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IVF0002658 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0002658
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionPMD domain-containing protein
Genome locationchr01:26140980..26141564
RNA-Seq ExpressionIVF0002658
SyntenyIVF0002658
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0058006.1 uncharacterized protein E6C27_scaffold274G003110 [Cucumis melo var. makuwa]3.32e-11687.23Show/hide
Query:  MVYFTERFLSGVRYLVILYDRNQSKEDGLSLIVEKPWAGAFADHWPRLDNNSVLPRLSVEICLFEGKSAWVLQSSIHNEAPNFDRALTLEQRLIEGQTRW
        MVYFTERFLSGVR+L+ILY++NQ +EDGLSLIVEKPWA AFADHWPRLDNNSVLPRLSVEI L EGKSAWVLQSSIHNEAPN  RALTL QRLIEGQTRW
Subjt:  MVYFTERFLSGVRYLVILYDRNQSKEDGLSLIVEKPWAGAFADHWPRLDNNSVLPRLSVEICLFEGKSAWVLQSSIHNEAPNFDRALTLEQRLIEGQTRW

Query:  GNVTKVPGEFCFIDCYWEWLEFVVGRKTRLLYNTRLYGVVTASLYTYNRNSDVVRAFCEAWCPSTNTLHTMAGELSISLWDLWFFGGL
        G +TKVPGEF F DCYWEWLE VVGR TRLLY+TRLYG VTASLYTY+RNSDVVR FCEAWCPSTNTLHTMAGELSISLWDLW FG L
Subjt:  GNVTKVPGEFCFIDCYWEWLEFVVGRKTRLLYNTRLYGVVTASLYTYNRNSDVVRAFCEAWCPSTNTLHTMAGELSISLWDLWFFGGL

KAA0059654.1 putative mitochondrial protein [Cucumis melo var. makuwa]7.02e-134100Show/hide
Query:  ERFLSGVRYLVILYDRNQSKEDGLSLIVEKPWAGAFADHWPRLDNNSVLPRLSVEICLFEGKSAWVLQSSIHNEAPNFDRALTLEQRLIEGQTRWGNVTK
        ERFLSGVRYLVILYDRNQSKEDGLSLIVEKPWAGAFADHWPRLDNNSVLPRLSVEICLFEGKSAWVLQSSIHNEAPNFDRALTLEQRLIEGQTRWGNVTK
Subjt:  ERFLSGVRYLVILYDRNQSKEDGLSLIVEKPWAGAFADHWPRLDNNSVLPRLSVEICLFEGKSAWVLQSSIHNEAPNFDRALTLEQRLIEGQTRWGNVTK

Query:  VPGEFCFIDCYWEWLEFVVGRKTRLLYNTRLYGVVTASLYTYNRNSDVVRAFCEAWCPSTNTLHTMAGELSISLWDLWFFGGLLRMTLK
        VPGEFCFIDCYWEWLEFVVGRKTRLLYNTRLYGVVTASLYTYNRNSDVVRAFCEAWCPSTNTLHTMAGELSISLWDLWFFGGLLRMTLK
Subjt:  VPGEFCFIDCYWEWLEFVVGRKTRLLYNTRLYGVVTASLYTYNRNSDVVRAFCEAWCPSTNTLHTMAGELSISLWDLWFFGGLLRMTLK

KAA0061098.1 putative mitochondrial protein [Cucumis melo var. makuwa]1.49e-11886.77Show/hide
Query:  MVYFTERFLSGVRYLVILYDRNQSKEDGLSLIVEKPWAGAFADHWPRLDNNSVLPRLSVEICLFEGKSAWVLQSSIHNEAPNFDRALTLEQRLIEGQTRW
        MVYFTERFLSGVR+LVIL DRNQS+EDGLSLIVEKPWAG FADHWPRLDNNSVL RLSVEI L EGKSAWVLQS IH+EAPN  RALT  QRLIEGQT W
Subjt:  MVYFTERFLSGVRYLVILYDRNQSKEDGLSLIVEKPWAGAFADHWPRLDNNSVLPRLSVEICLFEGKSAWVLQSSIHNEAPNFDRALTLEQRLIEGQTRW

Query:  GNVTKVPGEFCFIDCYWEWLEFVVGRKTRLLYNTRLYGVVTASLYTYNRNSDVVRAFCEAWCPSTNTLHTMAGELSISLWDLWFFGGLL
        G VTKVPGEFCF DCYWEWLE VVGR TRLLY+T LYG VTASLYTY+RN+DVVRAFCEAWCPSTNTLHTMAGELSI LWDLW FGGLL
Subjt:  GNVTKVPGEFCFIDCYWEWLEFVVGRKTRLLYNTRLYGVVTASLYTYNRNSDVVRAFCEAWCPSTNTLHTMAGELSISLWDLWFFGGLL

TYK08186.1 hypothetical protein E5676_scaffold886G00810 [Cucumis melo var. makuwa]1.97e-133100Show/hide
Query:  ERFLSGVRYLVILYDRNQSKEDGLSLIVEKPWAGAFADHWPRLDNNSVLPRLSVEICLFEGKSAWVLQSSIHNEAPNFDRALTLEQRLIEGQTRWGNVTK
        ERFLSGVRYLVILYDRNQSKEDGLSLIVEKPWAGAFADHWPRLDNNSVLPRLSVEICLFEGKSAWVLQSSIHNEAPNFDRALTLEQRLIEGQTRWGNVTK
Subjt:  ERFLSGVRYLVILYDRNQSKEDGLSLIVEKPWAGAFADHWPRLDNNSVLPRLSVEICLFEGKSAWVLQSSIHNEAPNFDRALTLEQRLIEGQTRWGNVTK

Query:  VPGEFCFIDCYWEWLEFVVGRKTRLLYNTRLYGVVTASLYTYNRNSDVVRAFCEAWCPSTNTLHTMAGELSISLWDLWFFGGLLRMTLK
        VPGEFCFIDCYWEWLEFVVGRKTRLLYNTRLYGVVTASLYTYNRNSDVVRAFCEAWCPSTNTLHTMAGELSISLWDLWFFGGLLRMTLK
Subjt:  VPGEFCFIDCYWEWLEFVVGRKTRLLYNTRLYGVVTASLYTYNRNSDVVRAFCEAWCPSTNTLHTMAGELSISLWDLWFFGGLLRMTLK

TYK20969.1 hypothetical protein E5676_scaffold18270G00010 [Cucumis melo var. makuwa]7.00e-11989.36Show/hide
Query:  MVYFTERFLSGVRYLVILYDRNQSKEDGLSLIVEKPWAGAFADHWPRLDNNSVLPRLSVEICLFEGKSAWVLQSSIHNEAPNFDRALTLEQRLIEGQTRW
        MVYFTERFLSGVR+LVIL DRNQ +EDGLSLIVEKPWAGAFA+HWPRLDNNSVLPRLSVE+ L EGKSAWVLQSSIH EAPN  RALTL QRLIEGQTRW
Subjt:  MVYFTERFLSGVRYLVILYDRNQSKEDGLSLIVEKPWAGAFADHWPRLDNNSVLPRLSVEICLFEGKSAWVLQSSIHNEAPNFDRALTLEQRLIEGQTRW

Query:  GNVTKVPGEFCFIDCYWEWLEFVVGRKTRLLYNTRLYGVVTASLYTYNRNSDVVRAFCEAWCPSTNTLHTMAGELSISLWDLWFFGGL
        G VTKVPGEFCFIDCYWEWLE VVGR TRLLY+TRLYG VTASLYTY+ NSDVVRAFCEAWCPSTNTLHTMAGELSISLWDLW FGGL
Subjt:  GNVTKVPGEFCFIDCYWEWLEFVVGRKTRLLYNTRLYGVVTASLYTYNRNSDVVRAFCEAWCPSTNTLHTMAGELSISLWDLWFFGGL

TrEMBL top hitse value%identityAlignment
A0A5A7TX42 Uncharacterized protein5.1e-9790.43Show/hide
Query:  MVYFTERFLSGVRYLVILYDRNQSKEDGLSLIVEKPWAGAFADHWPRLDNNSVLPRLSVEICLFEGKSAWVLQSSIHNEAPNFDRALTLEQRLIEGQTRW
        MVYFTERFLSGVR+LVIL DRNQ +EDGLSLIVEKPWAGAFADHWPRLDNNSVLPRLSVE+ L EGKSAWVLQSSIHNEAPN  RALTL QRLIEGQTRW
Subjt:  MVYFTERFLSGVRYLVILYDRNQSKEDGLSLIVEKPWAGAFADHWPRLDNNSVLPRLSVEICLFEGKSAWVLQSSIHNEAPNFDRALTLEQRLIEGQTRW

Query:  GNVTKVPGEFCFIDCYWEWLEFVVGRKTRLLYNTRLYGVVTASLYTYNRNSDVVRAFCEAWCPSTNTLHTMAGELSISLWDLWFFGGL
        G VTKVPGEFCF DCYWEWLE VVGR TRLLY+TRLYG VTASLYTY+RNSDVVRAFCEAWCPSTNTLHTMAGELSISLWDLW FGGL
Subjt:  GNVTKVPGEFCFIDCYWEWLEFVVGRKTRLLYNTRLYGVVTASLYTYNRNSDVVRAFCEAWCPSTNTLHTMAGELSISLWDLWFFGGL

A0A5A7U8X8 PMD domain-containing protein4.8e-9589.36Show/hide
Query:  MVYFTERFLSGVRYLVILYDRNQSKEDGLSLIVEKPWAGAFADHWPRLDNNSVLPRLSVEICLFEGKSAWVLQSSIHNEAPNFDRALTLEQRLIEGQTRW
        MVYFTERFLSGVR+LVIL DRNQ +EDGLSLIVEKPWAGAFA+HWPRLDNNSVLPRLSVE+ L EGKSAWVLQSSIH EAPN  RALTL QRLIEGQTRW
Subjt:  MVYFTERFLSGVRYLVILYDRNQSKEDGLSLIVEKPWAGAFADHWPRLDNNSVLPRLSVEICLFEGKSAWVLQSSIHNEAPNFDRALTLEQRLIEGQTRW

Query:  GNVTKVPGEFCFIDCYWEWLEFVVGRKTRLLYNTRLYGVVTASLYTYNRNSDVVRAFCEAWCPSTNTLHTMAGELSISLWDLWFFGGL
        G VTKVPGEFCFIDCYWEWLE VVGR TRLLY+TRLYG VTASLYTY+ NSDVVRAFCEAWCPSTNTLHTMAGELSISLWDLW FGGL
Subjt:  GNVTKVPGEFCFIDCYWEWLEFVVGRKTRLLYNTRLYGVVTASLYTYNRNSDVVRAFCEAWCPSTNTLHTMAGELSISLWDLWFFGGL

A0A5A7UX29 Putative mitochondrial protein5.2e-110100Show/hide
Query:  ERFLSGVRYLVILYDRNQSKEDGLSLIVEKPWAGAFADHWPRLDNNSVLPRLSVEICLFEGKSAWVLQSSIHNEAPNFDRALTLEQRLIEGQTRWGNVTK
        ERFLSGVRYLVILYDRNQSKEDGLSLIVEKPWAGAFADHWPRLDNNSVLPRLSVEICLFEGKSAWVLQSSIHNEAPNFDRALTLEQRLIEGQTRWGNVTK
Subjt:  ERFLSGVRYLVILYDRNQSKEDGLSLIVEKPWAGAFADHWPRLDNNSVLPRLSVEICLFEGKSAWVLQSSIHNEAPNFDRALTLEQRLIEGQTRWGNVTK

Query:  VPGEFCFIDCYWEWLEFVVGRKTRLLYNTRLYGVVTASLYTYNRNSDVVRAFCEAWCPSTNTLHTMAGELSISLWDLWFFGGLLRMTLK
        VPGEFCFIDCYWEWLEFVVGRKTRLLYNTRLYGVVTASLYTYNRNSDVVRAFCEAWCPSTNTLHTMAGELSISLWDLWFFGGLLRMTLK
Subjt:  VPGEFCFIDCYWEWLEFVVGRKTRLLYNTRLYGVVTASLYTYNRNSDVVRAFCEAWCPSTNTLHTMAGELSISLWDLWFFGGLLRMTLK

A0A5A7VHW8 PMD domain-containing protein1.6e-9589.36Show/hide
Query:  MVYFTERFLSGVRYLVILYDRNQSKEDGLSLIVEKPWAGAFADHWPRLDNNSVLPRLSVEICLFEGKSAWVLQSSIHNEAPNFDRALTLEQRLIEGQTRW
        MVYFTERFLSGVR+LVIL DRNQ +EDGLSLIVEKPWAGAFADHWPRLDNNSVLPRLSVEI L EGKSAW+LQSSIH+EAPN  RALTL QRLIEGQTRW
Subjt:  MVYFTERFLSGVRYLVILYDRNQSKEDGLSLIVEKPWAGAFADHWPRLDNNSVLPRLSVEICLFEGKSAWVLQSSIHNEAPNFDRALTLEQRLIEGQTRW

Query:  GNVTKVPGEFCFIDCYWEWLEFVVGRKTRLLYNTRLYGVVTASLYTYNRNSDVVRAFCEAWCPSTNTLHTMAGELSISLWDLWFFGGL
        G VTKVP EFCF DCYWEWLE VVGR TRLLY+TRLYG VTASLYTY+RNSDVVRAFCEAWCPSTNTLHTMAGELSISLWDLW FGGL
Subjt:  GNVTKVPGEFCFIDCYWEWLEFVVGRKTRLLYNTRLYGVVTASLYTYNRNSDVVRAFCEAWCPSTNTLHTMAGELSISLWDLWFFGGL

A0A5D3CCU5 PMD domain-containing protein5.2e-110100Show/hide
Query:  ERFLSGVRYLVILYDRNQSKEDGLSLIVEKPWAGAFADHWPRLDNNSVLPRLSVEICLFEGKSAWVLQSSIHNEAPNFDRALTLEQRLIEGQTRWGNVTK
        ERFLSGVRYLVILYDRNQSKEDGLSLIVEKPWAGAFADHWPRLDNNSVLPRLSVEICLFEGKSAWVLQSSIHNEAPNFDRALTLEQRLIEGQTRWGNVTK
Subjt:  ERFLSGVRYLVILYDRNQSKEDGLSLIVEKPWAGAFADHWPRLDNNSVLPRLSVEICLFEGKSAWVLQSSIHNEAPNFDRALTLEQRLIEGQTRWGNVTK

Query:  VPGEFCFIDCYWEWLEFVVGRKTRLLYNTRLYGVVTASLYTYNRNSDVVRAFCEAWCPSTNTLHTMAGELSISLWDLWFFGGLLRMTLK
        VPGEFCFIDCYWEWLEFVVGRKTRLLYNTRLYGVVTASLYTYNRNSDVVRAFCEAWCPSTNTLHTMAGELSISLWDLWFFGGLLRMTLK
Subjt:  VPGEFCFIDCYWEWLEFVVGRKTRLLYNTRLYGVVTASLYTYNRNSDVVRAFCEAWCPSTNTLHTMAGELSISLWDLWFFGGLLRMTLK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G50770.1 Aminotransferase-like, plant mobile domain family protein8.5e-0438.46Show/hide
Query:  LYGVVTASLYTYNRNSDVVRAFCEAWCPSTNTLHTMAGELSISLWDLWFFGG
        ++  VTAS Y  N N+++V    E WCP T T     GE +I+L D+    G
Subjt:  LYGVVTASLYTYNRNSDVVRAFCEAWCPSTNTLHTMAGELSISLWDLWFFGG

AT1G50790.1 Plant mobile domain protein family8.5e-0438.3Show/hide
Query:  LYGVVTASLYTYNRNSDVVRAFCEAWCPSTNTLHTMAGELSISLWDL
        ++  + AS Y   +N+D+V    E WCP TNT     GE +I+L D+
Subjt:  LYGVVTASLYTYNRNSDVVRAFCEAWCPSTNTLHTMAGELSISLWDL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTTTACTTCACAGAACGATTCTTGTCTGGAGTTCGATACCTCGTAATACTTTATGATAGAAATCAATCCAAAGAAGATGGACTTAGTCTCATTGTGGAGAAGCCATG
GGCTGGCGCTTTTGCAGATCATTGGCCACGCTTAGACAACAACTCAGTTCTTCCCAGATTATCCGTGGAGATATGTTTGTTTGAGGGAAAGAGCGCATGGGTCTTGCAAT
CTTCTATCCACAATGAGGCTCCTAATTTTGACAGAGCTCTCACTCTTGAACAACGTTTAATTGAAGGCCAAACACGTTGGGGTAATGTGACCAAGGTCCCTGGAGAGTTC
TGCTTTATTGACTGCTATTGGGAGTGGTTGGAGTTTGTAGTTGGTCGAAAAACACGACTTCTTTACAATACTCGTTTGTATGGTGTTGTAACAGCTTCTTTATACACTTA
TAATCGTAACAGTGATGTTGTTCGAGCATTTTGTGAAGCATGGTGTCCTTCGACTAATACTCTTCATACTATGGCGGGCGAGTTATCCATTTCTTTGTGGGACTTATGGT
TCTTTGGGGGTCTTCTAAGAATGACTCTCAAGTAA
mRNA sequenceShow/hide mRNA sequence
ATGGTTTACTTCACAGAACGATTCTTGTCTGGAGTTCGATACCTCGTAATACTTTATGATAGAAATCAATCCAAAGAAGATGGACTTAGTCTCATTGTGGAGAAGCCATG
GGCTGGCGCTTTTGCAGATCATTGGCCACGCTTAGACAACAACTCAGTTCTTCCCAGATTATCCGTGGAGATATGTTTGTTTGAGGGAAAGAGCGCATGGGTCTTGCAAT
CTTCTATCCACAATGAGGCTCCTAATTTTGACAGAGCTCTCACTCTTGAACAACGTTTAATTGAAGGCCAAACACGTTGGGGTAATGTGACCAAGGTCCCTGGAGAGTTC
TGCTTTATTGACTGCTATTGGGAGTGGTTGGAGTTTGTAGTTGGTCGAAAAACACGACTTCTTTACAATACTCGTTTGTATGGTGTTGTAACAGCTTCTTTATACACTTA
TAATCGTAACAGTGATGTTGTTCGAGCATTTTGTGAAGCATGGTGTCCTTCGACTAATACTCTTCATACTATGGCGGGCGAGTTATCCATTTCTTTGTGGGACTTATGGT
TCTTTGGGGGTCTTCTAAGAATGACTCTCAAGTAA
Protein sequenceShow/hide protein sequence
MVYFTERFLSGVRYLVILYDRNQSKEDGLSLIVEKPWAGAFADHWPRLDNNSVLPRLSVEICLFEGKSAWVLQSSIHNEAPNFDRALTLEQRLIEGQTRWGNVTKVPGEF
CFIDCYWEWLEFVVGRKTRLLYNTRLYGVVTASLYTYNRNSDVVRAFCEAWCPSTNTLHTMAGELSISLWDLWFFGGLLRMTLK