; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

IVF0002686 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0002686
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionReverse transcriptase
Genome locationchr08:12953429..12954934
RNA-Seq ExpressionIVF0002686
SyntenyIVF0002686
Gene Ontology termsGO:0006278 - RNA-dependent DNA biosynthetic process (biological process)
GO:0016021 - integral component of membrane (cellular component)
GO:0003676 - nucleic acid binding (molecular function)
GO:0003964 - RNA-directed DNA polymerase activity (molecular function)
InterPro domainsIPR016197 - Chromo-like domain superfamily
IPR036397 - Ribonuclease H superfamily
IPR041588 - Integrase zinc-binding domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0026281.1 reverse transcriptase [Cucumis melo var. makuwa]1.87e-19772.79Show/hide
Query:  MGEAAVSVGKLESLVAHFQVRPFLIDRIIKAQLDDARLRKLAEEVRQNQRLNYSLRGDGALMKCDRLCVPSDQTIKDQILEEAHSSAYAMHPGSTKVYRT
        MGEAAVS+G+L SL+AHFQVRP LIDRIIKAQLDDA +RKLAEEVRQNQRLNYSLRGDGA MK DRLCVPSDQ IK QIL+EAHSSAYAMHPGSTK+YRT
Subjt:  MGEAAVSVGKLESLVAHFQVRPFLIDRIIKAQLDDARLRKLAEEVRQNQRLNYSLRGDGALMKCDRLCVPSDQTIKDQILEEAHSSAYAMHPGSTKVYRT

Query:  LKKHYWWPGIKREIADYVAKCLICQQVKPERQRPAGLLNPLPVPEWKWEHVTMDFHLGLPRTTNGNDGIWFKGNWDAHLSLMEFAYNNSFHSSIGMARYE
        LKKHYWWP +K EIADYVAKCLICQQVKPERQRPA LLNPLPV EWKWEHVTMDF  GLPRTT G++GIW   +    L   +  Y + F S    +  +
Subjt:  LKKHYWWPGIKREIADYVAKCLICQQVKPERQRPAGLLNPLPVPEWKWEHVTMDFHLGLPRTTNGNDGIWFKGNWDAHLSLMEFAYNNSFHSSIGMARYE

Query:  ALYGRCCRTLVCW---NEVGERKLVGLE-LVQITSENVKIIRERLKTAQDRKKSYADKRRRDLEFEVSDKVFLKLSPWKGVLRFGKKGKLSPRFIGPYEI
        AL  +   +       ++  ER +  LE +++  +   K + E L  A   K    +KRRR LEFEV DKVFLKLSPWKGVLRFG KGKLSPRFIGPYEI
Subjt:  ALYGRCCRTLVCW---NEVGERKLVGLE-LVQITSENVKIIRERLKTAQDRKKSYADKRRRDLEFEVSDKVFLKLSPWKGVLRFGKKGKLSPRFIGPYEI

Query:  LERIGPVTYRLALPMELSRIPDVFHVSMLRKYVPDPAHILEAQPVHLKENLSYEEEPIQILDKKEQVVRNKMIPLVKVLWRNHNTEEATWETEQAMKAQY
        LERIGPV +RLALPMELSRI ++FHVSMLRKYVPD ++ILEAQPVHLKENL YEEEPIQIL KKEQV+RNK+IPLVKVLWRNHNTEEATWETEQAMKAQY
Subjt:  LERIGPVTYRLALPMELSRIPDVFHVSMLRKYVPDPAHILEAQPVHLKENLSYEEEPIQILDKKEQVVRNKMIPLVKVLWRNHNTEEATWETEQAMKAQY

Query:  PYLFTSSP
        P+LFTSSP
Subjt:  PYLFTSSP

KAA0042458.1 putative DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa]1.54e-20378.2Show/hide
Query:  MGEAAVSVGKLESLVAHFQVRPFLIDRIIKAQLDDARLRKLAEEVRQNQRLNYSLRGDGALMKCDRLCVPSDQTIKDQILEEAHSSAYAMHPGSTKVYRT
        MGEAAVS+GKL SL+ HFQVRP LIDRIIKAQLDDARLRKLAE+VRQNQRLNYSLRGDGALMK DRLCVPSDQTIKDQILEEAHSSAY MHPGSTKVY+T
Subjt:  MGEAAVSVGKLESLVAHFQVRPFLIDRIIKAQLDDARLRKLAEEVRQNQRLNYSLRGDGALMKCDRLCVPSDQTIKDQILEEAHSSAYAMHPGSTKVYRT

Query:  LKKHYWWPGIKREIADYVAKCLICQQVKPERQRPAGLLNPLPVPEWKWEHVTMDFHLGLPRTTN--GNDGIWFKGNWDAHLSLMEFAYNNSFHSSIGMAR
        LKKH    G      D +AK L   ++      P  +++       +    T  F   L +  +      + FKGNWDAHLSLMEFAYNNSFHSSIGMA 
Subjt:  LKKHYWWPGIKREIADYVAKCLICQQVKPERQRPAGLLNPLPVPEWKWEHVTMDFHLGLPRTTN--GNDGIWFKGNWDAHLSLMEFAYNNSFHSSIGMAR

Query:  YEALYGRCCRTLVCWNEVGERKLVGLELVQITSENVKIIRERLKTAQDRKKSYADKRRRDLEFEVSDKVFLKLSPWKGVLRFGKKGKLSPRFIGPYEILE
        YEALYGR CRTLVCW+EVGERKLVG ELVQITSENVKIIRERLKTAQDR+KSYADK RRDLEFEV DKVFLKLSPWKGVLRFG+KGKLSPRFI PYEILE
Subjt:  YEALYGRCCRTLVCWNEVGERKLVGLELVQITSENVKIIRERLKTAQDRKKSYADKRRRDLEFEVSDKVFLKLSPWKGVLRFGKKGKLSPRFIGPYEILE

Query:  RIGPVTYRLALPMELSRIPDVFHVSMLRKYVPDPAHILEAQPVHLKENLSYEEEPIQILDKKEQVVRNKMIPLVKVLWRNHNTEEATWETEQAMKAQYP
        RIGPV YRLALPMELSRI DVFHVSMLRKYVPDP+HILEAQPV LKENLSYEEEPIQILDKKEQV+RNK+IPLVKVLWRNHNTEEATWE EQAMK   P
Subjt:  RIGPVTYRLALPMELSRIPDVFHVSMLRKYVPDPAHILEAQPVHLKENLSYEEEPIQILDKKEQVVRNKMIPLVKVLWRNHNTEEATWETEQAMKAQYP

KAA0053246.1 DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa]7.27e-18955.44Show/hide
Query:  EAAVSVGKLESLVAHFQVRPFLIDRIIKAQLDDARLRKLAEEVRQNQRLNYSLRGDGALMKCDRLCVPSDQTIKDQILEEAHSSAYAMHPGSTKVYRTLK
        +A V+     SL+A FQVR  L+  I++ Q +D+ L+K  E+ ++   + + LR DGA++K  RLCVP+   +K+ ILEEAHSSAYAMHPGSTK+YRTLK
Subjt:  EAAVSVGKLESLVAHFQVRPFLIDRIIKAQLDDARLRKLAEEVRQNQRLNYSLRGDGALMKCDRLCVPSDQTIKDQILEEAHSSAYAMHPGSTKVYRTLK

Query:  KHYWWPGIKREIADYVAKCLICQQVKPERQRPAGLLNPLPVPEWKWEHVTMDFHLGLPRTTNGNDGIW--------------------------------
        K YWW G+K+EIA+YV +CLICQQVKP RQRP G LNPLPVPEWKWEH+TMDF  GLPRT++G+DGIW                                
Subjt:  KHYWWPGIKREIADYVAKCLICQQVKPERQRPAGLLNPLPVPEWKWEHVTMDFHLGLPRTTNGNDGIW--------------------------------

Query:  -----------------------------------------------------------------FKGNWDAHLSLMEFAYNNSFHSSIGMARYEALYGR
                                                                          KG+WD HL LMEFAYNN++ SSIGMA YEALYGR
Subjt:  -----------------------------------------------------------------FKGNWDAHLSLMEFAYNNSFHSSIGMARYEALYGR

Query:  CCRTLVCWNEVGERKLVGLELVQITSENVKIIRERLKTAQDRKKSYADKRRRDLEFEVSDKVFLKLSPWKGVLRFGKKGKLSPRFIGPYEILERIGPVTY
         CRT VCWNEVGERKLVG ELVQIT+ N+K+IRE L+ AQDR+KSYADKRRR+LEF+V D+VFLKLSPW+GV+RFG+KGKLSPR+IGPY+I ER+GP  Y
Subjt:  CCRTLVCWNEVGERKLVGLELVQITSENVKIIRERLKTAQDRKKSYADKRRRDLEFEVSDKVFLKLSPWKGVLRFGKKGKLSPRFIGPYEILERIGPVTY

Query:  RLALPMELSRIPDVFHVSMLRKYVPDPAHILEAQPVHLKENLSYEEEPIQILDKKEQVVRNKMIPLVKVLWRNHNTEEATWETEQAMKAQYPYLFT
        RL LP+EL+RI DVFHVSMLRKY+PDP+H+L+ QPV LKE+LSY EEP+QILD+KEQV+RNK IPL+KVLWR+H  EEATWE E  MK  YP LF+
Subjt:  RLALPMELSRIPDVFHVSMLRKYVPDPAHILEAQPVHLKENLSYEEEPIQILDKKEQVVRNKMIPLVKVLWRNHNTEEATWETEQAMKAQYPYLFT

KAA0056222.1 reverse transcriptase [Cucumis melo var. makuwa]4.46e-28585.05Show/hide
Query:  MGEAAVSVGKLESLVAHFQVRPFLIDRIIKAQLDDARLRKLAEEVRQNQRLNYSLRGDGALMKCDRLCVPSDQTIKDQILEEAHSSAYAMHPGSTKVYRT
        MGEAAVSVGKLESLVAHFQVRPFLIDRIIKAQLDDARLRKLAEEVRQNQRLNYSLRGDGALMKCDRLCVPSDQTIKDQILEEAHSSAYAMHPGSTKVYRT
Subjt:  MGEAAVSVGKLESLVAHFQVRPFLIDRIIKAQLDDARLRKLAEEVRQNQRLNYSLRGDGALMKCDRLCVPSDQTIKDQILEEAHSSAYAMHPGSTKVYRT

Query:  LKKHYWWPGIKREIADYVAKCLICQQVKPERQRPAGLLNPLPVPEWKWEHVTMDFHLGLPRTTNGNDGIW------------------------------
        LKKHYWWPGIKREIADYVAKCLICQQVKPERQRPAGLLNPLPVPEWKWEHVTMDFHLGLPRTTNGNDGIW                              
Subjt:  LKKHYWWPGIKREIADYVAKCLICQQVKPERQRPAGLLNPLPVPEWKWEHVTMDFHLGLPRTTNGNDGIW------------------------------

Query:  -----------------------------------------FKGNWDAHLSLMEFAYNNSFHSSIGMARYEALYGRCCRTLVCWNEVGERKLVGLELVQI
                                                 FKGNWDAHLSLMEFAYNNSFHSSIGMARYEALYGRCCRTLVCWNEVGERKLVGLELVQI
Subjt:  -----------------------------------------FKGNWDAHLSLMEFAYNNSFHSSIGMARYEALYGRCCRTLVCWNEVGERKLVGLELVQI

Query:  TSENVKIIRERLKTAQDRKKSYADKRRRDLEFEVSDKVFLKLSPWKGVLRFGKKGKLSPRFIGPYEILERIGPVTYRLALPMELSRIPDVFHVSMLRKYV
        TSENVKIIRERLKTAQDRKKSYADKRRRDLEFEVSDKVFLKLSPWKGVLRFGKKGKLSPRFIGPYEILERIGPVTYRLALPMELSRIPDVFHVSMLRKYV
Subjt:  TSENVKIIRERLKTAQDRKKSYADKRRRDLEFEVSDKVFLKLSPWKGVLRFGKKGKLSPRFIGPYEILERIGPVTYRLALPMELSRIPDVFHVSMLRKYV

Query:  PDPAHILEAQPVHLKENLSYEEEPIQILDKKEQVVRNKMIPLVKVLWRNHNTEEATWETEQAMKAQYPYLFTSSP
        PDPAHILEAQPVHLKENLSYEEEPIQILDKKEQVVRNKMIPLVKVLWRNHNTEEATWETEQAMKAQYPYLFTSSP
Subjt:  PDPAHILEAQPVHLKENLSYEEEPIQILDKKEQVVRNKMIPLVKVLWRNHNTEEATWETEQAMKAQYPYLFTSSP

TYK21477.1 reverse transcriptase [Cucumis melo var. makuwa]3.07e-19672.55Show/hide
Query:  MGEAAVSVGKLESLVAHFQVRPFLIDRIIKAQLDDARLRKLAEEVRQNQRLNYSLRGDGALMKCDRLCVPSDQTIKDQILEEAHSSAYAMHPGSTKVYRT
        MGEAAVS+G+L SL+AHFQVRP LIDRIIKAQLDDA +RKLAEEVRQNQRLNYSLRGDGA MK DRLCVPSDQ IK QIL+EAHSSAYAMHPGSTK+YRT
Subjt:  MGEAAVSVGKLESLVAHFQVRPFLIDRIIKAQLDDARLRKLAEEVRQNQRLNYSLRGDGALMKCDRLCVPSDQTIKDQILEEAHSSAYAMHPGSTKVYRT

Query:  LKKHYWWPGIKREIADYVAKCLICQQVKPERQRPAGLLNPLPVPEWKWEHVTMDFHLGLPRTTNGNDGIWFKGNWDAHLSLMEFAYNNSFHSSIGMARYE
        LKKHYWWP +K EIADYVAKCLICQQVKPERQRPA LLNPLPV EWKWEHVTMDF  GLPRTT G++GIW   +    L   +  Y + F S    +  +
Subjt:  LKKHYWWPGIKREIADYVAKCLICQQVKPERQRPAGLLNPLPVPEWKWEHVTMDFHLGLPRTTNGNDGIWFKGNWDAHLSLMEFAYNNSFHSSIGMARYE

Query:  ALYGRCCRTLVCW---NEVGERKLVGLE-LVQITSENVKIIRERLKTAQDRKKSYADKRRRDLEFEVSDKVFLKLSPWKGVLRFGKKGKLSPRFIGPYEI
        AL  +   +       ++  ER +  LE +++  +   K + E L  A   K    +KRRR LEFEV DKVFLKLSPWKGVLRFG KGKLSPRFIGPYEI
Subjt:  ALYGRCCRTLVCW---NEVGERKLVGLE-LVQITSENVKIIRERLKTAQDRKKSYADKRRRDLEFEVSDKVFLKLSPWKGVLRFGKKGKLSPRFIGPYEI

Query:  LERIGPVTYRLALPMELSRIPDVFHVSMLRKYVPDPAHILEAQPVHLKENLSYEEEPIQILDKKEQVVRNKMIPLVKVLWRNHNTEEATWETEQAMKAQY
        LERIGPV +RLALPMELSRI ++FHVSMLRKYVPD ++ILEAQPVHLKENL YEEE IQIL KKEQV+RNK+IPLVKVLWRNHNTEEATWETEQAMKAQY
Subjt:  LERIGPVTYRLALPMELSRIPDVFHVSMLRKYVPDPAHILEAQPVHLKENLSYEEEPIQILDKKEQVVRNKMIPLVKVLWRNHNTEEATWETEQAMKAQY

Query:  PYLFTSSP
        P+LFTSSP
Subjt:  PYLFTSSP

TrEMBL top hitse value%identityAlignment
A0A5A7SQ03 Reverse transcriptase9.1e-15772.3Show/hide
Query:  MGEAAVSVGKLESLVAHFQVRPFLIDRIIKAQLDDARLRKLAEEVRQNQRLNYSLRGDGALMKCDRLCVPSDQTIKDQILEEAHSSAYAMHPGSTKVYRT
        MGEAAVS+G+L SL+AHFQVRP LIDRIIKAQLDDA +RKLAEEVRQNQRLNYSLRGDGA MK DRLCVPSDQ IK QIL+EAHSSAYAMHPGSTK+YRT
Subjt:  MGEAAVSVGKLESLVAHFQVRPFLIDRIIKAQLDDARLRKLAEEVRQNQRLNYSLRGDGALMKCDRLCVPSDQTIKDQILEEAHSSAYAMHPGSTKVYRT

Query:  LKKHYWWPGIKREIADYVAKCLICQQVKPERQRPAGLLNPLPVPEWKWEHVTMDFHLGLPRTTNGNDGIWFKGNWDAHLSLMEFAYNNSFHSSIGMARYE
        LKKHYWWP +K EIADYVAKCLICQQVKPERQRPA LLNPLPV EWKWEHVTMDF  GLPRTT G++GIW   +    L   +  Y + F S    +  +
Subjt:  LKKHYWWPGIKREIADYVAKCLICQQVKPERQRPAGLLNPLPVPEWKWEHVTMDFHLGLPRTTNGNDGIWFKGNWDAHLSLMEFAYNNSFHSSIGMARYE

Query:  ALYGRCCRTLVC---WNEVGERKLVGLE-LVQITSENVKIIRERLKTAQDRKKSYADKRRRDLEFEVSDKVFLKLSPWKGVLRFGKKGKLSPRFIGPYEI
        AL  +   +       ++  ER +  LE +++  +   K + E        K    +KRRR LEFEV DKVFLKLSPWKGVLRFG KGKLSPRFIGPYEI
Subjt:  ALYGRCCRTLVC---WNEVGERKLVGLE-LVQITSENVKIIRERLKTAQDRKKSYADKRRRDLEFEVSDKVFLKLSPWKGVLRFGKKGKLSPRFIGPYEI

Query:  LERIGPVTYRLALPMELSRIPDVFHVSMLRKYVPDPAHILEAQPVHLKENLSYEEEPIQILDKKEQVVRNKMIPLVKVLWRNHNTEEATWETEQAMKAQY
        LERIGPV +RLALPMELSRI ++FHVSMLRKYVPD ++ILEAQPVHLKENL YEEEPIQIL KKEQV+RNK+IPLVKVLWRNHNTEEATWETEQAMKAQY
Subjt:  LERIGPVTYRLALPMELSRIPDVFHVSMLRKYVPDPAHILEAQPVHLKENLSYEEEPIQILDKKEQVVRNKMIPLVKVLWRNHNTEEATWETEQAMKAQY

Query:  PYLFTSSP
        P+LFTSSP
Subjt:  PYLFTSSP

A0A5A7UK27 Reverse transcriptase1.7e-22785.05Show/hide
Query:  MGEAAVSVGKLESLVAHFQVRPFLIDRIIKAQLDDARLRKLAEEVRQNQRLNYSLRGDGALMKCDRLCVPSDQTIKDQILEEAHSSAYAMHPGSTKVYRT
        MGEAAVSVGKLESLVAHFQVRPFLIDRIIKAQLDDARLRKLAEEVRQNQRLNYSLRGDGALMKCDRLCVPSDQTIKDQILEEAHSSAYAMHPGSTKVYRT
Subjt:  MGEAAVSVGKLESLVAHFQVRPFLIDRIIKAQLDDARLRKLAEEVRQNQRLNYSLRGDGALMKCDRLCVPSDQTIKDQILEEAHSSAYAMHPGSTKVYRT

Query:  LKKHYWWPGIKREIADYVAKCLICQQVKPERQRPAGLLNPLPVPEWKWEHVTMDFHLGLPRTTNGNDGIW------------------------------
        LKKHYWWPGIKREIADYVAKCLICQQVKPERQRPAGLLNPLPVPEWKWEHVTMDFHLGLPRTTNGNDGIW                              
Subjt:  LKKHYWWPGIKREIADYVAKCLICQQVKPERQRPAGLLNPLPVPEWKWEHVTMDFHLGLPRTTNGNDGIW------------------------------

Query:  -----------------------------------------FKGNWDAHLSLMEFAYNNSFHSSIGMARYEALYGRCCRTLVCWNEVGERKLVGLELVQI
                                                 FKGNWDAHLSLMEFAYNNSFHSSIGMARYEALYGRCCRTLVCWNEVGERKLVGLELVQI
Subjt:  -----------------------------------------FKGNWDAHLSLMEFAYNNSFHSSIGMARYEALYGRCCRTLVCWNEVGERKLVGLELVQI

Query:  TSENVKIIRERLKTAQDRKKSYADKRRRDLEFEVSDKVFLKLSPWKGVLRFGKKGKLSPRFIGPYEILERIGPVTYRLALPMELSRIPDVFHVSMLRKYV
        TSENVKIIRERLKTAQDRKKSYADKRRRDLEFEVSDKVFLKLSPWKGVLRFGKKGKLSPRFIGPYEILERIGPVTYRLALPMELSRIPDVFHVSMLRKYV
Subjt:  TSENVKIIRERLKTAQDRKKSYADKRRRDLEFEVSDKVFLKLSPWKGVLRFGKKGKLSPRFIGPYEILERIGPVTYRLALPMELSRIPDVFHVSMLRKYV

Query:  PDPAHILEAQPVHLKENLSYEEEPIQILDKKEQVVRNKMIPLVKVLWRNHNTEEATWETEQAMKAQYPYLFTSSP
        PDPAHILEAQPVHLKENLSYEEEPIQILDKKEQVVRNKMIPLVKVLWRNHNTEEATWETEQAMKAQYPYLFTSSP
Subjt:  PDPAHILEAQPVHLKENLSYEEEPIQILDKKEQVVRNKMIPLVKVLWRNHNTEEATWETEQAMKAQYPYLFTSSP

A0A5A7UKK4 Reverse transcriptase6.1e-15358.21Show/hide
Query:  EAAVSVGKLESLVAHFQVRPFLIDRIIKAQLDDARLRKLAEEVRQNQRLNYSLRGDGALMKCDRLCVPSDQTIKDQILEEAHSSAYAMHPGSTKVYRTLK
        +A VS     SL+A FQVR  L+  I++ Q +D+ L+K  E+ ++   + + LR DGA++K  RLCVP+   +K+ ILEEAHSSAYAMHPGSTK+YRTLK
Subjt:  EAAVSVGKLESLVAHFQVRPFLIDRIIKAQLDDARLRKLAEEVRQNQRLNYSLRGDGALMKCDRLCVPSDQTIKDQILEEAHSSAYAMHPGSTKVYRTLK

Query:  KHYWWPGIKREIADYVAKCLICQQVKPERQRPAGLLNPLPVPEWKWEHVTMDFHLGLPRTTNGNDGIW--------------------------------
        K YWW G+K+EIA+YV +CLICQQVKP RQRP G LNPLPVPEWK EH+TMDF  GLPRT++G+DG+W                                
Subjt:  KHYWWPGIKREIADYVAKCLICQQVKPERQRPAGLLNPLPVPEWKWEHVTMDFHLGLPRTTNGNDGIW--------------------------------

Query:  --------------------------------------FKGNWDAHLSLMEFAYNNSFHSSIGMARYEALYGRCCRTLVCWNEVGERKLVGLELVQITSE
                                               KG+WD HL LMEFAYNN++ SSIGMA YEA+YGR CRT VCWNEVGERKLVG ELVQIT+ 
Subjt:  --------------------------------------FKGNWDAHLSLMEFAYNNSFHSSIGMARYEALYGRCCRTLVCWNEVGERKLVGLELVQITSE

Query:  NVKIIRERLKTAQDRKKSYADKRRRDLEFEVSDKVFLKLSPWKGVLRFGKKGKLSPRFIGPYEILERIGPVTYRLALPMELSRIPDVFHVSMLRKYVPDP
        N+K+IRE L+ AQDR+KSYADKRRR+LEFEV D+VFLKLSPW+GV+RFG+KGKLS R+IGPY+I ER+GP  YRL LP+EL+RI DVFHVSMLRKY+PDP
Subjt:  NVKIIRERLKTAQDRKKSYADKRRRDLEFEVSDKVFLKLSPWKGVLRFGKKGKLSPRFIGPYEILERIGPVTYRLALPMELSRIPDVFHVSMLRKYVPDP

Query:  AHILEAQPVHLKENLSYEEEPIQILDKKEQVVRNKMIPLVKVLWRNHNTEEATWETEQAMKAQYPYLFT
        +H+L+ QPV LKE+LSY EEP+QILD+KEQV+RNK IPL+KVLWR+H  EEATWE E  MK  YP LF+
Subjt:  AHILEAQPVHLKENLSYEEEPIQILDKKEQVVRNKMIPLVKVLWRNHNTEEATWETEQAMKAQYPYLFT

A0A5D3DCU0 Reverse transcriptase7.7e-15672.06Show/hide
Query:  MGEAAVSVGKLESLVAHFQVRPFLIDRIIKAQLDDARLRKLAEEVRQNQRLNYSLRGDGALMKCDRLCVPSDQTIKDQILEEAHSSAYAMHPGSTKVYRT
        MGEAAVS+G+L SL+AHFQVRP LIDRIIKAQLDDA +RKLAEEVRQNQRLNYSLRGDGA MK DRLCVPSDQ IK QIL+EAHSSAYAMHPGSTK+YRT
Subjt:  MGEAAVSVGKLESLVAHFQVRPFLIDRIIKAQLDDARLRKLAEEVRQNQRLNYSLRGDGALMKCDRLCVPSDQTIKDQILEEAHSSAYAMHPGSTKVYRT

Query:  LKKHYWWPGIKREIADYVAKCLICQQVKPERQRPAGLLNPLPVPEWKWEHVTMDFHLGLPRTTNGNDGIWFKGNWDAHLSLMEFAYNNSFHSSIGMARYE
        LKKHYWWP +K EIADYVAKCLICQQVKPERQRPA LLNPLPV EWKWEHVTMDF  GLPRTT G++GIW   +    L   +  Y + F S    +  +
Subjt:  LKKHYWWPGIKREIADYVAKCLICQQVKPERQRPAGLLNPLPVPEWKWEHVTMDFHLGLPRTTNGNDGIWFKGNWDAHLSLMEFAYNNSFHSSIGMARYE

Query:  ALYGRCCRTLVC---WNEVGERKLVGLE-LVQITSENVKIIRERLKTAQDRKKSYADKRRRDLEFEVSDKVFLKLSPWKGVLRFGKKGKLSPRFIGPYEI
        AL  +   +       ++  ER +  LE +++  +   K + E        K    +KRRR LEFEV DKVFLKLSPWKGVLRFG KGKLSPRFIGPYEI
Subjt:  ALYGRCCRTLVC---WNEVGERKLVGLE-LVQITSENVKIIRERLKTAQDRKKSYADKRRRDLEFEVSDKVFLKLSPWKGVLRFGKKGKLSPRFIGPYEI

Query:  LERIGPVTYRLALPMELSRIPDVFHVSMLRKYVPDPAHILEAQPVHLKENLSYEEEPIQILDKKEQVVRNKMIPLVKVLWRNHNTEEATWETEQAMKAQY
        LERIGPV +RLALPMELSRI ++FHVSMLRKYVPD ++ILEAQPVHLKENL YEEE IQIL KKEQV+RNK+IPLVKVLWRNHNTEEATWETEQAMKAQY
Subjt:  LERIGPVTYRLALPMELSRIPDVFHVSMLRKYVPDPAHILEAQPVHLKENLSYEEEPIQILDKKEQVVRNKMIPLVKVLWRNHNTEEATWETEQAMKAQY

Query:  PYLFTSSP
        P+LFTSSP
Subjt:  PYLFTSSP

A0A5D3DHF7 Putative DNA/RNA polymerases superfamily protein1.2e-16478.2Show/hide
Query:  MGEAAVSVGKLESLVAHFQVRPFLIDRIIKAQLDDARLRKLAEEVRQNQRLNYSLRGDGALMKCDRLCVPSDQTIKDQILEEAHSSAYAMHPGSTKVYRT
        MGEAAVS+GKL SL+ HFQVRP LIDRIIKAQLDDARLRKLAE+VRQNQRLNYSLRGDGALMK DRLCVPSDQTIKDQILEEAHSSAY MHPGSTKVY+T
Subjt:  MGEAAVSVGKLESLVAHFQVRPFLIDRIIKAQLDDARLRKLAEEVRQNQRLNYSLRGDGALMKCDRLCVPSDQTIKDQILEEAHSSAYAMHPGSTKVYRT

Query:  LKKHYWWPGIKREIADYVAKCLICQQVKPERQRPAGLLNPLPVPEWKWEHVTMDFHLGLPRTTN--GNDGIWFKGNWDAHLSLMEFAYNNSFHSSIGMAR
        LKKH    G      D +AK  + + V            P+ +   +    T  F   L +  +      + FKGNWDAHLSLMEFAYNNSFHSSIGMA 
Subjt:  LKKHYWWPGIKREIADYVAKCLICQQVKPERQRPAGLLNPLPVPEWKWEHVTMDFHLGLPRTTN--GNDGIWFKGNWDAHLSLMEFAYNNSFHSSIGMAR

Query:  YEALYGRCCRTLVCWNEVGERKLVGLELVQITSENVKIIRERLKTAQDRKKSYADKRRRDLEFEVSDKVFLKLSPWKGVLRFGKKGKLSPRFIGPYEILE
        YEALYGR CRTLVCW+EVGERKLVG ELVQITSENVKIIRERLKTAQDR+KSYADK RRDLEFEV DKVFLKLSPWKGVLRFG+KGKLSPRFI PYEILE
Subjt:  YEALYGRCCRTLVCWNEVGERKLVGLELVQITSENVKIIRERLKTAQDRKKSYADKRRRDLEFEVSDKVFLKLSPWKGVLRFGKKGKLSPRFIGPYEILE

Query:  RIGPVTYRLALPMELSRIPDVFHVSMLRKYVPDPAHILEAQPVHLKENLSYEEEPIQILDKKEQVVRNKMIPLVKVLWRNHNTEEATWETEQAMKAQYP
        RIGPV YRLALPMELSRI DVFHVSMLRKYVPDP+HILEAQPV LKENLSYEEEPIQILDKKEQV+RNK+IPLVKVLWRNHNTEEATWE EQAMK   P
Subjt:  RIGPVTYRLALPMELSRIPDVFHVSMLRKYVPDPAHILEAQPVHLKENLSYEEEPIQILDKKEQVVRNKMIPLVKVLWRNHNTEEATWETEQAMKAQYP

SwissProt top hitse value%identityAlignment
P0CT34 Transposon Tf2-1 polyprotein2.0e-2022.77Show/hide
Query:  DRIIKAQLDDARLRKLAEEVRQNQRLNYSLRGDGALMKC-DRLCVPSDQTIKDQILEEAHSSAYAMHPGSTKVYRTLKKHYWWPGIKREIADYVAKCLIC
        ++++    +D +L  L     +    N  L+ DG L+   D++ +P+D  +   I+++ H     +HPG   +   + + + W GI+++I +YV  C  C
Subjt:  DRIIKAQLDDARLRKLAEEVRQNQRLNYSLRGDGALMKC-DRLCVPSDQTIKDQILEEAHSSAYAMHPGSTKVYRTLKKHYWWPGIKREIADYVAKCLIC

Query:  QQVKPERQRPAGLLNPLPVPEWKWEHVTMDFHLGLPRTTNGN----------------------------------------------------------
        Q  K    +P G L P+P  E  WE ++MDF   LP ++  N                                                          
Subjt:  QQVKPERQRPAGLLNPLPVPEWKWEHVTMDFHLGLPRTTNGN----------------------------------------------------------

Query:  ---------------------DGIWFKGN-----------------WDAHLSLMEFAYNNSFHSSIGMARYEAL--YGRCCRTLVCWNEVGERKLVGLEL
                             DG   + N                 W  H+SL++ +YNN+ HS+  M  +E +  Y      L   +   +      E 
Subjt:  ---------------------DGIWFKGN-----------------WDAHLSLMEFAYNNSFHSSIGMARYEAL--YGRCCRTLVCWNEVGERKLVGLEL

Query:  VQITSENVKIIRERLKTAQDRKKSYADKRRRDL-EFEVSDKVFLKLSPWKGVLRFGKKGKLSPRFIGPYEILERIGPVTYRLALPMELSRI-PDVFHVSM
        +Q+     + ++E L T   + K Y D + +++ EF+  D V +K +   G L   K  KL+P F GP+ +L++ GP  Y L LP  +  +    FHVS 
Subjt:  VQITSENVKIIRERLKTAQDRKKSYADKRRRDL-EFEVSDKVFLKLSPWKGVLRFGKKGKLSPRFIGPYEILERIGPVTYRLALPMELSRI-PDVFHVSM

Query:  LRKY
        L KY
Subjt:  LRKY

P0CT35 Transposon Tf2-2 polyprotein2.0e-2022.77Show/hide
Query:  DRIIKAQLDDARLRKLAEEVRQNQRLNYSLRGDGALMKC-DRLCVPSDQTIKDQILEEAHSSAYAMHPGSTKVYRTLKKHYWWPGIKREIADYVAKCLIC
        ++++    +D +L  L     +    N  L+ DG L+   D++ +P+D  +   I+++ H     +HPG   +   + + + W GI+++I +YV  C  C
Subjt:  DRIIKAQLDDARLRKLAEEVRQNQRLNYSLRGDGALMKC-DRLCVPSDQTIKDQILEEAHSSAYAMHPGSTKVYRTLKKHYWWPGIKREIADYVAKCLIC

Query:  QQVKPERQRPAGLLNPLPVPEWKWEHVTMDFHLGLPRTTNGN----------------------------------------------------------
        Q  K    +P G L P+P  E  WE ++MDF   LP ++  N                                                          
Subjt:  QQVKPERQRPAGLLNPLPVPEWKWEHVTMDFHLGLPRTTNGN----------------------------------------------------------

Query:  ---------------------DGIWFKGN-----------------WDAHLSLMEFAYNNSFHSSIGMARYEAL--YGRCCRTLVCWNEVGERKLVGLEL
                             DG   + N                 W  H+SL++ +YNN+ HS+  M  +E +  Y      L   +   +      E 
Subjt:  ---------------------DGIWFKGN-----------------WDAHLSLMEFAYNNSFHSSIGMARYEAL--YGRCCRTLVCWNEVGERKLVGLEL

Query:  VQITSENVKIIRERLKTAQDRKKSYADKRRRDL-EFEVSDKVFLKLSPWKGVLRFGKKGKLSPRFIGPYEILERIGPVTYRLALPMELSRI-PDVFHVSM
        +Q+     + ++E L T   + K Y D + +++ EF+  D V +K +   G L   K  KL+P F GP+ +L++ GP  Y L LP  +  +    FHVS 
Subjt:  VQITSENVKIIRERLKTAQDRKKSYADKRRRDL-EFEVSDKVFLKLSPWKGVLRFGKKGKLSPRFIGPYEILERIGPVTYRLALPMELSRI-PDVFHVSM

Query:  LRKY
        L KY
Subjt:  LRKY

P0CT36 Transposon Tf2-3 polyprotein2.0e-2022.77Show/hide
Query:  DRIIKAQLDDARLRKLAEEVRQNQRLNYSLRGDGALMKC-DRLCVPSDQTIKDQILEEAHSSAYAMHPGSTKVYRTLKKHYWWPGIKREIADYVAKCLIC
        ++++    +D +L  L     +    N  L+ DG L+   D++ +P+D  +   I+++ H     +HPG   +   + + + W GI+++I +YV  C  C
Subjt:  DRIIKAQLDDARLRKLAEEVRQNQRLNYSLRGDGALMKC-DRLCVPSDQTIKDQILEEAHSSAYAMHPGSTKVYRTLKKHYWWPGIKREIADYVAKCLIC

Query:  QQVKPERQRPAGLLNPLPVPEWKWEHVTMDFHLGLPRTTNGN----------------------------------------------------------
        Q  K    +P G L P+P  E  WE ++MDF   LP ++  N                                                          
Subjt:  QQVKPERQRPAGLLNPLPVPEWKWEHVTMDFHLGLPRTTNGN----------------------------------------------------------

Query:  ---------------------DGIWFKGN-----------------WDAHLSLMEFAYNNSFHSSIGMARYEAL--YGRCCRTLVCWNEVGERKLVGLEL
                             DG   + N                 W  H+SL++ +YNN+ HS+  M  +E +  Y      L   +   +      E 
Subjt:  ---------------------DGIWFKGN-----------------WDAHLSLMEFAYNNSFHSSIGMARYEAL--YGRCCRTLVCWNEVGERKLVGLEL

Query:  VQITSENVKIIRERLKTAQDRKKSYADKRRRDL-EFEVSDKVFLKLSPWKGVLRFGKKGKLSPRFIGPYEILERIGPVTYRLALPMELSRI-PDVFHVSM
        +Q+     + ++E L T   + K Y D + +++ EF+  D V +K +   G L   K  KL+P F GP+ +L++ GP  Y L LP  +  +    FHVS 
Subjt:  VQITSENVKIIRERLKTAQDRKKSYADKRRRDL-EFEVSDKVFLKLSPWKGVLRFGKKGKLSPRFIGPYEILERIGPVTYRLALPMELSRI-PDVFHVSM

Query:  LRKY
        L KY
Subjt:  LRKY

P0CT41 Transposon Tf2-12 polyprotein2.0e-2022.77Show/hide
Query:  DRIIKAQLDDARLRKLAEEVRQNQRLNYSLRGDGALMKC-DRLCVPSDQTIKDQILEEAHSSAYAMHPGSTKVYRTLKKHYWWPGIKREIADYVAKCLIC
        ++++    +D +L  L     +    N  L+ DG L+   D++ +P+D  +   I+++ H     +HPG   +   + + + W GI+++I +YV  C  C
Subjt:  DRIIKAQLDDARLRKLAEEVRQNQRLNYSLRGDGALMKC-DRLCVPSDQTIKDQILEEAHSSAYAMHPGSTKVYRTLKKHYWWPGIKREIADYVAKCLIC

Query:  QQVKPERQRPAGLLNPLPVPEWKWEHVTMDFHLGLPRTTNGN----------------------------------------------------------
        Q  K    +P G L P+P  E  WE ++MDF   LP ++  N                                                          
Subjt:  QQVKPERQRPAGLLNPLPVPEWKWEHVTMDFHLGLPRTTNGN----------------------------------------------------------

Query:  ---------------------DGIWFKGN-----------------WDAHLSLMEFAYNNSFHSSIGMARYEAL--YGRCCRTLVCWNEVGERKLVGLEL
                             DG   + N                 W  H+SL++ +YNN+ HS+  M  +E +  Y      L   +   +      E 
Subjt:  ---------------------DGIWFKGN-----------------WDAHLSLMEFAYNNSFHSSIGMARYEAL--YGRCCRTLVCWNEVGERKLVGLEL

Query:  VQITSENVKIIRERLKTAQDRKKSYADKRRRDL-EFEVSDKVFLKLSPWKGVLRFGKKGKLSPRFIGPYEILERIGPVTYRLALPMELSRI-PDVFHVSM
        +Q+     + ++E L T   + K Y D + +++ EF+  D V +K +   G L   K  KL+P F GP+ +L++ GP  Y L LP  +  +    FHVS 
Subjt:  VQITSENVKIIRERLKTAQDRKKSYADKRRRDL-EFEVSDKVFLKLSPWKGVLRFGKKGKLSPRFIGPYEILERIGPVTYRLALPMELSRI-PDVFHVSM

Query:  LRKY
        L KY
Subjt:  LRKY

Q9UR07 Transposon Tf2-11 polyprotein2.0e-2022.77Show/hide
Query:  DRIIKAQLDDARLRKLAEEVRQNQRLNYSLRGDGALMKC-DRLCVPSDQTIKDQILEEAHSSAYAMHPGSTKVYRTLKKHYWWPGIKREIADYVAKCLIC
        ++++    +D +L  L     +    N  L+ DG L+   D++ +P+D  +   I+++ H     +HPG   +   + + + W GI+++I +YV  C  C
Subjt:  DRIIKAQLDDARLRKLAEEVRQNQRLNYSLRGDGALMKC-DRLCVPSDQTIKDQILEEAHSSAYAMHPGSTKVYRTLKKHYWWPGIKREIADYVAKCLIC

Query:  QQVKPERQRPAGLLNPLPVPEWKWEHVTMDFHLGLPRTTNGN----------------------------------------------------------
        Q  K    +P G L P+P  E  WE ++MDF   LP ++  N                                                          
Subjt:  QQVKPERQRPAGLLNPLPVPEWKWEHVTMDFHLGLPRTTNGN----------------------------------------------------------

Query:  ---------------------DGIWFKGN-----------------WDAHLSLMEFAYNNSFHSSIGMARYEAL--YGRCCRTLVCWNEVGERKLVGLEL
                             DG   + N                 W  H+SL++ +YNN+ HS+  M  +E +  Y      L   +   +      E 
Subjt:  ---------------------DGIWFKGN-----------------WDAHLSLMEFAYNNSFHSSIGMARYEAL--YGRCCRTLVCWNEVGERKLVGLEL

Query:  VQITSENVKIIRERLKTAQDRKKSYADKRRRDL-EFEVSDKVFLKLSPWKGVLRFGKKGKLSPRFIGPYEILERIGPVTYRLALPMELSRI-PDVFHVSM
        +Q+     + ++E L T   + K Y D + +++ EF+  D V +K +   G L   K  KL+P F GP+ +L++ GP  Y L LP  +  +    FHVS 
Subjt:  VQITSENVKIIRERLKTAQDRKKSYADKRRRDL-EFEVSDKVFLKLSPWKGVLRFGKKGKLSPRFIGPYEILERIGPVTYRLALPMELSRI-PDVFHVSM

Query:  LRKY
        L KY
Subjt:  LRKY

Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGTGAAGCCGCTGTGTCAGTAGGCAAGTTGGAAAGTTTAGTTGCACATTTCCAAGTGCGACCTTTTTTGATAGACCGTATTATTAAAGCCCAGCTAGATGATGCAAG
ACTGAGGAAGTTAGCAGAAGAGGTAAGACAAAACCAAAGATTGAATTATAGCTTGAGGGGTGATGGTGCCTTGATGAAATGTGATAGGTTGTGTGTACCCAGTGACCAAA
CGATAAAAGATCAAATTTTAGAGGAAGCACATAGTTCTGCATATGCAATGCATCCTGGTAGTACGAAAGTGTATAGAACTTTGAAGAAACACTATTGGTGGCCAGGTATA
AAGCGTGAGATTGCAGATTATGTGGCTAAGTGTTTGATATGTCAGCAAGTTAAACCTGAACGTCAGAGACCAGCGGGACTCCTAAATCCTCTTCCAGTACCGGAATGGAA
ATGGGAGCATGTTACCATGGACTTTCATTTGGGACTACCCCGCACAACGAATGGGAATGATGGCATTTGGTTTAAGGGTAATTGGGATGCTCATCTATCCTTGATGGAAT
TTGCATATAATAATAGTTTCCATTCAAGTATTGGAATGGCACGATATGAGGCTTTGTATGGTAGATGTTGTAGAACTCTCGTGTGCTGGAATGAAGTTGGAGAAAGGAAG
TTAGTGGGGCTAGAATTAGTACAAATCACTTCAGAGAATGTGAAGATTATTAGGGAAAGATTGAAAACAGCCCAGGATCGTAAAAAAAGTTATGCAGATAAGCGCCGACG
AGATTTAGAATTTGAAGTTAGTGACAAAGTCTTTCTAAAGTTATCTCCTTGGAAAGGTGTGCTTCGATTTGGCAAAAAAGGAAAGTTGAGTCCAAGATTTATTGGGCCTT
ATGAGATACTTGAACGTATTGGGCCTGTAACATACCGTTTGGCGTTACCTATGGAACTTTCCAGGATTCCTGATGTGTTTCATGTGTCAATGCTGCGTAAGTACGTCCCA
GATCCAGCTCATATTCTTGAAGCACAACCAGTTCATTTGAAAGAAAACTTGTCTTACGAAGAGGAGCCAATACAAATTCTTGACAAAAAAGAACAAGTGGTAAGGAACAA
AATGATCCCATTAGTTAAGGTTCTTTGGAGGAACCATAATACTGAAGAAGCAACGTGGGAAACAGAGCAAGCAATGAAGGCGCAATACCCATATCTTTTCACATCATCAC
CTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGGTGAAGCCGCTGTGTCAGTAGGCAAGTTGGAAAGTTTAGTTGCACATTTCCAAGTGCGACCTTTTTTGATAGACCGTATTATTAAAGCCCAGCTAGATGATGCAAG
ACTGAGGAAGTTAGCAGAAGAGGTAAGACAAAACCAAAGATTGAATTATAGCTTGAGGGGTGATGGTGCCTTGATGAAATGTGATAGGTTGTGTGTACCCAGTGACCAAA
CGATAAAAGATCAAATTTTAGAGGAAGCACATAGTTCTGCATATGCAATGCATCCTGGTAGTACGAAAGTGTATAGAACTTTGAAGAAACACTATTGGTGGCCAGGTATA
AAGCGTGAGATTGCAGATTATGTGGCTAAGTGTTTGATATGTCAGCAAGTTAAACCTGAACGTCAGAGACCAGCGGGACTCCTAAATCCTCTTCCAGTACCGGAATGGAA
ATGGGAGCATGTTACCATGGACTTTCATTTGGGACTACCCCGCACAACGAATGGGAATGATGGCATTTGGTTTAAGGGTAATTGGGATGCTCATCTATCCTTGATGGAAT
TTGCATATAATAATAGTTTCCATTCAAGTATTGGAATGGCACGATATGAGGCTTTGTATGGTAGATGTTGTAGAACTCTCGTGTGCTGGAATGAAGTTGGAGAAAGGAAG
TTAGTGGGGCTAGAATTAGTACAAATCACTTCAGAGAATGTGAAGATTATTAGGGAAAGATTGAAAACAGCCCAGGATCGTAAAAAAAGTTATGCAGATAAGCGCCGACG
AGATTTAGAATTTGAAGTTAGTGACAAAGTCTTTCTAAAGTTATCTCCTTGGAAAGGTGTGCTTCGATTTGGCAAAAAAGGAAAGTTGAGTCCAAGATTTATTGGGCCTT
ATGAGATACTTGAACGTATTGGGCCTGTAACATACCGTTTGGCGTTACCTATGGAACTTTCCAGGATTCCTGATGTGTTTCATGTGTCAATGCTGCGTAAGTACGTCCCA
GATCCAGCTCATATTCTTGAAGCACAACCAGTTCATTTGAAAGAAAACTTGTCTTACGAAGAGGAGCCAATACAAATTCTTGACAAAAAAGAACAAGTGGTAAGGAACAA
AATGATCCCATTAGTTAAGGTTCTTTGGAGGAACCATAATACTGAAGAAGCAACGTGGGAAACAGAGCAAGCAATGAAGGCGCAATACCCATATCTTTTCACATCATCAC
CTTGA
Protein sequenceShow/hide protein sequence
MGEAAVSVGKLESLVAHFQVRPFLIDRIIKAQLDDARLRKLAEEVRQNQRLNYSLRGDGALMKCDRLCVPSDQTIKDQILEEAHSSAYAMHPGSTKVYRTLKKHYWWPGI
KREIADYVAKCLICQQVKPERQRPAGLLNPLPVPEWKWEHVTMDFHLGLPRTTNGNDGIWFKGNWDAHLSLMEFAYNNSFHSSIGMARYEALYGRCCRTLVCWNEVGERK
LVGLELVQITSENVKIIRERLKTAQDRKKSYADKRRRDLEFEVSDKVFLKLSPWKGVLRFGKKGKLSPRFIGPYEILERIGPVTYRLALPMELSRIPDVFHVSMLRKYVP
DPAHILEAQPVHLKENLSYEEEPIQILDKKEQVVRNKMIPLVKVLWRNHNTEEATWETEQAMKAQYPYLFTSSP