSRR
        KKRILPRGYVYQVLLSKGLIK H+NL+LFFES E  FIEKFINPHKEQIPGLLELY++KLMDSRR
Subjt:  KKRILPRGYVYQVLLSKGLIKKHQNLILFFESSENCFIEKFINPHKEQIPGLLELYKQKLMDSRR

XP_016899002.1 PREDICTED: uncharacterized protein LOC103483819 isoform X2 [Cucumis melo]

2.83e-208

81.37

Show/hide

Query:  MYNLFRRTILLRPSSSVFSHGFSECPLKSLRYLSTSSDIVSSPTSAPLASNALQHKNKRKAVIALLADHGFSESQISDLDKRFPQILSANPEKSLLPKLL
        M NLFRR +LLR  SSVFSHGFSECPLKSLR+LSTSS+IVSSP SA LASN +Q KN RKA  +   +HGFSESQISD+DK+FPQILSANPEK LLPKLL
Subjt:  MYNLFRRTILLRPSSSVFSHGFSECPLKSLRYLSTSSDIVSSPTSAPLASNALQHKNKRKAVIALLADHGFSESQISDLDKRFPQILSANPEKSLLPKLL

Query:  FFQSKGLSSPEIVKLVCSFPRVLTGSLDKRIIPAFDYIQAVLGSEEKTLASIKQFAGILVKDLRISAGPNIEILKQIGVPDSNIFKYLQYQPRVFLINPV
        FFQSKGLSSPEIVKLVC +P  L  SL+KR+IPAFDYIQAV GS+EK LA+IKQFAGIL  DL+I  GPNIEILKQIGVPDSNIFKYLQY+PRVFL NP+
Subjt:  FFQSKGLSSPEIVKLVCSFPRVLTGSLDKRIIPAFDYIQAVLGSEEKTLASIKQFAGILVKDLRISAGPNIEILKQIGVPDSNIFKYLQYQPRVFLINPV

Query:  RFKETVERVTEMGFNPQQLQFVVAVFILRAMTKSTWDKKVEVYRKWGLSEEEILLAFRRHPWSMMRSEDKINGAMDFFVNKMGCEASFAARRPILLSLSL
        RFKE VER  EMGFNPQQLQF+VAVFILR+M KSTWDKKVEVYRKWGLSEEEI LAFR+HP SMMRSEDKIN AMDFFVNKMGCE+S A  RP+LLSLSL
Subjt:  RFKETVERVTEMGFNPQQLQFVVAVFILRAMTKSTWDKKVEVYRKWGLSEEEILLAFRRHPWSMMRSEDKINGAMDFFVNKMGCEASFAARRPILLSLSL

Query:  KKRILPRGYVYQVLLSKGLIKKHQNLILFFESSENCFIEKFINPHKEQIPGLLELYKQKLMDSRR
        KKRILPRGYVY+VLLSKGLI+KH+NL+LFFES E  FIEK INPH+EQIPGLLELY+QKLMDSRR
Subjt:  KKRILPRGYVYQVLLSKGLIKKHQNLILFFESSENCFIEKFINPHKEQIPGLLELYKQKLMDSRR

XP_016899003.1 PREDICTED: uncharacterized protein LOC103483819 isoform X3 [Cucumis melo]

9.89e-209

80.82

Show/hide

Query:  MYNLFRRTILLRPSSSVFSHGFSECPLKSLRYLSTSSDIVSSPTSAPLASNALQHKNKRKAVIALLADHGFSESQISDLDKRFPQILSANPEKSLLPKLL
        M NLFRR +LLR  SSVFSHGFSECPLKSLR+LSTSS+IVSSP SA LASN +Q KN RKA  +   +HGFSESQISD+DK+FPQILSANPEK LLPKLL
Subjt:  MYNLFRRTILLRPSSSVFSHGFSECPLKSLRYLSTSSDIVSSPTSAPLASNALQHKNKRKAVIALLADHGFSESQISDLDKRFPQILSANPEKSLLPKLL

Query:  FFQSKGLSSPEIVKLVCSFPRVLTGSLDKRIIPAFDYIQAVLGSEEKTLASIKQFAGILVKDLRISAGPNIEILKQIGVPDSNIFKYLQYQPRVFLINPV
        FF+SKGLSSPEI K+V SFP VL+GSL+ RIIPAFDYIQAVLGSEEKTL  IK FAGIL +DLRIS GPNIEILKQIGVPDSNIFKYLQY+PRVFL NP+
Subjt:  FFQSKGLSSPEIVKLVCSFPRVLTGSLDKRIIPAFDYIQAVLGSEEKTLASIKQFAGILVKDLRISAGPNIEILKQIGVPDSNIFKYLQYQPRVFLINPV

Query:  RFKETVERVTEMGFNPQQLQFVVAVFILRAMTKSTWDKKVEVYRKWGLSEEEILLAFRRHPWSMMRSEDKINGAMDFFVNKMGCEASFAARRPILLSLSL
        RFKETV+RVTEMGFNPQQLQFVVAVFILR++TKSTWDKKVEVYRKWGLSEEEI LAF+RHPW MM SEDKING MDFFVNK+GCE+SF A RP+L+SLSL
Subjt:  RFKETVERVTEMGFNPQQLQFVVAVFILRAMTKSTWDKKVEVYRKWGLSEEEILLAFRRHPWSMMRSEDKINGAMDFFVNKMGCEASFAARRPILLSLSL

Query:  KKRILPRGYVYQVLLSKGLIKKHQNLILFFESSENCFIEKFINPHKEQIPGLLELYKQKLMDSRR
        KKRI PRGYVYQVLL+KGLIKKH ++ +F + SE  FIEK I+PHKEQIPGLLE Y+QKLMDSRR
Subjt:  KKRILPRGYVYQVLLSKGLIKKHQNLILFFESSENCFIEKFINPHKEQIPGLLELYKQKLMDSRR

TrEMBL top hits

e value

%identity

Alignment

A0A1S4DSM8 uncharacterized protein LOC103483819 isoform X2

5.3e-164

81.37

Show/hide

Query:  MYNLFRRTILLRPSSSVFSHGFSECPLKSLRYLSTSSDIVSSPTSAPLASNALQHKNKRKAVIALLADHGFSESQISDLDKRFPQILSANPEKSLLPKLL
        M NLFRR +LLR  SSVFSHGFSECPLKSLR+LSTSS+IVSSP SA LASN +Q KN RKA  +   +HGFSESQISD+DK+FPQILSANPEK LLPKLL
Subjt:  MYNLFRRTILLRPSSSVFSHGFSECPLKSLRYLSTSSDIVSSPTSAPLASNALQHKNKRKAVIALLADHGFSESQISDLDKRFPQILSANPEKSLLPKLL

Query:  FFQSKGLSSPEIVKLVCSFPRVLTGSLDKRIIPAFDYIQAVLGSEEKTLASIKQFAGILVKDLRISAGPNIEILKQIGVPDSNIFKYLQYQPRVFLINPV
        FFQSKGLSSPEIVKLVC +P  L  SL+KR+IPAFDYIQAV GS+EK LA+IKQFAGIL  DL+I  GPNIEILKQIGVPDSNIFKYLQY+PRVFL NP+
Subjt:  FFQSKGLSSPEIVKLVCSFPRVLTGSLDKRIIPAFDYIQAVLGSEEKTLASIKQFAGILVKDLRISAGPNIEILKQIGVPDSNIFKYLQYQPRVFLINPV

Query:  RFKETVERVTEMGFNPQQLQFVVAVFILRAMTKSTWDKKVEVYRKWGLSEEEILLAFRRHPWSMMRSEDKINGAMDFFVNKMGCEASFAARRPILLSLSL
        RFKE VER  EMGFNPQQLQF+VAVFILR+M KSTWDKKVEVYRKWGLSEEEI LAFR+HP SMMRSEDKIN AMDFFVNKMGCE+S A  RP+LLSLSL
Subjt:  RFKETVERVTEMGFNPQQLQFVVAVFILRAMTKSTWDKKVEVYRKWGLSEEEILLAFRRHPWSMMRSEDKINGAMDFFVNKMGCEASFAARRPILLSLSL

Query:  KKRILPRGYVYQVLLSKGLIKKHQNLILFFESSENCFIEKFINPHKEQIPGLLELYKQKLMDSRR
        KKRILPRGYVY+VLLSKGLI+KH+NL+LFFES E  FIEK INPH+EQIPGLLELY+QKLMDSRR
Subjt:  KKRILPRGYVYQVLLSKGLIKKHQNLILFFESSENCFIEKFINPHKEQIPGLLELYKQKLMDSRR

A0A1S4DSR4 uncharacterized protein LOC103483819 isoform X3

2.4e-164

80.82

Show/hide

Query:  MYNLFRRTILLRPSSSVFSHGFSECPLKSLRYLSTSSDIVSSPTSAPLASNALQHKNKRKAVIALLADHGFSESQISDLDKRFPQILSANPEKSLLPKLL
        M NLFRR +LLR  SSVFSHGFSECPLKSLR+LSTSS+IVSSP SA LASN +Q KN RKA  +   +HGFSESQISD+DK+FPQILSANPEK LLPKLL
Subjt:  MYNLFRRTILLRPSSSVFSHGFSECPLKSLRYLSTSSDIVSSPTSAPLASNALQHKNKRKAVIALLADHGFSESQISDLDKRFPQILSANPEKSLLPKLL

Query:  FFQSKGLSSPEIVKLVCSFPRVLTGSLDKRIIPAFDYIQAVLGSEEKTLASIKQFAGILVKDLRISAGPNIEILKQIGVPDSNIFKYLQYQPRVFLINPV
        FF+SKGLSSPEI K+V SFP VL+GSL+ RIIPAFDYIQAVLGSEEKTL  IK FAGIL +DLRIS GPNIEILKQIGVPDSNIFKYLQY+PRVFL NP+
Subjt:  FFQSKGLSSPEIVKLVCSFPRVLTGSLDKRIIPAFDYIQAVLGSEEKTLASIKQFAGILVKDLRISAGPNIEILKQIGVPDSNIFKYLQYQPRVFLINPV

Query:  RFKETVERVTEMGFNPQQLQFVVAVFILRAMTKSTWDKKVEVYRKWGLSEEEILLAFRRHPWSMMRSEDKINGAMDFFVNKMGCEASFAARRPILLSLSL
        RFKETV+RVTEMGFNPQQLQFVVAVFILR++TKSTWDKKVEVYRKWGLSEEEI LAF+RHPW MM SEDKING MDFFVNK+GCE+SF A RP+L+SLSL
Subjt:  RFKETVERVTEMGFNPQQLQFVVAVFILRAMTKSTWDKKVEVYRKWGLSEEEILLAFRRHPWSMMRSEDKINGAMDFFVNKMGCEASFAARRPILLSLSL

Query:  KKRILPRGYVYQVLLSKGLIKKHQNLILFFESSENCFIEKFINPHKEQIPGLLELYKQKLMDSRR
        KKRI PRGYVYQVLL+KGLIKKH ++ +F + SE  FIEK I+PHKEQIPGLLE Y+QKLMDSRR
Subjt:  KKRILPRGYVYQVLLSKGLIKKHQNLILFFESSENCFIEKFINPHKEQIPGLLELYKQKLMDSRR

A0A5A7U0V4 Transcription termination factor MTEF1

6.2e-197

100

Show/hide

Query:  MYNLFRRTILLRPSSSVFSHGFSECPLKSLRYLSTSSDIVSSPTSAPLASNALQHKNKRKAVIALLADHGFSESQISDLDKRFPQILSANPEKSLLPKLL
        MYNLFRRTILLRPSSSVFSHGFSECPLKSLRYLSTSSDIVSSPTSAPLASNALQHKNKRKAVIALLADHGFSESQISDLDKRFPQILSANPEKSLLPKLL
Subjt:  MYNLFRRTILLRPSSSVFSHGFSECPLKSLRYLSTSSDIVSSPTSAPLASNALQHKNKRKAVIALLADHGFSESQISDLDKRFPQILSANPEKSLLPKLL

Query:  FFQSKGLSSPEIVKLVCSFPRVLTGSLDKRIIPAFDYIQAVLGSEEKTLASIKQFAGILVKDLRISAGPNIEILKQIGVPDSNIFKYLQYQPRVFLINPV
        FFQSKGLSSPEIVKLVCSFPRVLTGSLDKRIIPAFDYIQAVLGSEEKTLASIKQFAGILVKDLRISAGPNIEILKQIGVPDSNIFKYLQYQPRVFLINPV
Subjt:  FFQSKGLSSPEIVKLVCSFPRVLTGSLDKRIIPAFDYIQAVLGSEEKTLASIKQFAGILVKDLRISAGPNIEILKQIGVPDSNIFKYLQYQPRVFLINPV

Query:  RFKETVERVTEMGFNPQQLQFVVAVFILRAMTKSTWDKKVEVYRKWGLSEEEILLAFRRHPWSMMRSEDKINGAMDFFVNKMGCEASFAARRPILLSLSL
        RFKETVERVTEMGFNPQQLQFVVAVFILRAMTKSTWDKKVEVYRKWGLSEEEILLAFRRHPWSMMRSEDKINGAMDFFVNKMGCEASFAARRPILLSLSL
Subjt:  RFKETVERVTEMGFNPQQLQFVVAVFILRAMTKSTWDKKVEVYRKWGLSEEEILLAFRRHPWSMMRSEDKINGAMDFFVNKMGCEASFAARRPILLSLSL

Query:  KKRILPRGYVYQVLLSKGLIKKHQNLILFFESSENCFIEKFINPHKEQIPGLLEL
        KKRILPRGYVYQVLLSKGLIKKHQNLILFFESSENCFIEKFINPHKEQIPGLLEL
Subjt:  KKRILPRGYVYQVLLSKGLIKKHQNLILFFESSENCFIEKFINPHKEQIPGLLEL

A0A5A7U0W3 Transcription termination factor MTEF1

7.7e-163

81.1

Show/hide

Query:  MYNLFRRTILLRPSSSVFSHGFSECPLKSLRYLSTSSDIVSSPTSAPLASNALQHKNKRKAVIALLADHGFSESQISDLDKRFPQILSANPEKSLLPKLL
        M NLFR  +LL+  S VFS GFS  PLKS+R+LSTSS+IVSS  SAPLASNA Q KNKRKAVIALLAD+G SESQIS LDKR+PQILSANPEK+LLPKLL
Subjt:  MYNLFRRTILLRPSSSVFSHGFSECPLKSLRYLSTSSDIVSSPTSAPLASNALQHKNKRKAVIALLADHGFSESQISDLDKRFPQILSANPEKSLLPKLL

Query:  FFQSKGLSSPEIVKLVCSFPRVLTGSLDKRIIPAFDYIQAVLGSEEKTLASIKQFAGILVKDLRISAGPNIEILKQIGVPDSNIFKYLQYQPRVFLINPV
        FF+SKGLSSPEI K+VCSFPRV  GSLDKRIIP F YIQA+LGSEEKTL +IK+FAGIL  DLRISAGP+IEILKQ GVPDSNI KYLQ+QPR+FL NP+
Subjt:  FFQSKGLSSPEIVKLVCSFPRVLTGSLDKRIIPAFDYIQAVLGSEEKTLASIKQFAGILVKDLRISAGPNIEILKQIGVPDSNIFKYLQYQPRVFLINPV

Query:  RFKETVERVTEMGFNPQQLQFVVAVFILRAMTKSTWDKKVEVYRKWGLSEEEILLAFRRHPWSMMRSEDKINGAMDFFVNKMGCEASFAARRPILLSLSL
        RFKE+VERVTEMGFNPQQ+QF+VAVF LR+MTKSTWDKKVEVYRKWGLSEEE+ LAFRR+PW M+ SEDKIN  MDFFVNK+GCE+SFAARRPIL+  SL
Subjt:  RFKETVERVTEMGFNPQQLQFVVAVFILRAMTKSTWDKKVEVYRKWGLSEEEILLAFRRHPWSMMRSEDKINGAMDFFVNKMGCEASFAARRPILLSLSL

Query:  KKRILPRGYVYQVLLSKGLIKKHQNLILFFESSENCFIEKFINPHKEQIPGLLELYKQKLMDSRR
        KKRILPRGYVYQVLLSKGLIK H+NL+LFFES E  FIEKFINPHKEQIPGLLELY++KLMDSRR
Subjt:  KKRILPRGYVYQVLLSKGLIKKHQNLILFFESSENCFIEKFINPHKEQIPGLLELYKQKLMDSRR

A0A5A7U7J7 Transcription termination factor MTEF1

2.0e-166

83.56

Show/hide

Query:  MYNLFRRTILLRPSSSVFSHGFSECPLKSLRYLSTSSDIVSSPTSAPLASNALQHKNKRKAVIALLADHGFSESQISDLDKRFPQILSANPEKSLLPKLL
        M N+FRR +LLR  S VF  GFS+ PLKSLRYLSTSS+IVSSP SAPLASNA+Q KNKRKAVIALLADHGFSESQIS LDKR+PQILSANPEK LLPKLL
Subjt:  MYNLFRRTILLRPSSSVFSHGFSECPLKSLRYLSTSSDIVSSPTSAPLASNALQHKNKRKAVIALLADHGFSESQISDLDKRFPQILSANPEKSLLPKLL

Query:  FFQSKGLSSPEIVKLVCSFPRVLTGSLDKRIIPAFDYIQAVLGSEEKTLASIKQFAGILVKDLRISAGPNIEILKQIGVPDSNIFKYLQYQPRVFLINPV
        FFQSKGLSSPEI KLVCSFPRVL GSLD RIIPAFDYIQAVLGSEEKTLA IK F  IL  DLRIS GPNIEILKQIGVPDSNI KY QYQPRVF  N +
Subjt:  FFQSKGLSSPEIVKLVCSFPRVLTGSLDKRIIPAFDYIQAVLGSEEKTLASIKQFAGILVKDLRISAGPNIEILKQIGVPDSNIFKYLQYQPRVFLINPV

Query:  RFKETVERVTEMGFNPQQLQFVVAVFILRAMTKSTWDKKVEVYRKWGLSEEEILLAFRRHPWSMMRSEDKINGAMDFFVNKMGCEASFAARRPILLSLSL
        RFKETVERVTEMGFNPQ+LQF+VAVF LRAMTKSTWDKKVEVYRKWGLSEEEI LAF+RHPW MM SEDKINGAMDFFVNK+GCE+SF ARRP L+SLSL
Subjt:  RFKETVERVTEMGFNPQQLQFVVAVFILRAMTKSTWDKKVEVYRKWGLSEEEILLAFRRHPWSMMRSEDKINGAMDFFVNKMGCEASFAARRPILLSLSL

Query:  KKRILPRGYVYQVLLSKGLIKKHQNLILFFESSENCFIEKFINPHKEQIPGLLELYKQKLMDSRR
        KKR+ PRGYVYQVLL KGLIKK  N+ LF  SSEN FI+KFINPHKE+IPGLLE Y+QKLMDSRR
Subjt:  KKRILPRGYVYQVLLSKGLIKKHQNLILFFESSENCFIEKFINPHKEQIPGLLELYKQKLMDSRR

SwissProt top hits

e value

%identity

Alignment

Q84X53 Transcription termination factor MTEF1, chloroplastic

2.2e-05

26.12

Show/hide

Query:  AVIALLADHGFSESQISDLDKRFPQILSANPEKSLLPKLLFFQSK-GLSSPEIVKLVCSFPRVLTGSLDKRIIPAFDYIQAVLGSEEKTLASIKQFAGIL
        +V  LL+  G S   +  +   FP +L+++PE  +LP L F  ++  +S  +I K +   PR+L  S+D ++ PA  +++ +      T+ S  +   +L
Subjt:  AVIALLADHGFSESQISDLDKRFPQILSANPEKSLLPKLLFFQSK-GLSSPEIVKLVCSFPRVLTGSLDKRIIPAFDYIQAVLGSEEKTLASIKQFAGIL

Query:  VKDLRISAGPNIEILKQ-IGVPDSNIFKYLQYQP
        V ++  +  P IE L++ +G     + K +   P
Subjt:  VKDLRISAGPNIEILKQ-IGVPDSNIFKYLQYQP

Q9SZL6 Transcription termination factor MTERF6, chloroplastic/mitochondrial

2.6e-06

21.97

Show/hide

Query:  VIALLADHGFSESQISDLDKRFPQILSANPEKSLLPKLLFFQSKGLSSPEIVKLVCSFPRVLTGSL----------------------------------
        ++  L+  G +  +++    +FP ILS + E+ L P L FFQ+ G+   ++ K++   PR+++ S+                                  
Subjt:  VIALLADHGFSESQISDLDKRFPQILSANPEKSLLPKLLFFQSKGLSSPEIVKLVCSFPRVLTGSL----------------------------------

Query:  ---DKRIIPAFDYIQAVLG-SEEKTLASIKQFAGILVKDLRISAGPNIEILKQIGVPDSNIFKYLQYQPRVFL
           DKR+ P  +++++ +G SE+   + +  F  +L +D+     PN + LK+ G  DS I   +   P++ +
Subjt:  ---DKRIIPAFDYIQAVLG-SEEKTLASIKQFAGILVKDLRISAGPNIEILKQIGVPDSNIFKYLQYQPRVFL

Arabidopsis top hits

e value

%identity

Alignment

AT1G21150.1 Mitochondrial transcription termination factor family protein

1.7e-50

34.75

Show/hide

Query:  LQHKNKRKAVIALLADHGFSESQISDLDKRFPQILSANPEKSLLPKLLFFQSKGLSSPEIVKLVCSFPRVLTGSLDKRIIPAFDYIQAVLGSEEKTLASI
        L    K  +V+AL  DHGF+  QI+ + K FP++LS +PE  + PKL+FF S G S+ +  K++ S P++L+ SL KR+IP +D ++++L  EE  +  +
Subjt:  LQHKNKRKAVIALLADHGFSESQISDLDKRFPQILSANPEKSLLPKLLFFQSKGLSSPEIVKLVCSFPRVLTGSLDKRIIPAFDYIQAVLGSEEKTLASI

Query:  KQFAGILVKDLRIS--AGPNIEILKQIGVPDSNIFKYLQYQPRVFLINPVRFKETVERVTEMGFNPQQLQFVVAVFILRAMTKSTWDKKVEVYRKWGLSE
        K+  GI    L+I+      + I +++GVPD +I   +Q  P  F     RF E + RV   GF+P++  FV A+      ++S  ++K ++++ +G S+
Subjt:  KQFAGILVKDLRIS--AGPNIEILKQIGVPDSNIFKYLQYQPRVFLINPVRFKETVERVTEMGFNPQQLQFVVAVFILRAMTKSTWDKKVEVYRKWGLSE

Query:  EEILLAFRRHPWSMMRSEDKINGAMDFFVNKMGCEASFAARRPILLSLSLKKRILPRGYVYQVLLSKGLIKKHQ-NLILFFESSENCFIEKFINPHKEQI
        E+ + A  R P  +  S++KI   +++ VN +G +A     RP++LSLS++KRI PR  V  +LLSKGL+KK   N     +   + F++KF+  +++++
Subjt:  EEILLAFRRHPWSMMRSEDKINGAMDFFVNKMGCEASFAARRPILLSLSLKKRILPRGYVYQVLLSKGLIKKHQ-NLILFFESSENCFIEKFINPHKEQI

Query:  PGLLE
        P L++
Subjt:  PGLLE

AT1G61970.1 Mitochondrial transcription termination factor family protein

1.2e-35

27.89

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Query:  PSSSVFSHGFSECPLK---------SLRYLSTSSDIVSSPTSAPLASNALQHKNKRKAVIALLADHGFSESQISDLDKRFPQILSANPEKSLLPKLLFFQ
        P+S+ FS   + C            ++ YL  S  + +    +     + + KN   +V+ LL  HGF+ SQIS + + +PQ+L A+ EKSL PKL F Q
Subjt:  PSSSVFSHGFSECPLK---------SLRYLSTSSDIVSSPTSAPLASNALQHKNKRKAVIALLADHGFSESQISDLDKRFPQILSANPEKSLLPKLLFFQ

Query:  SKGLSSPEIVKLVCSFPRVLTGSLDKRIIPAFDYIQAVL----GSEEKTLASIKQFAGILVKDLRISAGPNIEILKQIGVPDSNIFKYL--QYQPRVFLI
        S+G SS EI ++V S P +L     K I   +D+I+  L       EK   S+ Q  G L   +R     N+ +L+++G+P   +F  L    QP   + 
Subjt:  SKGLSSPEIVKLVCSFPRVLTGSLDKRIIPAFDYIQAVL----GSEEKTLASIKQFAGILVKDLRISAGPNIEILKQIGVPDSNIFKYL--QYQPRVFLI

Query:  NPVRFKETVERVTEMGFNPQQLQFVVAVFILRAMTKSTWDKKVEVYRKWGLSEEEILLAFRRHPWSMMRSEDK---------------------------
           +F+ET+++V EMGF+P   +FV A+ ++  M + T ++KV +Y+  G    ++  +F++ P S+  SE K                           
Subjt:  NPVRFKETVERVTEMGFNPQQLQFVVAVFILRAMTKSTWDKKVEVYRKWGLSEEEILLAFRRHPWSMMRSEDK---------------------------

Query:  --------INGAMDFFVNKMGCEASFAARRPILLSLSLKKRILPRGYVYQVLLSKGLIKKH-QNLILFFESSENCFIEKFINPH--KEQIPGLLELYK
                +    +F V KM          P +   SL+KRI+PRG V + L+SKGL++    ++      ++  F+ +++  H  K+ +  L+ +Y+
Subjt:  --------INGAMDFFVNKMGCEASFAARRPILLSLSLKKRILPRGYVYQVLLSKGLIKKH-QNLILFFESSENCFIEKFINPH--KEQIPGLLELYK

AT1G61970.2 Mitochondrial transcription termination factor family protein

1.2e-35

27.89

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Query:  PSSSVFSHGFSECPLK---------SLRYLSTSSDIVSSPTSAPLASNALQHKNKRKAVIALLADHGFSESQISDLDKRFPQILSANPEKSLLPKLLFFQ
        P+S+ FS   + C            ++ YL  S  + +    +     + + KN   +V+ LL  HGF+ SQIS + + +PQ+L A+ EKSL PKL F Q
Subjt:  PSSSVFSHGFSECPLK---------SLRYLSTSSDIVSSPTSAPLASNALQHKNKRKAVIALLADHGFSESQISDLDKRFPQILSANPEKSLLPKLLFFQ

Query:  SKGLSSPEIVKLVCSFPRVLTGSLDKRIIPAFDYIQAVL----GSEEKTLASIKQFAGILVKDLRISAGPNIEILKQIGVPDSNIFKYL--QYQPRVFLI
        S+G SS EI ++V S P +L     K I   +D+I+  L       EK   S+ Q  G L   +R     N+ +L+++G+P   +F  L    QP   + 
Subjt:  SKGLSSPEIVKLVCSFPRVLTGSLDKRIIPAFDYIQAVL----GSEEKTLASIKQFAGILVKDLRISAGPNIEILKQIGVPDSNIFKYL--QYQPRVFLI

Query:  NPVRFKETVERVTEMGFNPQQLQFVVAVFILRAMTKSTWDKKVEVYRKWGLSEEEILLAFRRHPWSMMRSEDK---------------------------
           +F+ET+++V EMGF+P   +FV A+ ++  M + T ++KV +Y+  G    ++  +F++ P S+  SE K                           
Subjt:  NPVRFKETVERVTEMGFNPQQLQFVVAVFILRAMTKSTWDKKVEVYRKWGLSEEEILLAFRRHPWSMMRSEDK---------------------------

Query:  --------INGAMDFFVNKMGCEASFAARRPILLSLSLKKRILPRGYVYQVLLSKGLIKKH-QNLILFFESSENCFIEKFINPH--KEQIPGLLELYK
                +    +F V KM          P +   SL+KRI+PRG V + L+SKGL++    ++      ++  F+ +++  H  K+ +  L+ +Y+
Subjt:  --------INGAMDFFVNKMGCEASFAARRPILLSLSLKKRILPRGYVYQVLLSKGLIKKH-QNLILFFESSENCFIEKFINPH--KEQIPGLLELYK

AT5G07900.1 Mitochondrial transcription termination factor family protein

1.1e-60

39.27

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Query:  SLRYLSTSSDIVSSPTSAPLASN--ALQHKNKRKAVIALLADHGFSESQISDLDKRFPQILSANPEKSLLPKLLFFQSKGLSSPEIVKLVCSFPRVLTGS
        +L YL  S  +  SP SA +AS    L    +   V+ LL DHGF+ +QIS L K+ P +L AN E  LLPKL FF S G+S   + + + S P +LT S
Subjt:  SLRYLSTSSDIVSSPTSAPLASN--ALQHKNKRKAVIALLADHGFSESQISDLDKRFPQILSANPEKSLLPKLLFFQSKGLSSPEIVKLVCSFPRVLTGS

Query:  LDKRIIPAFDYIQAVLGSEEKTLASIKQFAGILVKDLRISAGPNIEILKQIGVPDSNIFKYLQYQPRVFLINPVRFKETVERVTEMGFNPQQLQFVVAVF
        L  ++IP+++++++VL S+EK +A++++   + ++D   +  PNI  + + GVP+  I   L + P   +     F+   ++  EMGFNPQ+  FV+A+ 
Subjt:  LDKRIIPAFDYIQAVLGSEEKTLASIKQFAGILVKDLRISAGPNIEILKQIGVPDSNIFKYLQYQPRVFLINPVRFKETVERVTEMGFNPQQLQFVVAVF

Query:  ILRAM-TKSTWDKKVEVYRKWGLSEEEILLAFRRHPWSMMRSEDKINGAMDFFVNKMGCEASFAARRPILLSLSLKKRILPRGYVYQVLLSKGLIKKHQN
         L     KS WDK  EVY++WG SE++I+ AF++HP  MM SE KIN  M++FVN+M       A+ P++L  SL+KRI+PR  V +VL+S GL+K+  +
Subjt:  ILRAM-TKSTWDKKVEVYRKWGLSEEEILLAFRRHPWSMMRSEDKINGAMDFFVNKMGCEASFAARRPILLSLSLKKRILPRGYVYQVLLSKGLIKKHQN

Query:  LILFFESSENCFIEKFINPHKEQIPGLLELY
        L       E  F+EK +  ++E++P L+ LY
Subjt:  LILFFESSENCFIEKFINPHKEQIPGLLELY

AT5G64950.1 Mitochondrial transcription termination factor family protein

1.3e-40

32.05

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Query:  LQHKNKRKAVIALLADHGFSESQISDLDKRFPQILSANPEKSLLPKLLFFQSKGLSSPEIVKLVCSFPRVLTGSLDKRIIPAFDYIQAVLGSEEKTLASI
        L+   + ++VI +L  + FS++QI    +  P+++  N EK L PKL FF+  G +   + K V     V+  SL K++IP  + +++++  + + L  I
Subjt:  LQHKNKRKAVIALLADHGFSESQISDLDKRFPQILSANPEKSLLPKLLFFQSKGLSSPEIVKLVCSFPRVLTGSLDKRIIPAFDYIQAVLGSEEKTLASI

Query:  KQFAG--ILVKDLRISAGPNIEILKQIGVPDSNIFKYLQYQPRVFLINPVRFKETVERVTEMGFNPQQLQFVVAVFILRAMTKSTWDKKVEVYRKWGLSE
            G  +L +D  +   PNI  L+  G+  S +   L+ QPR+F ++  + +  V R  ++GF       V AV  L ++++ T+D+KV+++   G SE
Subjt:  KQFAG--ILVKDLRISAGPNIEILKQIGVPDSNIFKYLQYQPRVFLINPVRFKETVERVTEMGFNPQQLQFVVAVFILRAMTKSTWDKKVEVYRKWGLSE

Query:  EEILLAFRRHPWSMMRSEDKINGAMDFFVNKMGCEASFAARRPILLSLSLKKRILPRGYVYQVLLSKGLI----KKHQNLILFFESSENCFIEKFINPHK
        +EI    RR P  +  SEDK+    +F++ +MG E    A+RP +LS +L+KR++PR  V Q+L  KGL+    KK +N++   E +E  F+EK++    
Subjt:  EEILLAFRRHPWSMMRSEDKINGAMDFFVNKMGCEASFAARRPILLSLSLKKRILPRGYVYQVLLSKGLI----KKHQNLILFFESSENCFIEKFINPHK

Query:  EQI-PGLLELYK
        ++I   LL  YK
Subjt:  EQI-PGLLELYK

Sequences

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CDS sequence

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ATGTATAACTTGTTTCGCAGAACCATTCTACTTAGACCTTCATCGTCAGTCTTTTCTCACGGATTTTCCGAATGTCCGTTGAAATCTCTCAGATACTTATCGACTTCTTC
TGATATTGTATCATCTCCTACATCTGCTCCGTTGGCTTCTAATGCTCTTCAGCACAAGAATAAACGGAAGGCTGTAATTGCGTTACTTGCGGATCATGGATTCTCTGAAT
CACAAATCTCTGACCTTGACAAGAGGTTTCCTCAAATTCTTTCTGCGAACCCCGAGAAAAGTCTATTGCCCAAACTGTTGTTTTTTCAATCTAAAGGTCTTTCTTCCCCA
GAGATTGTCAAATTAGTATGTTCATTTCCTCGTGTCTTAACAGGAAGTTTAGACAAACGAATTATCCCAGCCTTCGATTACATTCAAGCGGTGCTTGGAAGTGAGGAGAA
GACTCTCGCTTCTATAAAACAGTTTGCGGGTATTCTCGTGAAGGATCTTCGAATTTCAGCTGGTCCCAATATTGAAATTCTGAAACAAATTGGAGTGCCGGATTCAAATA
TTTTCAAATATCTTCAGTACCAGCCTAGAGTGTTCTTGATAAATCCCGTCCGATTCAAGGAGACTGTAGAGAGAGTTACGGAAATGGGATTCAACCCTCAACAATTGCAG
TTTGTTGTTGCTGTTTTTATTCTGCGAGCAATGACCAAATCTACATGGGATAAGAAGGTTGAAGTTTATAGGAAATGGGGATTGTCTGAAGAAGAGATCCTTTTAGCTTT
TAGAAGGCATCCATGGAGTATGATGCGTTCTGAGGATAAGATTAATGGTGCAATGGATTTTTTTGTCAACAAAATGGGATGCGAAGCATCTTTCGCTGCTAGAAGACCAA
TTTTACTTTCACTTAGTTTGAAGAAGAGGATTTTGCCTAGAGGCTATGTTTATCAAGTGTTGCTGTCAAAGGGTTTGATTAAGAAACACCAGAATCTTATTTTGTTCTTT
GAGTCTTCTGAAAACTGTTTCATAGAAAAATTCATTAACCCTCATAAGGAGCAGATTCCTGGATTGTTGGAGTTGTATAAACAGAAATTAATGGATTCTAGAAGATGA

mRNA sequence

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Protein sequence

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MYNLFRRTILLRPSSSVFSHGFSECPLKSLRYLSTSSDIVSSPTSAPLASNALQHKNKRKAVIALLADHGFSESQISDLDKRFPQILSANPEKSLLPKLLFFQSKGLSSP
EIVKLVCSFPRVLTGSLDKRIIPAFDYIQAVLGSEEKTLASIKQFAGILVKDLRISAGPNIEILKQIGVPDSNIFKYLQYQPRVFLINPVRFKETVERVTEMGFNPQQLQ
FVVAVFILRAMTKSTWDKKVEVYRKWGLSEEEILLAFRRHPWSMMRSEDKINGAMDFFVNKMGCEASFAARRPILLSLSLKKRILPRGYVYQVLLSKGLIKKHQNLILFF
ESSENCFIEKFINPHKEQIPGLLELYKQKLMDSRR

IVF0002631 (gene) of Melon (IVF77) v1 genome