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IVF0002690 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0002690
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionGag/pol protein
Genome locationchr12:12873225..12873398
RNA-Seq ExpressionIVF0002690
SyntenyIVF0002690
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0035596.1 hypothetical protein E6C27_scaffold285G002700 [Cucumis melo var. makuwa]1.42e-3196.49Show/hide
Query:  MEVVSKFYDASYHPSEFYVTIEGKKVFFDTEAINELYDLPNDAKYPRQTMITKPTKG
        MEVVSKFYDASYHPSEFYVTIEGKKVFFDTEAINELYDLPNDA+YPRQ MITKPTKG
Subjt:  MEVVSKFYDASYHPSEFYVTIEGKKVFFDTEAINELYDLPNDAKYPRQTMITKPTKG

KAA0049901.1 hypothetical protein E6C27_scaffold13G00540 [Cucumis melo var. makuwa]3.75e-1961.4Show/hide
Query:  MEVVSKFYDASYHPSEFYVTIEGKKVFFDTEAINELYDLPNDAKYPRQTMITKPTKG
        ++VV KFYDA YHP++ Y TIE +K++F  EAIN+LYDLPND +YP   +ITKPT+G
Subjt:  MEVVSKFYDASYHPSEFYVTIEGKKVFFDTEAINELYDLPNDAKYPRQTMITKPTKG

KAA0053401.1 hypothetical protein E6C27_scaffold428G00690 [Cucumis melo var. makuwa]4.98e-1555.36Show/hide
Query:  MEVVSKFYDASYHPSEFYVTIEGKKVFFDTEAINELYDLPNDAKYPRQTMITKPTK
        M+ V KFY+  YHP + +VTI+G K+ F+ + I+ELYDLPND +Y RQ +I+KPTK
Subjt:  MEVVSKFYDASYHPSEFYVTIEGKKVFFDTEAINELYDLPNDAKYPRQTMITKPTK

TYK22172.1 hypothetical protein E5676_scaffold333G00320 [Cucumis melo var. makuwa]7.28e-1656.14Show/hide
Query:  MEVVSKFYDASYHPSEFYVTIEGKKVFFDTEAINELYDLPNDAKYPRQTMITKPTKG
        M+VV KF+D +YH +EF V I+G++V+F++E I ELY+LPN+A+YP Q +IT+P KG
Subjt:  MEVVSKFYDASYHPSEFYVTIEGKKVFFDTEAINELYDLPNDAKYPRQTMITKPTKG

TYK30940.1 hypothetical protein E5676_scaffold455G001650 [Cucumis melo var. makuwa]7.16e-3296.49Show/hide
Query:  MEVVSKFYDASYHPSEFYVTIEGKKVFFDTEAINELYDLPNDAKYPRQTMITKPTKG
        MEVVSKFYDASYHPSEFYVTIEGKKVFFDTEAINELYDLPNDA+YPRQ MITKPTKG
Subjt:  MEVVSKFYDASYHPSEFYVTIEGKKVFFDTEAINELYDLPNDAKYPRQTMITKPTKG

TrEMBL top hitse value%identityAlignment
A0A5A7T079 Uncharacterized protein1.9e-2396.49Show/hide
Query:  MEVVSKFYDASYHPSEFYVTIEGKKVFFDTEAINELYDLPNDAKYPRQTMITKPTKG
        MEVVSKFYDASYHPSEFYVTIEGKKVFFDTEAINELYDLPNDA+YPRQ MITKPTKG
Subjt:  MEVVSKFYDASYHPSEFYVTIEGKKVFFDTEAINELYDLPNDAKYPRQTMITKPTKG

A0A5A7U8H4 Uncharacterized protein1.7e-1361.4Show/hide
Query:  MEVVSKFYDASYHPSEFYVTIEGKKVFFDTEAINELYDLPNDAKYPRQTMITKPTKG
        ++VV KFYDA YHP++ Y TIE +K++F  EAIN+LYDLPND +YP   +ITKPT+G
Subjt:  MEVVSKFYDASYHPSEFYVTIEGKKVFFDTEAINELYDLPNDAKYPRQTMITKPTKG

A0A5A7UIL5 Uncharacterized protein1.1e-1055.36Show/hide
Query:  MEVVSKFYDASYHPSEFYVTIEGKKVFFDTEAINELYDLPNDAKYPRQTMITKPTK
        M+ V KFY+  YHP + +VTI+G K+ F+ + I+ELYDLPND +Y RQ +I+KPTK
Subjt:  MEVVSKFYDASYHPSEFYVTIEGKKVFFDTEAINELYDLPNDAKYPRQTMITKPTK

A0A5D3DF10 Uncharacterized protein4.8e-1156.14Show/hide
Query:  MEVVSKFYDASYHPSEFYVTIEGKKVFFDTEAINELYDLPNDAKYPRQTMITKPTKG
        M+VV KF+D +YH +EF V I+G++V+F++E I ELY+LPN+A+YP Q +IT+P KG
Subjt:  MEVVSKFYDASYHPSEFYVTIEGKKVFFDTEAINELYDLPNDAKYPRQTMITKPTKG

A0A5D3E5P6 Uncharacterized protein1.9e-2396.49Show/hide
Query:  MEVVSKFYDASYHPSEFYVTIEGKKVFFDTEAINELYDLPNDAKYPRQTMITKPTKG
        MEVVSKFYDASYHPSEFYVTIEGKKVFFDTEAINELYDLPNDA+YPRQ MITKPTKG
Subjt:  MEVVSKFYDASYHPSEFYVTIEGKKVFFDTEAINELYDLPNDAKYPRQTMITKPTKG

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAAGTGGTTAGCAAGTTCTATGATGCAAGTTACCATCCATCCGAGTTTTATGTGACAATAGAAGGCAAAAAGGTTTTCTTCGACACCGAGGCCATCAATGAACTTTA
CGACCTACCCAATGATGCAAAGTACCCGAGACAGACGATGATCACTAAGCCTACAAAGGGGTAA
mRNA sequenceShow/hide mRNA sequence
ATGGAAGTGGTTAGCAAGTTCTATGATGCAAGTTACCATCCATCCGAGTTTTATGTGACAATAGAAGGCAAAAAGGTTTTCTTCGACACCGAGGCCATCAATGAACTTTA
CGACCTACCCAATGATGCAAAGTACCCGAGACAGACGATGATCACTAAGCCTACAAAGGGGTAA
Protein sequenceShow/hide protein sequence
MEVVSKFYDASYHPSEFYVTIEGKKVFFDTEAINELYDLPNDAKYPRQTMITKPTKG