| GenBank top hits | e value | %identity | Alignment |
|---|
| XP_004135336.1 U5 small nuclear ribonucleoprotein 40 kDa protein [Cucumis sativus] | 1.82e-262 | 99.13 | Show/hide |
Query: MQVPSEGENALATVGPRPMEWSTVPYNPPQGPGPNGKQRTSSLESPIMLLSGHQSAIYTLKFNPDGNVIASGSHDKEIFLWNVHGDCKNFMVLRGHKNAV
MQVPSEGENALATVGPRPMEWSTVPYNPPQGPGPN KQRTSSLESPIMLLSGHQSAIYTLKFNPDGNV+ASGSHDKEIFLWNVHGDCKNFMVLRGHKNAV
Subjt: MQVPSEGENALATVGPRPMEWSTVPYNPPQGPGPNGKQRTSSLESPIMLLSGHQSAIYTLKFNPDGNVIASGSHDKEIFLWNVHGDCKNFMVLRGHKNAV
Query: LDLHWTVDGSQIVSASPDKTLRAWDVETGKQIKKMAEHSSFVNSCCPTRRGPPLIVSGSDDGTAKLWDMRQRGAIQTFPDKYQITAVSFSDASDKIFTGG
LDLHWTVDGSQIVSASPDKTLRAWDVETGKQIKKMAEHSSFVNSCCPTRRGPPLIVSGSDDGTAKLWDMRQRGAIQTFPDKYQITAVSFSDASDKIFTGG
Subjt: LDLHWTVDGSQIVSASPDKTLRAWDVETGKQIKKMAEHSSFVNSCCPTRRGPPLIVSGSDDGTAKLWDMRQRGAIQTFPDKYQITAVSFSDASDKIFTGG
Query: IDNDVKVWDLRKGEVMMTLQGHQDMITGMQLSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKIFEGHQHNFEKNLLKCSWSADGSKVTAGSSDRMVYIW
IDNDVKVWDLRKGEVMMTLQGHQDMITGMQLSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKIFEGHQHNFEKNLLKCSWSADGSKVTAGSSDRMVYIW
Subjt: IDNDVKVWDLRKGEVMMTLQGHQDMITGMQLSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKIFEGHQHNFEKNLLKCSWSADGSKVTAGSSDRMVYIW
Query: DTTSRRILYKLPGHTGSVNECVFHPSEPIVASCSSDKQIYLGEI
DTTSRRILYKLPGHTGSVNECVFHPSEPIVASC SDKQIYLGEI
Subjt: DTTSRRILYKLPGHTGSVNECVFHPSEPIVASCSSDKQIYLGEI
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| XP_008446018.1 PREDICTED: U5 small nuclear ribonucleoprotein 40 kDa protein [Cucumis melo] | 1.33e-264 | 100 | Show/hide |
Query: MQVPSEGENALATVGPRPMEWSTVPYNPPQGPGPNGKQRTSSLESPIMLLSGHQSAIYTLKFNPDGNVIASGSHDKEIFLWNVHGDCKNFMVLRGHKNAV
MQVPSEGENALATVGPRPMEWSTVPYNPPQGPGPNGKQRTSSLESPIMLLSGHQSAIYTLKFNPDGNVIASGSHDKEIFLWNVHGDCKNFMVLRGHKNAV
Subjt: MQVPSEGENALATVGPRPMEWSTVPYNPPQGPGPNGKQRTSSLESPIMLLSGHQSAIYTLKFNPDGNVIASGSHDKEIFLWNVHGDCKNFMVLRGHKNAV
Query: LDLHWTVDGSQIVSASPDKTLRAWDVETGKQIKKMAEHSSFVNSCCPTRRGPPLIVSGSDDGTAKLWDMRQRGAIQTFPDKYQITAVSFSDASDKIFTGG
LDLHWTVDGSQIVSASPDKTLRAWDVETGKQIKKMAEHSSFVNSCCPTRRGPPLIVSGSDDGTAKLWDMRQRGAIQTFPDKYQITAVSFSDASDKIFTGG
Subjt: LDLHWTVDGSQIVSASPDKTLRAWDVETGKQIKKMAEHSSFVNSCCPTRRGPPLIVSGSDDGTAKLWDMRQRGAIQTFPDKYQITAVSFSDASDKIFTGG
Query: IDNDVKVWDLRKGEVMMTLQGHQDMITGMQLSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKIFEGHQHNFEKNLLKCSWSADGSKVTAGSSDRMVYIW
IDNDVKVWDLRKGEVMMTLQGHQDMITGMQLSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKIFEGHQHNFEKNLLKCSWSADGSKVTAGSSDRMVYIW
Subjt: IDNDVKVWDLRKGEVMMTLQGHQDMITGMQLSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKIFEGHQHNFEKNLLKCSWSADGSKVTAGSSDRMVYIW
Query: DTTSRRILYKLPGHTGSVNECVFHPSEPIVASCSSDKQIYLGEI
DTTSRRILYKLPGHTGSVNECVFHPSEPIVASCSSDKQIYLGEI
Subjt: DTTSRRILYKLPGHTGSVNECVFHPSEPIVASCSSDKQIYLGEI
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| XP_022945717.1 U5 small nuclear ribonucleoprotein 40 kDa protein [Cucurbita moschata] | 2.78e-257 | 97.09 | Show/hide |
Query: MQVPSEGENALATVGPRPMEWSTVPYNPPQGPGPNGKQRTSSLESPIMLLSGHQSAIYTLKFNPDGNVIASGSHDKEIFLWNVHGDCKNFMVLRGHKNAV
MQVPS GENALATVGPRPMEWSTVPYN PQGPGPNGKQRTSSLESPIMLL+GHQSAIYTLKFNP G+VIASGSHDKEIFLWNVHGDCKN+MVLRGHKNAV
Subjt: MQVPSEGENALATVGPRPMEWSTVPYNPPQGPGPNGKQRTSSLESPIMLLSGHQSAIYTLKFNPDGNVIASGSHDKEIFLWNVHGDCKNFMVLRGHKNAV
Query: LDLHWTVDGSQIVSASPDKTLRAWDVETGKQIKKMAEHSSFVNSCCPTRRGPPLIVSGSDDGTAKLWDMRQRGAIQTFPDKYQITAVSFSDASDKIFTGG
LDLHWT DGSQIVSASPDKTLRAWDVETGKQIKKMAEHSSFVNSCCPTRRGPPLIVSGSDDGTAKLWDMRQRGAIQTFPDKYQITAVSFSDASDKIFTGG
Subjt: LDLHWTVDGSQIVSASPDKTLRAWDVETGKQIKKMAEHSSFVNSCCPTRRGPPLIVSGSDDGTAKLWDMRQRGAIQTFPDKYQITAVSFSDASDKIFTGG
Query: IDNDVKVWDLRKGEVMMTLQGHQDMITGMQLSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKIFEGHQHNFEKNLLKCSWSADGSKVTAGSSDRMVYIW
IDNDVKVWDLRKGEVMMTLQGHQDMITGMQLSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKIFEGHQHNFEKNLLKCSWS DGSKVTAGSSDRMVY+W
Subjt: IDNDVKVWDLRKGEVMMTLQGHQDMITGMQLSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKIFEGHQHNFEKNLLKCSWSADGSKVTAGSSDRMVYIW
Query: DTTSRRILYKLPGHTGSVNECVFHPSEPIVASCSSDKQIYLGEI
DTTSRRILYKLPGHTGSVNECVFHPSEPIV SCSSDKQIYLGEI
Subjt: DTTSRRILYKLPGHTGSVNECVFHPSEPIVASCSSDKQIYLGEI
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| XP_022966914.1 U5 small nuclear ribonucleoprotein 40 kDa protein [Cucurbita maxima] | 2.78e-257 | 97.09 | Show/hide |
Query: MQVPSEGENALATVGPRPMEWSTVPYNPPQGPGPNGKQRTSSLESPIMLLSGHQSAIYTLKFNPDGNVIASGSHDKEIFLWNVHGDCKNFMVLRGHKNAV
MQVPS GENALATVGPRPMEWSTVPYN PQGPGPNGKQRTSSLESPIMLL+GHQSAIYTLKFNP G+VIASGSHDKEIFLWNVHGDCKN+MVLRGHKNAV
Subjt: MQVPSEGENALATVGPRPMEWSTVPYNPPQGPGPNGKQRTSSLESPIMLLSGHQSAIYTLKFNPDGNVIASGSHDKEIFLWNVHGDCKNFMVLRGHKNAV
Query: LDLHWTVDGSQIVSASPDKTLRAWDVETGKQIKKMAEHSSFVNSCCPTRRGPPLIVSGSDDGTAKLWDMRQRGAIQTFPDKYQITAVSFSDASDKIFTGG
LDLHWT DGSQIVSASPDKTLRAWDVETGKQIKKMAEHSSFVNSCCPTRRGPPLIVSGSDDGTAKLWDMRQRGAIQTFPDKYQITAVSFSDASDKIFTGG
Subjt: LDLHWTVDGSQIVSASPDKTLRAWDVETGKQIKKMAEHSSFVNSCCPTRRGPPLIVSGSDDGTAKLWDMRQRGAIQTFPDKYQITAVSFSDASDKIFTGG
Query: IDNDVKVWDLRKGEVMMTLQGHQDMITGMQLSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKIFEGHQHNFEKNLLKCSWSADGSKVTAGSSDRMVYIW
IDNDVKVWDLRKGEVMMTLQGHQDMITGMQLSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKIFEGHQHNFEKNLLKCSWS DGSKVTAGSSDRMVY+W
Subjt: IDNDVKVWDLRKGEVMMTLQGHQDMITGMQLSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKIFEGHQHNFEKNLLKCSWSADGSKVTAGSSDRMVYIW
Query: DTTSRRILYKLPGHTGSVNECVFHPSEPIVASCSSDKQIYLGEI
DTTSRRILYKLPGHTGSVNECVFHPSEPIV SCSSDKQIYLGEI
Subjt: DTTSRRILYKLPGHTGSVNECVFHPSEPIVASCSSDKQIYLGEI
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| XP_038877892.1 U5 small nuclear ribonucleoprotein 40 kDa protein [Benincasa hispida] | 4.11e-259 | 98.26 | Show/hide |
Query: MQVPSEGENALATVGPRPMEWSTVPYNPPQGPGPNGKQRTSSLESPIMLLSGHQSAIYTLKFNPDGNVIASGSHDKEIFLWNVHGDCKNFMVLRGHKNAV
MQVPSEGENALATVGPRPMEWSTVPYN PQG GPNGKQR SSLESPIMLLSGHQSAIYTLKFNPDGNVIASGSHDKEIFLWNV GDCKNFMVLRGHKNAV
Subjt: MQVPSEGENALATVGPRPMEWSTVPYNPPQGPGPNGKQRTSSLESPIMLLSGHQSAIYTLKFNPDGNVIASGSHDKEIFLWNVHGDCKNFMVLRGHKNAV
Query: LDLHWTVDGSQIVSASPDKTLRAWDVETGKQIKKMAEHSSFVNSCCPTRRGPPLIVSGSDDGTAKLWDMRQRGAIQTFPDKYQITAVSFSDASDKIFTGG
LDLHWT+DGSQIVSASPDKTLRAWDVE+GKQIKKMAEHSSFVNSCCPTRRGPPLIVSGSDDGTAKLWDMRQRGAIQTFPDKYQITAVSFSDASDKIFTGG
Subjt: LDLHWTVDGSQIVSASPDKTLRAWDVETGKQIKKMAEHSSFVNSCCPTRRGPPLIVSGSDDGTAKLWDMRQRGAIQTFPDKYQITAVSFSDASDKIFTGG
Query: IDNDVKVWDLRKGEVMMTLQGHQDMITGMQLSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKIFEGHQHNFEKNLLKCSWSADGSKVTAGSSDRMVYIW
IDNDVKVWDLRKGEVMMTLQGHQDMITGMQLSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKIFEGHQHNFEKNLLKCSWSADGSKVTAGSSDRMVYIW
Subjt: IDNDVKVWDLRKGEVMMTLQGHQDMITGMQLSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKIFEGHQHNFEKNLLKCSWSADGSKVTAGSSDRMVYIW
Query: DTTSRRILYKLPGHTGSVNECVFHPSEPIVASCSSDKQIYLGEI
DTTSRRILYKLPGHTGSVNECVFHPSEPIVASCSSDKQIYLGEI
Subjt: DTTSRRILYKLPGHTGSVNECVFHPSEPIVASCSSDKQIYLGEI
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| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A0A0KTB1 WD_REPEATS_REGION domain-containing protein | 1.4e-206 | 99.13 | Show/hide |
Query: MQVPSEGENALATVGPRPMEWSTVPYNPPQGPGPNGKQRTSSLESPIMLLSGHQSAIYTLKFNPDGNVIASGSHDKEIFLWNVHGDCKNFMVLRGHKNAV
MQVPSEGENALATVGPRPMEWSTVPYNPPQGPGPN KQRTSSLESPIMLLSGHQSAIYTLKFNPDGNV+ASGSHDKEIFLWNVHGDCKNFMVLRGHKNAV
Subjt: MQVPSEGENALATVGPRPMEWSTVPYNPPQGPGPNGKQRTSSLESPIMLLSGHQSAIYTLKFNPDGNVIASGSHDKEIFLWNVHGDCKNFMVLRGHKNAV
Query: LDLHWTVDGSQIVSASPDKTLRAWDVETGKQIKKMAEHSSFVNSCCPTRRGPPLIVSGSDDGTAKLWDMRQRGAIQTFPDKYQITAVSFSDASDKIFTGG
LDLHWTVDGSQIVSASPDKTLRAWDVETGKQIKKMAEHSSFVNSCCPTRRGPPLIVSGSDDGTAKLWDMRQRGAIQTFPDKYQITAVSFSDASDKIFTGG
Subjt: LDLHWTVDGSQIVSASPDKTLRAWDVETGKQIKKMAEHSSFVNSCCPTRRGPPLIVSGSDDGTAKLWDMRQRGAIQTFPDKYQITAVSFSDASDKIFTGG
Query: IDNDVKVWDLRKGEVMMTLQGHQDMITGMQLSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKIFEGHQHNFEKNLLKCSWSADGSKVTAGSSDRMVYIW
IDNDVKVWDLRKGEVMMTLQGHQDMITGMQLSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKIFEGHQHNFEKNLLKCSWSADGSKVTAGSSDRMVYIW
Subjt: IDNDVKVWDLRKGEVMMTLQGHQDMITGMQLSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKIFEGHQHNFEKNLLKCSWSADGSKVTAGSSDRMVYIW
Query: DTTSRRILYKLPGHTGSVNECVFHPSEPIVASCSSDKQIYLGEI
DTTSRRILYKLPGHTGSVNECVFHPSEPIVASC SDKQIYLGEI
Subjt: DTTSRRILYKLPGHTGSVNECVFHPSEPIVASCSSDKQIYLGEI
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| A0A1S3BDK5 U5 small nuclear ribonucleoprotein 40 kDa protein | 3.3e-208 | 100 | Show/hide |
Query: MQVPSEGENALATVGPRPMEWSTVPYNPPQGPGPNGKQRTSSLESPIMLLSGHQSAIYTLKFNPDGNVIASGSHDKEIFLWNVHGDCKNFMVLRGHKNAV
MQVPSEGENALATVGPRPMEWSTVPYNPPQGPGPNGKQRTSSLESPIMLLSGHQSAIYTLKFNPDGNVIASGSHDKEIFLWNVHGDCKNFMVLRGHKNAV
Subjt: MQVPSEGENALATVGPRPMEWSTVPYNPPQGPGPNGKQRTSSLESPIMLLSGHQSAIYTLKFNPDGNVIASGSHDKEIFLWNVHGDCKNFMVLRGHKNAV
Query: LDLHWTVDGSQIVSASPDKTLRAWDVETGKQIKKMAEHSSFVNSCCPTRRGPPLIVSGSDDGTAKLWDMRQRGAIQTFPDKYQITAVSFSDASDKIFTGG
LDLHWTVDGSQIVSASPDKTLRAWDVETGKQIKKMAEHSSFVNSCCPTRRGPPLIVSGSDDGTAKLWDMRQRGAIQTFPDKYQITAVSFSDASDKIFTGG
Subjt: LDLHWTVDGSQIVSASPDKTLRAWDVETGKQIKKMAEHSSFVNSCCPTRRGPPLIVSGSDDGTAKLWDMRQRGAIQTFPDKYQITAVSFSDASDKIFTGG
Query: IDNDVKVWDLRKGEVMMTLQGHQDMITGMQLSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKIFEGHQHNFEKNLLKCSWSADGSKVTAGSSDRMVYIW
IDNDVKVWDLRKGEVMMTLQGHQDMITGMQLSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKIFEGHQHNFEKNLLKCSWSADGSKVTAGSSDRMVYIW
Subjt: IDNDVKVWDLRKGEVMMTLQGHQDMITGMQLSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKIFEGHQHNFEKNLLKCSWSADGSKVTAGSSDRMVYIW
Query: DTTSRRILYKLPGHTGSVNECVFHPSEPIVASCSSDKQIYLGEI
DTTSRRILYKLPGHTGSVNECVFHPSEPIVASCSSDKQIYLGEI
Subjt: DTTSRRILYKLPGHTGSVNECVFHPSEPIVASCSSDKQIYLGEI
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| A0A5A7SYI1 U5 small nuclear ribonucleoprotein 40 kDa protein | 3.3e-208 | 100 | Show/hide |
Query: MQVPSEGENALATVGPRPMEWSTVPYNPPQGPGPNGKQRTSSLESPIMLLSGHQSAIYTLKFNPDGNVIASGSHDKEIFLWNVHGDCKNFMVLRGHKNAV
MQVPSEGENALATVGPRPMEWSTVPYNPPQGPGPNGKQRTSSLESPIMLLSGHQSAIYTLKFNPDGNVIASGSHDKEIFLWNVHGDCKNFMVLRGHKNAV
Subjt: MQVPSEGENALATVGPRPMEWSTVPYNPPQGPGPNGKQRTSSLESPIMLLSGHQSAIYTLKFNPDGNVIASGSHDKEIFLWNVHGDCKNFMVLRGHKNAV
Query: LDLHWTVDGSQIVSASPDKTLRAWDVETGKQIKKMAEHSSFVNSCCPTRRGPPLIVSGSDDGTAKLWDMRQRGAIQTFPDKYQITAVSFSDASDKIFTGG
LDLHWTVDGSQIVSASPDKTLRAWDVETGKQIKKMAEHSSFVNSCCPTRRGPPLIVSGSDDGTAKLWDMRQRGAIQTFPDKYQITAVSFSDASDKIFTGG
Subjt: LDLHWTVDGSQIVSASPDKTLRAWDVETGKQIKKMAEHSSFVNSCCPTRRGPPLIVSGSDDGTAKLWDMRQRGAIQTFPDKYQITAVSFSDASDKIFTGG
Query: IDNDVKVWDLRKGEVMMTLQGHQDMITGMQLSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKIFEGHQHNFEKNLLKCSWSADGSKVTAGSSDRMVYIW
IDNDVKVWDLRKGEVMMTLQGHQDMITGMQLSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKIFEGHQHNFEKNLLKCSWSADGSKVTAGSSDRMVYIW
Subjt: IDNDVKVWDLRKGEVMMTLQGHQDMITGMQLSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKIFEGHQHNFEKNLLKCSWSADGSKVTAGSSDRMVYIW
Query: DTTSRRILYKLPGHTGSVNECVFHPSEPIVASCSSDKQIYLGEI
DTTSRRILYKLPGHTGSVNECVFHPSEPIVASCSSDKQIYLGEI
Subjt: DTTSRRILYKLPGHTGSVNECVFHPSEPIVASCSSDKQIYLGEI
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| A0A6J1G1Q0 U5 small nuclear ribonucleoprotein 40 kDa protein | 1.2e-202 | 97.09 | Show/hide |
Query: MQVPSEGENALATVGPRPMEWSTVPYNPPQGPGPNGKQRTSSLESPIMLLSGHQSAIYTLKFNPDGNVIASGSHDKEIFLWNVHGDCKNFMVLRGHKNAV
MQVPS GENALATVGPRPMEWSTVPYN PQGPGPNGKQRTSSLESPIMLL+GHQSAIYTLKFNP G+VIASGSHDKEIFLWNVHGDCKN+MVLRGHKNAV
Subjt: MQVPSEGENALATVGPRPMEWSTVPYNPPQGPGPNGKQRTSSLESPIMLLSGHQSAIYTLKFNPDGNVIASGSHDKEIFLWNVHGDCKNFMVLRGHKNAV
Query: LDLHWTVDGSQIVSASPDKTLRAWDVETGKQIKKMAEHSSFVNSCCPTRRGPPLIVSGSDDGTAKLWDMRQRGAIQTFPDKYQITAVSFSDASDKIFTGG
LDLHWT DGSQIVSASPDKTLRAWDVETGKQIKKMAEHSSFVNSCCPTRRGPPLIVSGSDDGTAKLWDMRQRGAIQTFPDKYQITAVSFSDASDKIFTGG
Subjt: LDLHWTVDGSQIVSASPDKTLRAWDVETGKQIKKMAEHSSFVNSCCPTRRGPPLIVSGSDDGTAKLWDMRQRGAIQTFPDKYQITAVSFSDASDKIFTGG
Query: IDNDVKVWDLRKGEVMMTLQGHQDMITGMQLSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKIFEGHQHNFEKNLLKCSWSADGSKVTAGSSDRMVYIW
IDNDVKVWDLRKGEVMMTLQGHQDMITGMQLSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKIFEGHQHNFEKNLLKCSWS DGSKVTAGSSDRMVY+W
Subjt: IDNDVKVWDLRKGEVMMTLQGHQDMITGMQLSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKIFEGHQHNFEKNLLKCSWSADGSKVTAGSSDRMVYIW
Query: DTTSRRILYKLPGHTGSVNECVFHPSEPIVASCSSDKQIYLGEI
DTTSRRILYKLPGHTGSVNECVFHPSEPIV SCSSDKQIYLGEI
Subjt: DTTSRRILYKLPGHTGSVNECVFHPSEPIVASCSSDKQIYLGEI
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| A0A6J1HV60 U5 small nuclear ribonucleoprotein 40 kDa protein | 1.2e-202 | 97.09 | Show/hide |
Query: MQVPSEGENALATVGPRPMEWSTVPYNPPQGPGPNGKQRTSSLESPIMLLSGHQSAIYTLKFNPDGNVIASGSHDKEIFLWNVHGDCKNFMVLRGHKNAV
MQVPS GENALATVGPRPMEWSTVPYN PQGPGPNGKQRTSSLESPIMLL+GHQSAIYTLKFNP G+VIASGSHDKEIFLWNVHGDCKN+MVLRGHKNAV
Subjt: MQVPSEGENALATVGPRPMEWSTVPYNPPQGPGPNGKQRTSSLESPIMLLSGHQSAIYTLKFNPDGNVIASGSHDKEIFLWNVHGDCKNFMVLRGHKNAV
Query: LDLHWTVDGSQIVSASPDKTLRAWDVETGKQIKKMAEHSSFVNSCCPTRRGPPLIVSGSDDGTAKLWDMRQRGAIQTFPDKYQITAVSFSDASDKIFTGG
LDLHWT DGSQIVSASPDKTLRAWDVETGKQIKKMAEHSSFVNSCCPTRRGPPLIVSGSDDGTAKLWDMRQRGAIQTFPDKYQITAVSFSDASDKIFTGG
Subjt: LDLHWTVDGSQIVSASPDKTLRAWDVETGKQIKKMAEHSSFVNSCCPTRRGPPLIVSGSDDGTAKLWDMRQRGAIQTFPDKYQITAVSFSDASDKIFTGG
Query: IDNDVKVWDLRKGEVMMTLQGHQDMITGMQLSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKIFEGHQHNFEKNLLKCSWSADGSKVTAGSSDRMVYIW
IDNDVKVWDLRKGEVMMTLQGHQDMITGMQLSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKIFEGHQHNFEKNLLKCSWS DGSKVTAGSSDRMVY+W
Subjt: IDNDVKVWDLRKGEVMMTLQGHQDMITGMQLSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKIFEGHQHNFEKNLLKCSWSADGSKVTAGSSDRMVYIW
Query: DTTSRRILYKLPGHTGSVNECVFHPSEPIVASCSSDKQIYLGEI
DTTSRRILYKLPGHTGSVNECVFHPSEPIV SCSSDKQIYLGEI
Subjt: DTTSRRILYKLPGHTGSVNECVFHPSEPIVASCSSDKQIYLGEI
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| SwissProt top hits | e value | %identity | Alignment |
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| Q2HJH6 U5 small nuclear ribonucleoprotein 40 kDa protein | 3.2e-123 | 60.52 | Show/hide |
Query: GKQRTSSLESPIMLLSGHQSAIYTLKFNPDGNVIASGSHDKEIFLWNVHGDCKNFMVLRGHKNAVLDLHWTVDGSQIVSASPDKTLRAWDVETGKQIKKM
G R SSL++PIMLLSGH+ +Y KF+P+G+ +AS D+ I LWNV+GDC N+ L+GH AV++LH+ DGS + SAS DKT+ WD ETG+++K++
Subjt: GKQRTSSLESPIMLLSGHQSAIYTLKFNPDGNVIASGSHDKEIFLWNVHGDCKNFMVLRGHKNAVLDLHWTVDGSQIVSASPDKTLRAWDVETGKQIKKM
Query: AEHSSFVNSCCPTRRGPPLIVSGSDDGTAKLWDMRQRGAIQTFPDKYQITAVSFSDASDKIFTGGIDNDVKVWDLRKGEVMMTLQGHQDMITGMQLSPDG
H+SFVNSC P RRGP L+ +GSDDGT KLWD+R++ AIQTF + YQ+ AV+F+D SD+I +GGIDND+KVWDLR+ ++ T++GH D +TG+ LS +G
Subjt: AEHSSFVNSCCPTRRGPPLIVSGSDDGTAKLWDMRQRGAIQTFPDKYQITAVSFSDASDKIFTGGIDNDVKVWDLRKGEVMMTLQGHQDMITGMQLSPDG
Query: SYLLTNGMDCKLCIWDMRPYAPQNRCVKIFEGHQHNFEKNLLKCSWSADGSKVTAGSSDRMVYIWDTTSRRILYKLPGHTGSVNECVFHPSEPIVASCSS
SYLL+N MD + +WD+RP+AP+ RCV+IF+G+ HNFEKNLL+CSWS DGSK+ AGS+DR VY+WDTTSRRILYKLPGH GS+NE FHP EPI+ S SS
Subjt: SYLLTNGMDCKLCIWDMRPYAPQNRCVKIFEGHQHNFEKNLLKCSWSADGSKVTAGSSDRMVYIWDTTSRRILYKLPGHTGSVNECVFHPSEPIVASCSS
Query: DKQIYLGEI
DK++Y+GEI
Subjt: DKQIYLGEI
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| Q55AR8 U5 small nuclear ribonucleoprotein 40 kDa protein | 1.2e-111 | 57.74 | Show/hide |
Query: GKQRTSSLESPIMLLSGHQSAIYTLKFNPDGNVIASGSHDKEIFLWNVHGDCKNFMVLRGHKNAVLDLHWTVDGSQIVSASPDKTLRAWDVETGKQIKKM
G +RTS LE PIM L GH+ IY+ KFN G +ASG DKEIFLWNV+G+C N+ VL+GHK +L+LHW+ D ++I +A DK++ WD G+ IK++
Subjt: GKQRTSSLESPIMLLSGHQSAIYTLKFNPDGNVIASGSHDKEIFLWNVHGDCKNFMVLRGHKNAVLDLHWTVDGSQIVSASPDKTLRAWDVETGKQIKKM
Query: AEHSSFVNSCCPTRRGPPLIVSGSDDGTAKLWDMRQRGAIQTFPDKYQITAVSFSDASDKIFTGGIDNDVKVWDLRKGE-VMMTLQGHQDMITGMQLSPD
EHS VNSCCP RRGPPL+ SGSDD +A+++D R +G+ F KY +T+V FSDASD++ TGGIDN ++VWD+R E + TL HQD IT +S D
Subjt: AEHSSFVNSCCPTRRGPPLIVSGSDDGTAKLWDMRQRGAIQTFPDKYQITAVSFSDASDKIFTGGIDNDVKVWDLRKGE-VMMTLQGHQDMITGMQLSPD
Query: GSYLLTNGMDCKLCIWDMRPYAPQNRCVKIFEGHQHNFEKNLLKCSWSADGSKVTAGSSDRMVYIWDTTSRRILYKLPGHTGSVNECVFHPSEPIVASCS
G+YLL+N MD IWD+RPYAP NR +K F G Q+NFEKNL+K SWS DG ++ GSSDR VYIWDT ++++ Y LPGH+G+VNE FHP+EPI+ASCS
Subjt: GSYLLTNGMDCKLCIWDMRPYAPQNRCVKIFEGHQHNFEKNLLKCSWSADGSKVTAGSSDRMVYIWDTTSRRILYKLPGHTGSVNECVFHPSEPIVASCS
Query: SDKQIYLGEI
SDK IYLGEI
Subjt: SDKQIYLGEI
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| Q5RF51 U5 small nuclear ribonucleoprotein 40 kDa protein | 1.3e-121 | 60.19 | Show/hide |
Query: GKQRTSSLESPIMLLSGHQSAIYTLKFNPDGNVIASGSHDKEIFLWNVHGDCKNFMVLRGHKNAVLDLHWTVDGSQIVSASPDKTLRAWDVETGKQIKKM
G R SSL++PIMLLSGH+ +Y KF+P+G+ +AS D+ I LWNV+GDC N+ L+G+ AV++LH+ DGS + SAS DKT+ WD ETG+++K++
Subjt: GKQRTSSLESPIMLLSGHQSAIYTLKFNPDGNVIASGSHDKEIFLWNVHGDCKNFMVLRGHKNAVLDLHWTVDGSQIVSASPDKTLRAWDVETGKQIKKM
Query: AEHSSFVNSCCPTRRGPPLIVSGSDDGTAKLWDMRQRGAIQTFPDKYQITAVSFSDASDKIFTGGIDNDVKVWDLRKGEVMMTLQGHQDMITGMQLSPDG
H+SFVNSC P RRGP L+ +GSDDGT KLWD+R++ AIQTF + YQ+ AV+F+D SD+I +GGIDND+KVWDLR+ ++ T++GH D +TG+ LS +G
Subjt: AEHSSFVNSCCPTRRGPPLIVSGSDDGTAKLWDMRQRGAIQTFPDKYQITAVSFSDASDKIFTGGIDNDVKVWDLRKGEVMMTLQGHQDMITGMQLSPDG
Query: SYLLTNGMDCKLCIWDMRPYAPQNRCVKIFEGHQHNFEKNLLKCSWSADGSKVTAGSSDRMVYIWDTTSRRILYKLPGHTGSVNECVFHPSEPIVASCSS
SYLL+N MD + +WD+RP+AP+ RCVKIF+G+ HNFEKNLL+CSWS DGSK+ AGS+DR V +WDTTSRRILYKLPGH GS+NE FHP EPI+ S SS
Subjt: SYLLTNGMDCKLCIWDMRPYAPQNRCVKIFEGHQHNFEKNLLKCSWSADGSKVTAGSSDRMVYIWDTTSRRILYKLPGHTGSVNECVFHPSEPIVASCSS
Query: DKQIYLGEI
DK++Y+GEI
Subjt: DKQIYLGEI
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| Q6PE01 U5 small nuclear ribonucleoprotein 40 kDa protein | 2.4e-123 | 60.19 | Show/hide |
Query: GKQRTSSLESPIMLLSGHQSAIYTLKFNPDGNVIASGSHDKEIFLWNVHGDCKNFMVLRGHKNAVLDLHWTVDGSQIVSASPDKTLRAWDVETGKQIKKM
G R SSL++PIMLLSGH+ +Y KF+P+G+ +AS D+ I LWNV+GDC N+ L+GH AV++LH+ DGS + SAS DKT+ WD ETG+++K++
Subjt: GKQRTSSLESPIMLLSGHQSAIYTLKFNPDGNVIASGSHDKEIFLWNVHGDCKNFMVLRGHKNAVLDLHWTVDGSQIVSASPDKTLRAWDVETGKQIKKM
Query: AEHSSFVNSCCPTRRGPPLIVSGSDDGTAKLWDMRQRGAIQTFPDKYQITAVSFSDASDKIFTGGIDNDVKVWDLRKGEVMMTLQGHQDMITGMQLSPDG
H+SFVNSC P RRGP L+ +GSDDGT KLWD+R++ A+QTF + YQ+ AV+F+D SD+I +GGIDND+KVWDLR+ ++ T++GH D +TG+ LS +G
Subjt: AEHSSFVNSCCPTRRGPPLIVSGSDDGTAKLWDMRQRGAIQTFPDKYQITAVSFSDASDKIFTGGIDNDVKVWDLRKGEVMMTLQGHQDMITGMQLSPDG
Query: SYLLTNGMDCKLCIWDMRPYAPQNRCVKIFEGHQHNFEKNLLKCSWSADGSKVTAGSSDRMVYIWDTTSRRILYKLPGHTGSVNECVFHPSEPIVASCSS
SYLL+N MD + +WD+RP+AP+ RCVKIF+G+ HNFEKNLL+CSWS DGSK+ AGS+DR VY+WDTTSRR+LYKLPGH GS+NE FHP EPI+ S SS
Subjt: SYLLTNGMDCKLCIWDMRPYAPQNRCVKIFEGHQHNFEKNLLKCSWSADGSKVTAGSSDRMVYIWDTTSRRILYKLPGHTGSVNECVFHPSEPIVASCSS
Query: DKQIYLGEI
DK++Y+GEI
Subjt: DKQIYLGEI
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| Q96DI7 U5 small nuclear ribonucleoprotein 40 kDa protein | 1.4e-123 | 60.84 | Show/hide |
Query: GKQRTSSLESPIMLLSGHQSAIYTLKFNPDGNVIASGSHDKEIFLWNVHGDCKNFMVLRGHKNAVLDLHWTVDGSQIVSASPDKTLRAWDVETGKQIKKM
G R SSL++PIMLLSGH+ +Y KF+P+G+ +AS D+ I LWNV+GDC N+ L+GH AV++LH+ DGS + SAS DKT+ WD ETG+++K++
Subjt: GKQRTSSLESPIMLLSGHQSAIYTLKFNPDGNVIASGSHDKEIFLWNVHGDCKNFMVLRGHKNAVLDLHWTVDGSQIVSASPDKTLRAWDVETGKQIKKM
Query: AEHSSFVNSCCPTRRGPPLIVSGSDDGTAKLWDMRQRGAIQTFPDKYQITAVSFSDASDKIFTGGIDNDVKVWDLRKGEVMMTLQGHQDMITGMQLSPDG
H+SFVNSC P RRGP L+ +GSDDGT KLWD+R++ AIQTF + YQ+ AV+F+D SD+I +GGIDND+KVWDLR+ ++ T++GH D +TG+ LS +G
Subjt: AEHSSFVNSCCPTRRGPPLIVSGSDDGTAKLWDMRQRGAIQTFPDKYQITAVSFSDASDKIFTGGIDNDVKVWDLRKGEVMMTLQGHQDMITGMQLSPDG
Query: SYLLTNGMDCKLCIWDMRPYAPQNRCVKIFEGHQHNFEKNLLKCSWSADGSKVTAGSSDRMVYIWDTTSRRILYKLPGHTGSVNECVFHPSEPIVASCSS
SYLL+N MD + +WD+RP+AP+ RCVKIF+G+ HNFEKNLL+CSWS DGSK+ AGS+DR VY+WDTTSRRILYKLPGH GS+NE FHP EPI+ S SS
Subjt: SYLLTNGMDCKLCIWDMRPYAPQNRCVKIFEGHQHNFEKNLLKCSWSADGSKVTAGSSDRMVYIWDTTSRRILYKLPGHTGSVNECVFHPSEPIVASCSS
Query: DKQIYLGEI
DK++Y+GEI
Subjt: DKQIYLGEI
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| Arabidopsis top hits | e value | %identity | Alignment |
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| AT2G43770.1 Transducin/WD40 repeat-like superfamily protein | 5.4e-187 | 87.83 | Show/hide |
Query: ENALATVGPRPMEWSTVPYNPPQGPGPNGKQRTSSLESPIMLLSGHQSAIYTLKFNPDGNVIASGSHDKEIFLWNVHGDCKNFMVLRGHKNAVLDLHWTV
EN A GPRPMEWSTVP++ QGPGPNGK RTSSLE+PIMLLSGH SA+YT+KFNP G +IASGSHD+EIFLW VHGDCKNFMVL+GHKNA+LDLHWT
Subjt: ENALATVGPRPMEWSTVPYNPPQGPGPNGKQRTSSLESPIMLLSGHQSAIYTLKFNPDGNVIASGSHDKEIFLWNVHGDCKNFMVLRGHKNAVLDLHWTV
Query: DGSQIVSASPDKTLRAWDVETGKQIKKMAEHSSFVNSCCPTRRGPPLIVSGSDDGTAKLWDMRQRGAIQTFPDKYQITAVSFSDASDKIFTGGIDNDVKV
DGSQIVSASPDKT+RAWDVETGKQIKKMAEHSSFVNSCCPTRRGPPLI+SGSDDGTAKLWDMRQRGAIQTFPDKYQITAVSFSDA+DKIFTGG+DNDVKV
Subjt: DGSQIVSASPDKTLRAWDVETGKQIKKMAEHSSFVNSCCPTRRGPPLIVSGSDDGTAKLWDMRQRGAIQTFPDKYQITAVSFSDASDKIFTGGIDNDVKV
Query: WDLRKGEVMMTLQGHQDMITGMQLSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKIFEGHQHNFEKNLLKCSWSADGSKVTAGSSDRMVYIWDTTSRRI
WDLRKGE MTL+GHQD ITGM LSPDGSYLLTNGMD KLC+WDMRPYAPQNRCVKIFEGHQHNFEKNLLKCSWS DG+KVTAGSSDRMV+IWDTTSRR
Subjt: WDLRKGEVMMTLQGHQDMITGMQLSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKIFEGHQHNFEKNLLKCSWSADGSKVTAGSSDRMVYIWDTTSRRI
Query: LYKLPGHTGSVNECVFHPSEPIVASCSSDKQIYLGEI
+YKLPGHTGSVNECVFHP+EPI+ SCSSDK IYLGEI
Subjt: LYKLPGHTGSVNECVFHPSEPIVASCSSDKQIYLGEI
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| AT3G49660.1 Transducin/WD40 repeat-like superfamily protein | 9.0e-41 | 30.74 | Show/hide |
Query: LSGHQSAIYTLKFNPDGNVIASGSHDKEIFLWNVH----GDCKNFMVLRGHKNAVLDLHWTVDGSQIVSASPDKTLRAWDVETGKQIKKMAEHSSFVNSC
L+ H A+ ++KF+ DG ++AS S DK I + ++ + GH+N + D+ ++ D IVSAS DKTL+ WDVETG IK + H+++ C
Subjt: LSGHQSAIYTLKFNPDGNVIASGSHDKEIFLWNVH----GDCKNFMVLRGHKNAVLDLHWTVDGSQIVSASPDKTLRAWDVETGKQIKKMAEHSSFVNSC
Query: CPTRRGPPLIVSGSDDGTAKLWDMRQRGAIQTFP-DKYQITAVSFSDASDKIFTGGIDNDVKVWDLRKGEVMMTL-QGHQDMITGMQLSPDGSYLLTNGM
+IVSGS D T ++WD+ ++ P +TAV F+ I + D ++WD G + TL ++ ++ SP+G ++L +
Subjt: CPTRRGPPLIVSGSDDGTAKLWDMRQRGAIQTFP-DKYQITAVSFSDASDKIFTGGIDNDVKVWDLRKGEVMMTL-QGHQDMITGMQLSPDGSYLLTNGM
Query: DCKLCIWDMRPYAPQNRCVKIFEGHQHNFEKNLLKCSWSADGSKVTAGSSDRMVYIWDTTSRRILYKLPGHTGSVNECVFHPSEPIVASCSSDKQI
D L +W++ + +K + GH N + + +G ++ +GS D V++W+ S+++L KL GHT +V HP+E ++AS S DK +
Subjt: DCKLCIWDMRPYAPQNRCVKIFEGHQHNFEKNLLKCSWSADGSKVTAGSSDRMVYIWDTTSRRILYKLPGHTGSVNECVFHPSEPIVASCSSDKQI
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| AT5G08560.1 transducin family protein / WD-40 repeat family protein | 1.3e-26 | 24.92 | Show/hide |
Query: LLSGHQSAIYTLKFNPDGNVIASGSHDKEIFLWNVHGDCKNFM--VLRGHKNAVLDLHWTVDGSQIVSASPDKTLRAWDVETGKQIKKMAEHSSFVNSC-
+L H ++ L+F+ +G +AS S D+ +W + D + L GH V+ + W+ D Q+++ ++ +R WDV++G + + SC
Subjt: LLSGHQSAIYTLKFNPDGNVIASGSHDKEIFLWNVHGDCKNFM--VLRGHKNAVLDLHWTVDGSQIVSASPDKTLRAWDVETGKQIKKMAEHSSFVNSC-
Query: -CPTRRGPPLIVSGSDDGTAKLWDMRQRGAIQTFPDKYQ-ITAVSFSDASDKIFTGGIDNDVKVWDLRKGEVMMTLQGHQDMITGMQLSPDGSYLLTNGM
P +G I++G D + +WD+ R + Q ++ ++ +D + + D+ + ++D R+ V ++ +DMIT LS D Y+L N +
Subjt: -CPTRRGPPLIVSGSDDGTAKLWDMRQRGAIQTFPDKYQ-ITAVSFSDASDKIFTGGIDNDVKVWDLRKGEVMMTLQGHQDMITGMQLSPDGSYLLTNGM
Query: DCKLCIWDMRPYAPQNRCVKIFEGHQHNFEKNLLKCSWSADGSKVTAGSSDRMVYIWDTTSRRILYKLPGHTGSVNECVFHPSE-PIVASCSSDKQI
+ ++ +W++ + V ++GH+ + + C + + +GS D VYIW ++ +++ +LPGH G+VN + P+ ++AS S D I
Subjt: DCKLCIWDMRPYAPQNRCVKIFEGHQHNFEKNLLKCSWSADGSKVTAGSSDRMVYIWDTTSRRILYKLPGHTGSVNECVFHPSE-PIVASCSSDKQI
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| AT5G52820.1 WD-40 repeat family protein / notchless protein, putative | 1.0e-28 | 28.24 | Show/hide |
Query: LSGHQSAIYTLKFNPDGNVIASGSHDKEIFLWNVHGDCKNFMVLRGHKNAVLDLHWTVDGSQIVSASPDKTLRAWDVETGK-QIKKMAEHSSFVN--SCC
++GH A+ + F+PDG +ASGS D + LW+++ + F +GHKN VL + W+ DG +VS S + W+ + G+ + + H ++ S
Subjt: LSGHQSAIYTLKFNPDGNVIASGSHDKEIFLWNVHGDCKNFMVLRGHKNAVLDLHWTVDGSQIVSASPDKTLRAWDVETGK-QIKKMAEHSSFVN--SCC
Query: PTRRGPPL--IVSGSDDGTAKLWDMR-QRGAIQTFPDKYQITAVSFSDASDKIFTGGIDNDVKVWDLRKGEVMMTLQGHQDMITGMQLSPDGSYLLTNGM
P P V+ S DG A++WD+ ++ I +T V + I+TG D +K+W+ +G+++ L+GH I + LS + Y+L G
Subjt: PTRRGPPL--IVSGSDDGTAKLWDMR-QRGAIQTFPDKYQITAVSFSDASDKIFTGGIDNDVKVWDLRKGEVMMTLQGHQDMITGMQLSPDGSYLLTNGM
Query: DCKLCIWDM--RPYAPQNRCVKIFEGHQHNFEKNLLKCSWSADGSKVTAGSSDRMVYIWD-TTSRRILYKLPGHTGSVNECVFHPSEPIVASCSSDKQIY
+D R Y P K E ++N K ++ +GS D +++W+ + S++ +L GH VN F P +AS S DK +
Subjt: DCKLCIWDM--RPYAPQNRCVKIFEGHQHNFEKNLLKCSWSADGSKVTAGSSDRMVYIWD-TTSRRILYKLPGHTGSVNECVFHPSEPIVASCSSDKQIY
Query: L
L
Subjt: L
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| AT5G64730.1 Transducin/WD40 repeat-like superfamily protein | 4.2e-30 | 27.7 | Show/hide |
Query: LLSGHQSAIYTLKFNPDGNVIASGSHDKEIFLWNVHGDCKNFMVLRGHKNAVLDLHWTVDGSQIVSASPDKTLRAWDVETGKQIKKMAEHSSFVNSCCPT
+L GH+ A+ +FN DGN + D+ I LWN H + H V D+H T D ++ S D+ + WDV TG+ I+K H VN+
Subjt: LLSGHQSAIYTLKFNPDGNVIASGSHDKEIFLWNVHGDCKNFMVLRGHKNAVLDLHWTVDGSQIVSASPDKTLRAWDVETGKQIKKMAEHSSFVNSCCPT
Query: RRGPPLIVSGSDDGTAKLWDMRQRGA-----IQTFPDKYQITAVSFSDASDKIFTGGIDNDVKVWDLRKGEVMMTLQGHQDMITGMQLSPDGSYLLTNGM
++VS D + ++WD R I TF D T +S +I G +D V+ +D+R G M G + + +S DG+ +L +
Subjt: RRGPPLIVSGSDDGTAKLWDMRQRGA-----IQTFPDKYQITAVSFSDASDKIFTGGIDNDVKVWDLRKGEVMMTLQGHQDMITGMQLSPDGSYLLTNGM
Query: DCKLCIWDMRPYAPQNRCVKIFEGHQHNFEKNLLKCSWSADGSKVTAGSSDRMVYIWDTTSRRILYKLPGHTGSVNECVFHPSEPIVASCSSDKQI
D L + D +++++GH K C + + V GS D +V+ WD ++L K H V +HP E + + S D I
Subjt: DCKLCIWDMRPYAPQNRCVKIFEGHQHNFEKNLLKCSWSADGSKVTAGSSDRMVYIWDTTSRRILYKLPGHTGSVNECVFHPSEPIVASCSSDKQI
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