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IVF0002689 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0002689
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionPMD domain-containing protein
Genome locationchr10:9644297..9644540
RNA-Seq ExpressionIVF0002689
SyntenyIVF0002689
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0031645.1 hypothetical protein E6C27_scaffold139G004180 [Cucumis melo var. makuwa]5.72e-1867.16Show/hide
Query:  YAVDSTIEEVGTSKTPASKPVKQSLRPSTLLEEI--------PVHPKEMFVLKNPYRRSARHMLPLS
        + +DSTIE VGTSKTP SKP +QSLRPS+LLEEI         +HPKEM  LKNPYRRSAR MLPL+
Subjt:  YAVDSTIEEVGTSKTPASKPVKQSLRPSTLLEEI--------PVHPKEMFVLKNPYRRSARHMLPLS

KAA0037262.1 hypothetical protein E6C27_scaffold379G001910 [Cucumis melo var. makuwa]1.93e-0986.11Show/hide
Query:  GPYAVDSTIEEVGTSKTPASKPVKQSLRPSTLLEEI
        GP+AVDSTIE VGTSKTP SKP KQSLRPS LLEEI
Subjt:  GPYAVDSTIEEVGTSKTPASKPVKQSLRPSTLLEEI

KAA0048242.1 hypothetical protein E6C27_scaffold63G001580 [Cucumis melo var. makuwa]1.77e-1086.49Show/hide
Query:  MGPYAVDSTIEEVGTSKTPASKPVKQSLRPSTLLEEI
        MGP+ VDSTIEEVGTSKTP SKPV+QSLRPS LLEEI
Subjt:  MGPYAVDSTIEEVGTSKTPASKPVKQSLRPSTLLEEI

KAA0052877.1 hypothetical protein E6C27_scaffold1184G00090 [Cucumis melo var. makuwa]6.09e-14100Show/hide
Query:  MGPYAVDSTIEEVGTSKTPASKPVKQSLRPSTLLEEI
        MGPYAVDSTIEEVGTSKTPASKPVKQSLRPSTLLEEI
Subjt:  MGPYAVDSTIEEVGTSKTPASKPVKQSLRPSTLLEEI

KAA0065436.1 hypothetical protein E6C27_scaffold17G001150 [Cucumis melo var. makuwa]1.84e-1057.38Show/hide
Query:  MGPYAVDSTIEEVGTSKTPASKPVKQSLRPSTLLEEIP--------VHPKEMFVLKNPYRR
        M P+ VDS I+EVGTSKTP SKP+++ L PSTLL+EI         +HPKEM VLK  Y R
Subjt:  MGPYAVDSTIEEVGTSKTPASKPVKQSLRPSTLLEEIP--------VHPKEMFVLKNPYRR

TrEMBL top hitse value%identityAlignment
A0A5A7VGI3 Uncharacterized protein1.1e-0657.38Show/hide
Query:  MGPYAVDSTIEEVGTSKTPASKPVKQSLRPSTLLEEI--------PVHPKEMFVLKNPYRR
        M P+ VDS I+EVGTSKTP SKP+++ L PSTLL+EI         +HPKEM VLK  Y R
Subjt:  MGPYAVDSTIEEVGTSKTPASKPVKQSLRPSTLLEEI--------PVHPKEMFVLKNPYRR

A0A5D3BZ74 Uncharacterized protein3.5e-1367.16Show/hide
Query:  YAVDSTIEEVGTSKTPASKPVKQSLRPSTLLEEI--------PVHPKEMFVLKNPYRRSARHMLPLS
        + +DSTIE VGTSKTP SKP +QSLRPS+LLEEI         +HPKEM  LKNPYRRSAR MLPL+
Subjt:  YAVDSTIEEVGTSKTPASKPVKQSLRPSTLLEEI--------PVHPKEMFVLKNPYRRSARHMLPLS

A0A5D3C6L1 Uncharacterized protein1.4e-0686.11Show/hide
Query:  GPYAVDSTIEEVGTSKTPASKPVKQSLRPSTLLEEI
        GP+AVDSTIE VGTSKTP SKP KQSLRPS LLEEI
Subjt:  GPYAVDSTIEEVGTSKTPASKPVKQSLRPSTLLEEI

A0A5D3C961 Uncharacterized protein1.3e-0786.49Show/hide
Query:  MGPYAVDSTIEEVGTSKTPASKPVKQSLRPSTLLEEI
        MGP+ VDSTIEEVGTSKTP SKPV+QSLRPS LLEEI
Subjt:  MGPYAVDSTIEEVGTSKTPASKPVKQSLRPSTLLEEI

A0A5D3CRJ3 Uncharacterized protein2.8e-10100Show/hide
Query:  MGPYAVDSTIEEVGTSKTPASKPVKQSLRPSTLLEEI
        MGPYAVDSTIEEVGTSKTPASKPVKQSLRPSTLLEEI
Subjt:  MGPYAVDSTIEEVGTSKTPASKPVKQSLRPSTLLEEI

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGACCTTATGCAGTTGATTCGACCATTGAGGAAGTTGGTACCTCGAAGACTCCCGCCTCTAAACCAGTCAAACAGTCCTTACGTCCATCCACTCTTCTCGAGGAGAT
TCCCGTCCATCCAAAGGAGATGTTTGTCCTAAAGAACCCCTACAGAAGGTCAGCTCGACACATGCTCCCCTTAAGTGTTATGAATCGCCTTTAA
mRNA sequenceShow/hide mRNA sequence
ATGGGACCTTATGCAGTTGATTCGACCATTGAGGAAGTTGGTACCTCGAAGACTCCCGCCTCTAAACCAGTCAAACAGTCCTTACGTCCATCCACTCTTCTCGAGGAGAT
TCCCGTCCATCCAAAGGAGATGTTTGTCCTAAAGAACCCCTACAGAAGGTCAGCTCGACACATGCTCCCCTTAAGTGTTATGAATCGCCTTTAA
Protein sequenceShow/hide protein sequence
MGPYAVDSTIEEVGTSKTPASKPVKQSLRPSTLLEEIPVHPKEMFVLKNPYRRSARHMLPLSVMNRL