; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

IVF0002747 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0002747
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionPoly(A)-specific ribonuclease
Genome locationchr12:12669441..12670778
RNA-Seq ExpressionIVF0002747
SyntenyIVF0002747
Gene Ontology termsGO:0043928 - exonucleolytic catabolism of deadenylated mRNA (biological process)
GO:0090503 - RNA phosphodiester bond hydrolysis, exonucleolytic (biological process)
GO:0000932 - P-body (cellular component)
GO:0005634 - nucleus (cellular component)
GO:0030015 - CCR4-NOT core complex (cellular component)
GO:0003676 - nucleic acid binding (molecular function)
GO:0004535 - poly(A)-specific ribonuclease activity (molecular function)
InterPro domainsIPR006941 - Ribonuclease CAF1
IPR012337 - Ribonuclease H-like superfamily
IPR036397 - Ribonuclease H superfamily
IPR039637 - CCR4-NOT transcription complex subunit 7/8/Pop2


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004139505.1 LOW QUALITY PROTEIN: probable CCR4-associated factor 1 homolog 11 [Cucumis sativus]3.38e-18991.1Show/hide
Query:  MLIHDLNINHQSIHKPIQIREVWASNLDSEFRLISDLIDRFPCVSMDTEFPGVIFPQQTKPKFPNHPSYHYQFLKSNVDVLHLIQIGITLSDSDGNLPDL
        MLIHDLN NH+SI    QIREVWASNL+SEFRLI DLID+FPCVSMDTEFPGVIFPQQ  PK PNHPS+HYQFLKSNVD+LHLIQIGITLSDSDGNLPDL
Subjt:  MLIHDLNINHQSIHKPIQIREVWASNLDSEFRLISDLIDRFPCVSMDTEFPGVIFPQQTKPKFPNHPSYHYQFLKSNVDVLHLIQIGITLSDSDGNLPDL

Query:  GTGDTRFIWEFNFKDFDVARDPHAPDSIELLRRQGIDFERNREEGIDSSRFAELMMSSGLVCNESVSWVTFHSAYDFGYLVKILTQQKLPKGLEEFLGVV
        GTGDTRFIWEFNFKDFDVARD HAP+SIELLRRQGIDF+RNREEGIDSSRFAELMMSSGLVCN+SVSWVTFHSAYDFGYLVKILT QKLPK LE+FLGVV
Subjt:  GTGDTRFIWEFNFKDFDVARDPHAPDSIELLRRQGIDFERNREEGIDSSRFAELMMSSGLVCNESVSWVTFHSAYDFGYLVKILTQQKLPKGLEEFLGVV

Query:  RVFFGDNVYDMKYMMRFCQSLYGGLDRIAKTMNVNRAVGKCHQAGSDSLLTWHAFQKMRDTFFVENEMHKHAGVLYGLEVF
        R+FFGDNVYDMKY+MRFCQSLYGGLDRIAKTMNVNRAVGKCHQAGSDSLLTWHAFQKMRDTFFV+ EMHKHAGVLYGLEVF
Subjt:  RVFFGDNVYDMKYMMRFCQSLYGGLDRIAKTMNVNRAVGKCHQAGSDSLLTWHAFQKMRDTFFVENEMHKHAGVLYGLEVF

XP_008463638.1 PREDICTED: probable CCR4-associated factor 1 homolog 11 [Cucumis melo]6.19e-211100Show/hide
Query:  MLIHDLNINHQSIHKPIQIREVWASNLDSEFRLISDLIDRFPCVSMDTEFPGVIFPQQTKPKFPNHPSYHYQFLKSNVDVLHLIQIGITLSDSDGNLPDL
        MLIHDLNINHQSIHKPIQIREVWASNLDSEFRLISDLIDRFPCVSMDTEFPGVIFPQQTKPKFPNHPSYHYQFLKSNVDVLHLIQIGITLSDSDGNLPDL
Subjt:  MLIHDLNINHQSIHKPIQIREVWASNLDSEFRLISDLIDRFPCVSMDTEFPGVIFPQQTKPKFPNHPSYHYQFLKSNVDVLHLIQIGITLSDSDGNLPDL

Query:  GTGDTRFIWEFNFKDFDVARDPHAPDSIELLRRQGIDFERNREEGIDSSRFAELMMSSGLVCNESVSWVTFHSAYDFGYLVKILTQQKLPKGLEEFLGVV
        GTGDTRFIWEFNFKDFDVARDPHAPDSIELLRRQGIDFERNREEGIDSSRFAELMMSSGLVCNESVSWVTFHSAYDFGYLVKILTQQKLPKGLEEFLGVV
Subjt:  GTGDTRFIWEFNFKDFDVARDPHAPDSIELLRRQGIDFERNREEGIDSSRFAELMMSSGLVCNESVSWVTFHSAYDFGYLVKILTQQKLPKGLEEFLGVV

Query:  RVFFGDNVYDMKYMMRFCQSLYGGLDRIAKTMNVNRAVGKCHQAGSDSLLTWHAFQKMRDTFFVENEMHKHAGVLYGLEVF
        RVFFGDNVYDMKYMMRFCQSLYGGLDRIAKTMNVNRAVGKCHQAGSDSLLTWHAFQKMRDTFFVENEMHKHAGVLYGLEVF
Subjt:  RVFFGDNVYDMKYMMRFCQSLYGGLDRIAKTMNVNRAVGKCHQAGSDSLLTWHAFQKMRDTFFVENEMHKHAGVLYGLEVF

XP_022142408.1 probable CCR4-associated factor 1 homolog 11 [Momordica charantia]1.15e-16280.43Show/hide
Query:  MLIHDLNINHQSIHKPIQIREVWASNLDSEFRLISDLIDRFPCVSMDTEFPGVIFPQQTKPKF-PNHPSYHYQFLKSNVDVLHLIQIGITLSDSDGNLPD
        M++ DL  N     KPIQIREVWASNL+SEF LI DLID+FPCVSMDTEFPGV+F    KP    N PS HY+ LKSNVD L+LIQIGITLSDSDGNLPD
Subjt:  MLIHDLNINHQSIHKPIQIREVWASNLDSEFRLISDLIDRFPCVSMDTEFPGVIFPQQTKPKF-PNHPSYHYQFLKSNVDVLHLIQIGITLSDSDGNLPD

Query:  LGTGDTRFIWEFNFKDFDVARDPHAPDSIELLRRQGIDFERNREEGIDSSRFAELMMSSGLVCNESVSWVTFHSAYDFGYLVKILTQQKLPKGLEEFLGV
        LGTG +RFIWEFNF DFDVARD HAPDSIELLRRQGIDF+RNR EGIDS RFAELMMSSGLVCN+SVSWVTFHSAYDFGYLVK+LT++ LP  LEEFLGV
Subjt:  LGTGDTRFIWEFNFKDFDVARDPHAPDSIELLRRQGIDFERNREEGIDSSRFAELMMSSGLVCNESVSWVTFHSAYDFGYLVKILTQQKLPKGLEEFLGV

Query:  VRVFFGDNVYDMKYMMRFCQSLYGGLDRIAKTMNVNRAVGKCHQAGSDSLLTWHAFQKMRDTFFVENEMHKHAGVLYGLEV
        +RVFFGD VYD+KYMMRFC+SLYGGLDRIAK +NV+RAVGKCHQAGSDSLLTWHAFQKMRDT+FV+N + KHAGVLYGLEV
Subjt:  VRVFFGDNVYDMKYMMRFCQSLYGGLDRIAKTMNVNRAVGKCHQAGSDSLLTWHAFQKMRDTFFVENEMHKHAGVLYGLEV

XP_022945861.1 probable CCR4-associated factor 1 homolog 11 [Cucurbita moschata]4.11e-16178.8Show/hide
Query:  MLIHDLNINHQSIHKPIQIREVWASNLDSEFRLISDLIDRFPCVSMDTEFPGVIFPQQTKP--KFPNHPSYHYQFLKSNVDVLHLIQIGITLSDSDGNLP
        M+ HDLN NH   +K I+IREVWASNL+SEF+LI DLID FPCVSMDTEFPG++F   T P        S HY+ LKSNVD L+LIQIGITLSDSDGNLP
Subjt:  MLIHDLNINHQSIHKPIQIREVWASNLDSEFRLISDLIDRFPCVSMDTEFPGVIFPQQTKP--KFPNHPSYHYQFLKSNVDVLHLIQIGITLSDSDGNLP

Query:  DLGTGDTRFIWEFNFKDFDVARDPHAPDSIELLRRQGIDFERNREEGIDSSRFAELMMSSGLVCNESVSWVTFHSAYDFGYLVKILTQQKLPKGLEEFLG
        DLGT D+RFIWEFNF DFD+ARD +APDSI+LLRRQGIDF+RNR EGIDS RFAELMMSSGLVCN+SVSWVTFHSAYDF YL+KILTQ+ LP  L+EFLG
Subjt:  DLGTGDTRFIWEFNFKDFDVARDPHAPDSIELLRRQGIDFERNREEGIDSSRFAELMMSSGLVCNESVSWVTFHSAYDFGYLVKILTQQKLPKGLEEFLG

Query:  VVRVFFGDNVYDMKYMMRFCQSLYGGLDRIAKTMNVNRAVGKCHQAGSDSLLTWHAFQKMRDTFFVENEMHKHAGVLYGLEVF
        V+RV FGDNVYD+KYMMRFC+SLYGGLDRIAK++NVNRAVGKCHQAGSDSLLTWHAFQKMRDTFFV+NE+ KHAGVLYGLE F
Subjt:  VVRVFFGDNVYDMKYMMRFCQSLYGGLDRIAKTMNVNRAVGKCHQAGSDSLLTWHAFQKMRDTFFVENEMHKHAGVLYGLEVF

XP_038877224.1 probable CCR4-associated factor 1 homolog 11 [Benincasa hispida]1.37e-17082.98Show/hide
Query:  MLIHDLNINHQSIHKPIQIREVWASNLDSEFRLISDLIDRFPCVSMDTEFPGVIFPQQTKP-KFPNHPSYHYQFLKSNVDVLHLIQIGITLSDSDGNLPD
        M+IHDLNIN++SI    +IREVWASNL+SEF+LI DLID+FPCVSMDTEFPG++F    +P  F + PS HY+ LKSNVD LHLIQIGITLSDSDGNLPD
Subjt:  MLIHDLNINHQSIHKPIQIREVWASNLDSEFRLISDLIDRFPCVSMDTEFPGVIFPQQTKP-KFPNHPSYHYQFLKSNVDVLHLIQIGITLSDSDGNLPD

Query:  LGTGDTRFIWEFNFKDFDVARDPHAPDSIELLRRQGIDFERNREEGIDSSRFAELMMSSGLVCNESVSWVTFHSAYDFGYLVKILTQQKLPKGLEEFLGV
        LGT DTRFIWEFNF DFDVARD HAPDSIELLRRQGIDF RNR EGIDSSRFAELMMSSGLVCN SVSWVTFHSAYDFGYLVKILTQ++LP  ++EFLGV
Subjt:  LGTGDTRFIWEFNFKDFDVARDPHAPDSIELLRRQGIDFERNREEGIDSSRFAELMMSSGLVCNESVSWVTFHSAYDFGYLVKILTQQKLPKGLEEFLGV

Query:  VRVFFGDNVYDMKYMMRFCQSLYGGLDRIAKTMNVNRAVGKCHQAGSDSLLTWHAFQKMRDTFFVENEMHKHAGVLYGLEVF
        +RVFFGDNVYDMKY+MRFC+SLYGGLDRIAK +NVNRAVGKCHQAGSDSLLTWHAFQKMRDT+FV+NEM KHAGVLYGLEVF
Subjt:  VRVFFGDNVYDMKYMMRFCQSLYGGLDRIAKTMNVNRAVGKCHQAGSDSLLTWHAFQKMRDTFFVENEMHKHAGVLYGLEVF

TrEMBL top hitse value%identityAlignment
A0A0A0LYC8 Poly(A)-specific ribonuclease9.2e-14891.1Show/hide
Query:  MLIHDLNINHQSIHKPIQIREVWASNLDSEFRLISDLIDRFPCVSMDTEFPGVIFPQQTKPKFPNHPSYHYQFLKSNVDVLHLIQIGITLSDSDGNLPDL
        MLIHDLN NH+S    IQIREVWASNL+SEFRLI DLID+FPCVSMDTEFPGVIFPQQ  PK PNHPS+HYQFLKSNVD+LHLIQIGITLSDSDGNLPDL
Subjt:  MLIHDLNINHQSIHKPIQIREVWASNLDSEFRLISDLIDRFPCVSMDTEFPGVIFPQQTKPKFPNHPSYHYQFLKSNVDVLHLIQIGITLSDSDGNLPDL

Query:  GTGDTRFIWEFNFKDFDVARDPHAPDSIELLRRQGIDFERNREEGIDSSRFAELMMSSGLVCNESVSWVTFHSAYDFGYLVKILTQQKLPKGLEEFLGVV
        GTGDTRFIWEFNFKDFDVARD HAP+SIELLRRQGIDF+RNREEGIDSSRFAELMMSSGLVCN+SVSWVTFHSAYDFGYLVKILT QKLPK LE+FLGVV
Subjt:  GTGDTRFIWEFNFKDFDVARDPHAPDSIELLRRQGIDFERNREEGIDSSRFAELMMSSGLVCNESVSWVTFHSAYDFGYLVKILTQQKLPKGLEEFLGVV

Query:  RVFFGDNVYDMKYMMRFCQSLYGGLDRIAKTMNVNRAVGKCHQAGSDSLLTWHAFQKMRDTFFVENEMHKHAGVLYGLEVF
        R+FFGDNVYDMKY+MRFCQSLYGGLDRIAKTMNVNRAVGKCHQAGSDSLLTWHAFQKMRDTFFV+ EMHKHAGVLYGLEVF
Subjt:  RVFFGDNVYDMKYMMRFCQSLYGGLDRIAKTMNVNRAVGKCHQAGSDSLLTWHAFQKMRDTFFVENEMHKHAGVLYGLEVF

A0A1S3CJQ2 Poly(A)-specific ribonuclease2.4e-164100Show/hide
Query:  MLIHDLNINHQSIHKPIQIREVWASNLDSEFRLISDLIDRFPCVSMDTEFPGVIFPQQTKPKFPNHPSYHYQFLKSNVDVLHLIQIGITLSDSDGNLPDL
        MLIHDLNINHQSIHKPIQIREVWASNLDSEFRLISDLIDRFPCVSMDTEFPGVIFPQQTKPKFPNHPSYHYQFLKSNVDVLHLIQIGITLSDSDGNLPDL
Subjt:  MLIHDLNINHQSIHKPIQIREVWASNLDSEFRLISDLIDRFPCVSMDTEFPGVIFPQQTKPKFPNHPSYHYQFLKSNVDVLHLIQIGITLSDSDGNLPDL

Query:  GTGDTRFIWEFNFKDFDVARDPHAPDSIELLRRQGIDFERNREEGIDSSRFAELMMSSGLVCNESVSWVTFHSAYDFGYLVKILTQQKLPKGLEEFLGVV
        GTGDTRFIWEFNFKDFDVARDPHAPDSIELLRRQGIDFERNREEGIDSSRFAELMMSSGLVCNESVSWVTFHSAYDFGYLVKILTQQKLPKGLEEFLGVV
Subjt:  GTGDTRFIWEFNFKDFDVARDPHAPDSIELLRRQGIDFERNREEGIDSSRFAELMMSSGLVCNESVSWVTFHSAYDFGYLVKILTQQKLPKGLEEFLGVV

Query:  RVFFGDNVYDMKYMMRFCQSLYGGLDRIAKTMNVNRAVGKCHQAGSDSLLTWHAFQKMRDTFFVENEMHKHAGVLYGLEVF
        RVFFGDNVYDMKYMMRFCQSLYGGLDRIAKTMNVNRAVGKCHQAGSDSLLTWHAFQKMRDTFFVENEMHKHAGVLYGLEVF
Subjt:  RVFFGDNVYDMKYMMRFCQSLYGGLDRIAKTMNVNRAVGKCHQAGSDSLLTWHAFQKMRDTFFVENEMHKHAGVLYGLEVF

A0A5A7T1W0 Poly(A)-specific ribonuclease2.4e-164100Show/hide
Query:  MLIHDLNINHQSIHKPIQIREVWASNLDSEFRLISDLIDRFPCVSMDTEFPGVIFPQQTKPKFPNHPSYHYQFLKSNVDVLHLIQIGITLSDSDGNLPDL
        MLIHDLNINHQSIHKPIQIREVWASNLDSEFRLISDLIDRFPCVSMDTEFPGVIFPQQTKPKFPNHPSYHYQFLKSNVDVLHLIQIGITLSDSDGNLPDL
Subjt:  MLIHDLNINHQSIHKPIQIREVWASNLDSEFRLISDLIDRFPCVSMDTEFPGVIFPQQTKPKFPNHPSYHYQFLKSNVDVLHLIQIGITLSDSDGNLPDL

Query:  GTGDTRFIWEFNFKDFDVARDPHAPDSIELLRRQGIDFERNREEGIDSSRFAELMMSSGLVCNESVSWVTFHSAYDFGYLVKILTQQKLPKGLEEFLGVV
        GTGDTRFIWEFNFKDFDVARDPHAPDSIELLRRQGIDFERNREEGIDSSRFAELMMSSGLVCNESVSWVTFHSAYDFGYLVKILTQQKLPKGLEEFLGVV
Subjt:  GTGDTRFIWEFNFKDFDVARDPHAPDSIELLRRQGIDFERNREEGIDSSRFAELMMSSGLVCNESVSWVTFHSAYDFGYLVKILTQQKLPKGLEEFLGVV

Query:  RVFFGDNVYDMKYMMRFCQSLYGGLDRIAKTMNVNRAVGKCHQAGSDSLLTWHAFQKMRDTFFVENEMHKHAGVLYGLEVF
        RVFFGDNVYDMKYMMRFCQSLYGGLDRIAKTMNVNRAVGKCHQAGSDSLLTWHAFQKMRDTFFVENEMHKHAGVLYGLEVF
Subjt:  RVFFGDNVYDMKYMMRFCQSLYGGLDRIAKTMNVNRAVGKCHQAGSDSLLTWHAFQKMRDTFFVENEMHKHAGVLYGLEVF

A0A6J1CN71 Poly(A)-specific ribonuclease1.4e-12780.43Show/hide
Query:  MLIHDLNINHQSIHKPIQIREVWASNLDSEFRLISDLIDRFPCVSMDTEFPGVIFPQQTKPKF-PNHPSYHYQFLKSNVDVLHLIQIGITLSDSDGNLPD
        M++ DL  N     KPIQIREVWASNL+SEF LI DLID+FPCVSMDTEFPGV+F    KP    N PS HY+ LKSNVD L+LIQIGITLSDSDGNLPD
Subjt:  MLIHDLNINHQSIHKPIQIREVWASNLDSEFRLISDLIDRFPCVSMDTEFPGVIFPQQTKPKF-PNHPSYHYQFLKSNVDVLHLIQIGITLSDSDGNLPD

Query:  LGTGDTRFIWEFNFKDFDVARDPHAPDSIELLRRQGIDFERNREEGIDSSRFAELMMSSGLVCNESVSWVTFHSAYDFGYLVKILTQQKLPKGLEEFLGV
        LGTG +RFIWEFNF DFDVARD HAPDSIELLRRQGIDF+RNR EGIDS RFAELMMSSGLVCN+SVSWVTFHSAYDFGYLVK+LT++ LP  LEEFLGV
Subjt:  LGTGDTRFIWEFNFKDFDVARDPHAPDSIELLRRQGIDFERNREEGIDSSRFAELMMSSGLVCNESVSWVTFHSAYDFGYLVKILTQQKLPKGLEEFLGV

Query:  VRVFFGDNVYDMKYMMRFCQSLYGGLDRIAKTMNVNRAVGKCHQAGSDSLLTWHAFQKMRDTFFVENEMHKHAGVLYGLEV
        +RVFFGD VYD+KYMMRFC+SLYGGLDRIAK +NV+RAVGKCHQAGSDSLLTWHAFQKMRDT+FV+N + KHAGVLYGLEV
Subjt:  VRVFFGDNVYDMKYMMRFCQSLYGGLDRIAKTMNVNRAVGKCHQAGSDSLLTWHAFQKMRDTFFVENEMHKHAGVLYGLEV

A0A6J1HU54 Poly(A)-specific ribonuclease2.6e-12678.45Show/hide
Query:  MLIHDLNINHQSIHKPIQIREVWASNLDSEFRLISDLIDRFPCVSMDTEFPGVIFPQQTKP--KFPNHPSYHYQFLKSNVDVLHLIQIGITLSDSDGNLP
        M+ HDLN NH   +K I+IREVWASNL+SEF+LI DLID FPCVSMDTEFPG++F   T P        S HY+ LKSNVD L+LIQIGITLSDSDGNLP
Subjt:  MLIHDLNINHQSIHKPIQIREVWASNLDSEFRLISDLIDRFPCVSMDTEFPGVIFPQQTKP--KFPNHPSYHYQFLKSNVDVLHLIQIGITLSDSDGNLP

Query:  DLGTGDTRFIWEFNFKDFDVARDPHAPDSIELLRRQGIDFERNREEGIDSSRFAELMMSSGLVCNESVSWVTFHSAYDFGYLVKILTQQKLPKGLEEFLG
        DLGT D+RFIWEFNF DFD+ARD +APDSI+LLRRQGIDF+RNR EGIDS RFAELMMSSGLVCN+SVSWVTFHSAYDF YL+KILTQ++LP  ++EFLG
Subjt:  DLGTGDTRFIWEFNFKDFDVARDPHAPDSIELLRRQGIDFERNREEGIDSSRFAELMMSSGLVCNESVSWVTFHSAYDFGYLVKILTQQKLPKGLEEFLG

Query:  VVRVFFGDNVYDMKYMMRFCQSLYGGLDRIAKTMNVNRAVGKCHQAGSDSLLTWHAFQKMRDTFFVENEMHKHAGVLYGLEVF
        V+RV FGDNVYD+KYMMRFC+SLYGGLDRIAK++NVNRAVGKCHQAGSDSLLTWHAFQKMRDTFFV+NE+ KHAGVLYGLE F
Subjt:  VVRVFFGDNVYDMKYMMRFCQSLYGGLDRIAKTMNVNRAVGKCHQAGSDSLLTWHAFQKMRDTFFVENEMHKHAGVLYGLEVF

SwissProt top hitse value%identityAlignment
Q9FMS6 Probable CCR4-associated factor 1 homolog 111.9e-11071.16Show/hide
Query:  IQIREVWASNLDSEFRLISDLIDRFPCVSMDTEFPGVIFPQQTKPKFPNHPSYHYQFLKSNVDVLHLIQIGITLSDSDGNLPDL-GTGDTRFIWEFNFKD
        I IR+VWA NL+SEF LI  +++ +P +SMDTEFPGVI+          +P+Y Y  LKSNVD L LIQ+G+TLSD+DGNLPDL G  + R+IWEFNF+D
Subjt:  IQIREVWASNLDSEFRLISDLIDRFPCVSMDTEFPGVIFPQQTKPKFPNHPSYHYQFLKSNVDVLHLIQIGITLSDSDGNLPDL-GTGDTRFIWEFNFKD

Query:  FDVARDPHAPDSIELLRRQGIDFERNREEGIDSSRFAELMMSSGLVCNESVSWVTFHSAYDFGYLVKILTQQKLPKGLEEFLGVVRVFFGDNVYDMKYMM
        FDV RDPHAPDSIELLRR GIDFERNR EG++S RFAELMMSSGL+CNESVSWVTFHSAYDFGYLVKILT+++LP  L EFLG++R FFGD VYD+K++M
Subjt:  FDVARDPHAPDSIELLRRQGIDFERNREEGIDSSRFAELMMSSGLVCNESVSWVTFHSAYDFGYLVKILTQQKLPKGLEEFLGVVRVFFGDNVYDMKYMM

Query:  RFC-QSLYGGLDRIAKTMNVNRAVGKCHQAGSDSLLTWHAFQKMRDTFFVENEMHKHAGVLYGLEVF
        RFC Q LYGGLDR+A+++ VNRAVGKCHQAGSDSLLTW AFQ+MRD +FVE+   KHAGVLYGLEVF
Subjt:  RFC-QSLYGGLDRIAKTMNVNRAVGKCHQAGSDSLLTWHAFQKMRDTFFVENEMHKHAGVLYGLEVF

Q9LEU4 Probable CCR4-associated factor 1 homolog 106.5e-7453.03Show/hide
Query:  IQIREVWASNLDSEFRLISDLIDRFPCVSMDTEFPGVIFPQQTKPKFPNHPSYHYQFLKSNVDVLHLIQIGITLSDSDGNLPDLGTGDTRFIWEFNFKDF
        I IREVW  NL  EF LI +++D+F  ++MDTEFPGV+       K+ N    +Y+ LK NVD+L LIQ+G+T SD +GNLP  GT D   IW+FNF++F
Subjt:  IQIREVWASNLDSEFRLISDLIDRFPCVSMDTEFPGVIFPQQTKPKFPNHPSYHYQFLKSNVDVLHLIQIGITLSDSDGNLPDLGTGDTRFIWEFNFKDF

Query:  DVARDPHAPDSIELLRRQGIDFERNREEGIDSSRFAELMMSSGLVCNESVSWVTFHSAYDFGYLVKILTQQKLPKGLEEFLGVVRVFFGDNVYDMKYMMR
        ++  D +A +SIELLR+ GIDF++N E+GID  RF ELMMSSG+V N+++SWVTFH  YDFGYLVK+LT ++LP    +F  ++ V+F   VYD+K++M 
Subjt:  DVARDPHAPDSIELLRRQGIDFERNREEGIDSSRFAELMMSSGLVCNESVSWVTFHSAYDFGYLVKILTQQKLPKGLEEFLGVVRVFFGDNVYDMKYMMR

Query:  FCQSLYGGLDRIAKTMNVNRAVGKCHQAGSDSLLTWHAFQKMRDTFFVENEMHKHAGVLYGLEV
        FC  L+GGL+R+A+ M V R VG CHQAGSDSLLT  +F+K+++ +F      K+ GVLYGL V
Subjt:  FCQSLYGGLDRIAKTMNVNRAVGKCHQAGSDSLLTWHAFQKMRDTFFVENEMHKHAGVLYGLEV

Q9LXM2 Probable CCR4-associated factor 1 homolog 91.1e-10571.21Show/hide
Query:  REVWASNLDSEFRLISDLIDRFPCVSMDTEFPGVIFPQQTKPKFPNHPSYHYQFLKSNVDVLHLIQIGITLSDSDGNLPDLGTGDTR-FIWEFNFKDFDV
        REVWA NL+SEF LIS++ID +P +SMDTEFPGVIF  ++  +F N P   Y  LK+NVD L LIQ+G+TLSD +GNLPDLG    R FIWEFNF+DFDV
Subjt:  REVWASNLDSEFRLISDLIDRFPCVSMDTEFPGVIFPQQTKPKFPNHPSYHYQFLKSNVDVLHLIQIGITLSDSDGNLPDLGTGDTR-FIWEFNFKDFDV

Query:  ARDPHAPDSIELLRRQGIDFERNREEGIDSSRFAELMMSSGLVCNESVSWVTFHSAYDFGYLVKILTQQKLPKGLEEFLGVVRVFFGDNVYDMKYMMRFC
        ARD HAPDSIELLRRQGIDFERN  +G++S RFAELMMSSGLVCNE VSWVTFHSAYDFGYL+KILT+++LP  L EF  V+RV FG+ VYD+K+MM+FC
Subjt:  ARDPHAPDSIELLRRQGIDFERNREEGIDSSRFAELMMSSGLVCNESVSWVTFHSAYDFGYLVKILTQQKLPKGLEEFLGVVRVFFGDNVYDMKYMMRFC

Query:  Q-SLYGGLDRIAKTMNVNRAVGKCHQAGSDSLLTWHAFQKMRDTFFVENEMHKHAGVLYGLEVF
        +  L+GGLDR+A+T+ VNRAVGKCHQAGSDSLLTWHAFQ+MRD +FV++   KHAGVLYGLEVF
Subjt:  Q-SLYGGLDRIAKTMNVNRAVGKCHQAGSDSLLTWHAFQKMRDTFFVENEMHKHAGVLYGLEVF

Q9SAI2 Probable CCR4-associated factor 1 homolog 67.4e-7854.55Show/hide
Query:  IQIREVWASNLDSEFRLISDLIDRFPCVSMDTEFPGVIFPQQTKPKFPNHPSYHYQFLKSNVDVLHLIQIGITLSDSDGNLPDLGTGDTRFIWEFNFKDF
        IQIREVW  NL  E  LI D++D FP V+MDTEFPG++   +    F ++  YHY+ LK+NV++L +IQ+G+T S+  GNLP  GT D   IW+FNF++F
Subjt:  IQIREVWASNLDSEFRLISDLIDRFPCVSMDTEFPGVIFPQQTKPKFPNHPSYHYQFLKSNVDVLHLIQIGITLSDSDGNLPDLGTGDTRFIWEFNFKDF

Query:  DVARDPHAPDSIELLRRQGIDFERNREEGIDSSRFAELMMSSGLVCNESVSWVTFHSAYDFGYLVKILTQQKLPKGLEEFLGVVRVFFGDNVYDMKYMMR
        D+  D  A DSIELL++ GID  +N  +GIDS RFAEL+MSSG+V NE+V WVTFHS YDFGYL+K+LT Q LP    +F  ++ V+F   VYD+K++M+
Subjt:  DVARDPHAPDSIELLRRQGIDFERNREEGIDSSRFAELMMSSGLVCNESVSWVTFHSAYDFGYLVKILTQQKLPKGLEEFLGVVRVFFGDNVYDMKYMMR

Query:  FCQSLYGGLDRIAKTMNVNRAVGKCHQAGSDSLLTWHAFQKMRDTFFVENEMHKHAGVLYGLEV
        FC SL+GGL+++A+ + V R VG CHQAGSDSLLT   F+K+++ FFV   +HK++GVLYGL V
Subjt:  FCQSLYGGLDRIAKTMNVNRAVGKCHQAGSDSLLTWHAFQKMRDTFFVENEMHKHAGVLYGLEV

Q9SKZ2 Probable CCR4-associated factor 1 homolog 74.6e-8055.3Show/hide
Query:  IQIREVWASNLDSEFRLISDLIDRFPCVSMDTEFPGVIFPQQTKPKFPNHPSYHYQFLKSNVDVLHLIQIGITLSDSDGNLPDLGTGDTRFIWEFNFKDF
        IQIREVW  NL+SE  LI +++D FP V+MDTEFPG++   +    F  +  YHY+ LK+NV++L +IQ+G+T SD  GNLP  GT +   IW+FNF++F
Subjt:  IQIREVWASNLDSEFRLISDLIDRFPCVSMDTEFPGVIFPQQTKPKFPNHPSYHYQFLKSNVDVLHLIQIGITLSDSDGNLPDLGTGDTRFIWEFNFKDF

Query:  DVARDPHAPDSIELLRRQGIDFERNREEGIDSSRFAELMMSSGLVCNESVSWVTFHSAYDFGYLVKILTQQKLPKGLEEFLGVVRVFFGDNVYDMKYMMR
        D+  D +A DSIELLR+ GIDF +N E GIDS RFAEL+MSSG+V NE+V WVTFHS YDFGYL+K+LT Q LP+    F  ++ V+F   VYD+K++M+
Subjt:  DVARDPHAPDSIELLRRQGIDFERNREEGIDSSRFAELMMSSGLVCNESVSWVTFHSAYDFGYLVKILTQQKLPKGLEEFLGVVRVFFGDNVYDMKYMMR

Query:  FCQSLYGGLDRIAKTMNVNRAVGKCHQAGSDSLLTWHAFQKMRDTFFVENEMHKHAGVLYGLEV
        FC SL+GGL+++A+ ++V R VG CHQAGSDSLLT   F+K+++ FF+   M K++GVLYGL V
Subjt:  FCQSLYGGLDRIAKTMNVNRAVGKCHQAGSDSLLTWHAFQKMRDTFFVENEMHKHAGVLYGLEV

Arabidopsis top hitse value%identityAlignment
AT1G80780.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein5.2e-7954.55Show/hide
Query:  IQIREVWASNLDSEFRLISDLIDRFPCVSMDTEFPGVIFPQQTKPKFPNHPSYHYQFLKSNVDVLHLIQIGITLSDSDGNLPDLGTGDTRFIWEFNFKDF
        IQIREVW  NL  E  LI D++D FP V+MDTEFPG++   +    F ++  YHY+ LK+NV++L +IQ+G+T S+  GNLP  GT D   IW+FNF++F
Subjt:  IQIREVWASNLDSEFRLISDLIDRFPCVSMDTEFPGVIFPQQTKPKFPNHPSYHYQFLKSNVDVLHLIQIGITLSDSDGNLPDLGTGDTRFIWEFNFKDF

Query:  DVARDPHAPDSIELLRRQGIDFERNREEGIDSSRFAELMMSSGLVCNESVSWVTFHSAYDFGYLVKILTQQKLPKGLEEFLGVVRVFFGDNVYDMKYMMR
        D+  D  A DSIELL++ GID  +N  +GIDS RFAEL+MSSG+V NE+V WVTFHS YDFGYL+K+LT Q LP    +F  ++ V+F   VYD+K++M+
Subjt:  DVARDPHAPDSIELLRRQGIDFERNREEGIDSSRFAELMMSSGLVCNESVSWVTFHSAYDFGYLVKILTQQKLPKGLEEFLGVVRVFFGDNVYDMKYMMR

Query:  FCQSLYGGLDRIAKTMNVNRAVGKCHQAGSDSLLTWHAFQKMRDTFFVENEMHKHAGVLYGLEV
        FC SL+GGL+++A+ + V R VG CHQAGSDSLLT   F+K+++ FFV   +HK++GVLYGL V
Subjt:  FCQSLYGGLDRIAKTMNVNRAVGKCHQAGSDSLLTWHAFQKMRDTFFVENEMHKHAGVLYGLEV

AT1G80780.2 Polynucleotidyl transferase, ribonuclease H-like superfamily protein5.2e-7954.55Show/hide
Query:  IQIREVWASNLDSEFRLISDLIDRFPCVSMDTEFPGVIFPQQTKPKFPNHPSYHYQFLKSNVDVLHLIQIGITLSDSDGNLPDLGTGDTRFIWEFNFKDF
        IQIREVW  NL  E  LI D++D FP V+MDTEFPG++   +    F ++  YHY+ LK+NV++L +IQ+G+T S+  GNLP  GT D   IW+FNF++F
Subjt:  IQIREVWASNLDSEFRLISDLIDRFPCVSMDTEFPGVIFPQQTKPKFPNHPSYHYQFLKSNVDVLHLIQIGITLSDSDGNLPDLGTGDTRFIWEFNFKDF

Query:  DVARDPHAPDSIELLRRQGIDFERNREEGIDSSRFAELMMSSGLVCNESVSWVTFHSAYDFGYLVKILTQQKLPKGLEEFLGVVRVFFGDNVYDMKYMMR
        D+  D  A DSIELL++ GID  +N  +GIDS RFAEL+MSSG+V NE+V WVTFHS YDFGYL+K+LT Q LP    +F  ++ V+F   VYD+K++M+
Subjt:  DVARDPHAPDSIELLRRQGIDFERNREEGIDSSRFAELMMSSGLVCNESVSWVTFHSAYDFGYLVKILTQQKLPKGLEEFLGVVRVFFGDNVYDMKYMMR

Query:  FCQSLYGGLDRIAKTMNVNRAVGKCHQAGSDSLLTWHAFQKMRDTFFVENEMHKHAGVLYGLEV
        FC SL+GGL+++A+ + V R VG CHQAGSDSLLT   F+K+++ FFV   +HK++GVLYGL V
Subjt:  FCQSLYGGLDRIAKTMNVNRAVGKCHQAGSDSLLTWHAFQKMRDTFFVENEMHKHAGVLYGLEV

AT2G32070.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein3.3e-8155.3Show/hide
Query:  IQIREVWASNLDSEFRLISDLIDRFPCVSMDTEFPGVIFPQQTKPKFPNHPSYHYQFLKSNVDVLHLIQIGITLSDSDGNLPDLGTGDTRFIWEFNFKDF
        IQIREVW  NL+SE  LI +++D FP V+MDTEFPG++   +    F  +  YHY+ LK+NV++L +IQ+G+T SD  GNLP  GT +   IW+FNF++F
Subjt:  IQIREVWASNLDSEFRLISDLIDRFPCVSMDTEFPGVIFPQQTKPKFPNHPSYHYQFLKSNVDVLHLIQIGITLSDSDGNLPDLGTGDTRFIWEFNFKDF

Query:  DVARDPHAPDSIELLRRQGIDFERNREEGIDSSRFAELMMSSGLVCNESVSWVTFHSAYDFGYLVKILTQQKLPKGLEEFLGVVRVFFGDNVYDMKYMMR
        D+  D +A DSIELLR+ GIDF +N E GIDS RFAEL+MSSG+V NE+V WVTFHS YDFGYL+K+LT Q LP+    F  ++ V+F   VYD+K++M+
Subjt:  DVARDPHAPDSIELLRRQGIDFERNREEGIDSSRFAELMMSSGLVCNESVSWVTFHSAYDFGYLVKILTQQKLPKGLEEFLGVVRVFFGDNVYDMKYMMR

Query:  FCQSLYGGLDRIAKTMNVNRAVGKCHQAGSDSLLTWHAFQKMRDTFFVENEMHKHAGVLYGLEV
        FC SL+GGL+++A+ ++V R VG CHQAGSDSLLT   F+K+++ FF+   M K++GVLYGL V
Subjt:  FCQSLYGGLDRIAKTMNVNRAVGKCHQAGSDSLLTWHAFQKMRDTFFVENEMHKHAGVLYGLEV

AT3G44260.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein7.7e-10771.21Show/hide
Query:  REVWASNLDSEFRLISDLIDRFPCVSMDTEFPGVIFPQQTKPKFPNHPSYHYQFLKSNVDVLHLIQIGITLSDSDGNLPDLGTGDTR-FIWEFNFKDFDV
        REVWA NL+SEF LIS++ID +P +SMDTEFPGVIF  ++  +F N P   Y  LK+NVD L LIQ+G+TLSD +GNLPDLG    R FIWEFNF+DFDV
Subjt:  REVWASNLDSEFRLISDLIDRFPCVSMDTEFPGVIFPQQTKPKFPNHPSYHYQFLKSNVDVLHLIQIGITLSDSDGNLPDLGTGDTR-FIWEFNFKDFDV

Query:  ARDPHAPDSIELLRRQGIDFERNREEGIDSSRFAELMMSSGLVCNESVSWVTFHSAYDFGYLVKILTQQKLPKGLEEFLGVVRVFFGDNVYDMKYMMRFC
        ARD HAPDSIELLRRQGIDFERN  +G++S RFAELMMSSGLVCNE VSWVTFHSAYDFGYL+KILT+++LP  L EF  V+RV FG+ VYD+K+MM+FC
Subjt:  ARDPHAPDSIELLRRQGIDFERNREEGIDSSRFAELMMSSGLVCNESVSWVTFHSAYDFGYLVKILTQQKLPKGLEEFLGVVRVFFGDNVYDMKYMMRFC

Query:  Q-SLYGGLDRIAKTMNVNRAVGKCHQAGSDSLLTWHAFQKMRDTFFVENEMHKHAGVLYGLEVF
        +  L+GGLDR+A+T+ VNRAVGKCHQAGSDSLLTWHAFQ+MRD +FV++   KHAGVLYGLEVF
Subjt:  Q-SLYGGLDRIAKTMNVNRAVGKCHQAGSDSLLTWHAFQKMRDTFFVENEMHKHAGVLYGLEVF

AT5G22250.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein1.4e-11171.16Show/hide
Query:  IQIREVWASNLDSEFRLISDLIDRFPCVSMDTEFPGVIFPQQTKPKFPNHPSYHYQFLKSNVDVLHLIQIGITLSDSDGNLPDL-GTGDTRFIWEFNFKD
        I IR+VWA NL+SEF LI  +++ +P +SMDTEFPGVI+          +P+Y Y  LKSNVD L LIQ+G+TLSD+DGNLPDL G  + R+IWEFNF+D
Subjt:  IQIREVWASNLDSEFRLISDLIDRFPCVSMDTEFPGVIFPQQTKPKFPNHPSYHYQFLKSNVDVLHLIQIGITLSDSDGNLPDL-GTGDTRFIWEFNFKD

Query:  FDVARDPHAPDSIELLRRQGIDFERNREEGIDSSRFAELMMSSGLVCNESVSWVTFHSAYDFGYLVKILTQQKLPKGLEEFLGVVRVFFGDNVYDMKYMM
        FDV RDPHAPDSIELLRR GIDFERNR EG++S RFAELMMSSGL+CNESVSWVTFHSAYDFGYLVKILT+++LP  L EFLG++R FFGD VYD+K++M
Subjt:  FDVARDPHAPDSIELLRRQGIDFERNREEGIDSSRFAELMMSSGLVCNESVSWVTFHSAYDFGYLVKILTQQKLPKGLEEFLGVVRVFFGDNVYDMKYMM

Query:  RFC-QSLYGGLDRIAKTMNVNRAVGKCHQAGSDSLLTWHAFQKMRDTFFVENEMHKHAGVLYGLEVF
        RFC Q LYGGLDR+A+++ VNRAVGKCHQAGSDSLLTW AFQ+MRD +FVE+   KHAGVLYGLEVF
Subjt:  RFC-QSLYGGLDRIAKTMNVNRAVGKCHQAGSDSLLTWHAFQKMRDTFFVENEMHKHAGVLYGLEVF


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCTTATCCACGATCTCAACATCAACCACCAATCCATCCACAAACCCATCCAAATTCGTGAAGTTTGGGCTTCCAATCTCGATTCCGAATTTCGTTTGATCAGCGATCT
CATCGATCGATTCCCTTGCGTTTCAATGGACACGGAGTTCCCCGGAGTCATCTTCCCCCAACAAACCAAACCCAAATTTCCAAATCACCCCTCCTATCACTACCAATTCC
TCAAATCCAACGTCGACGTCCTCCATCTCATCCAGATCGGAATCACTCTCTCCGATTCCGACGGAAACTTGCCGGATCTGGGAACCGGCGACACCCGATTTATCTGGGAG
TTCAACTTTAAGGACTTTGACGTGGCGCGTGACCCCCACGCTCCGGACTCCATCGAGCTTCTCCGCCGTCAGGGCATCGACTTCGAGAGGAACCGAGAGGAAGGGATCGA
TTCGTCACGCTTCGCGGAGTTGATGATGTCATCGGGACTCGTCTGTAACGAGTCAGTGAGTTGGGTGACGTTTCACAGTGCCTATGATTTTGGGTATTTGGTTAAGATTT
TAACCCAGCAAAAGCTTCCGAAAGGGTTAGAAGAATTCCTCGGCGTCGTTAGGGTTTTCTTCGGGGATAACGTGTACGATATGAAGTACATGATGCGGTTCTGCCAGAGT
CTATACGGGGGTTTGGACCGGATAGCGAAAACTATGAATGTGAACCGGGCGGTGGGAAAGTGCCATCAAGCCGGGTCAGATAGCTTGCTGACGTGGCATGCCTTTCAAAA
GATGAGAGATACTTTTTTTGTAGAGAATGAAATGCACAAACATGCTGGGGTTTTGTACGGTTTAGAGGTCTTCTAA
mRNA sequenceShow/hide mRNA sequence
CGAGTCGACTCGCTTACTCTGTGAGTCAAGGACTAATCTAAAAAACGCGTTGAATCAAATACTCTGAACCTTACTACTACTCCCTATCCTCCCACTTTCCTTTTATATTC
CTTTTCCTTTTTCATTCCTATATTAATCTCTCCTCTCTTCTTCTTCTTTTCCATCCGTATTCCTTCAATTCTCTCACTACTTCAATTCTACTTCTTCTTCTTTTTTTTTC
TTTTTTTAAAAAAAAAACAATATAACTTAATTTAATTTAAATTTTCATCATATTCAGCCATGCTTATCCACGATCTCAACATCAACCACCAATCCATCCACAAACCCATC
CAAATTCGTGAAGTTTGGGCTTCCAATCTCGATTCCGAATTTCGTTTGATCAGCGATCTCATCGATCGATTCCCTTGCGTTTCAATGGACACGGAGTTCCCCGGAGTCAT
CTTCCCCCAACAAACCAAACCCAAATTTCCAAATCACCCCTCCTATCACTACCAATTCCTCAAATCCAACGTCGACGTCCTCCATCTCATCCAGATCGGAATCACTCTCT
CCGATTCCGACGGAAACTTGCCGGATCTGGGAACCGGCGACACCCGATTTATCTGGGAGTTCAACTTTAAGGACTTTGACGTGGCGCGTGACCCCCACGCTCCGGACTCC
ATCGAGCTTCTCCGCCGTCAGGGCATCGACTTCGAGAGGAACCGAGAGGAAGGGATCGATTCGTCACGCTTCGCGGAGTTGATGATGTCATCGGGACTCGTCTGTAACGA
GTCAGTGAGTTGGGTGACGTTTCACAGTGCCTATGATTTTGGGTATTTGGTTAAGATTTTAACCCAGCAAAAGCTTCCGAAAGGGTTAGAAGAATTCCTCGGCGTCGTTA
GGGTTTTCTTCGGGGATAACGTGTACGATATGAAGTACATGATGCGGTTCTGCCAGAGTCTATACGGGGGTTTGGACCGGATAGCGAAAACTATGAATGTGAACCGGGCG
GTGGGAAAGTGCCATCAAGCCGGGTCAGATAGCTTGCTGACGTGGCATGCCTTTCAAAAGATGAGAGATACTTTTTTTGTAGAGAATGAAATGCACAAACATGCTGGGGT
TTTGTACGGTTTAGAGGTCTTCTAATCTAAATCTAAAAATGTACCGTAAATAAATTTAATTTTAAAATTATATACCCATATATTATTTGTTTTTTTATTTATTTATTTTC
TAAATAGTTGGCCCATTTTCCATTTTTTTATTTAATTTGAAATGTAAAGTGTATGGAAGGGTGGGAAGGTAATCTTAATTCAAAATATAATTACATAATAAGTAAATATT
ATAGGCTGGCTTTGGTAA
Protein sequenceShow/hide protein sequence
MLIHDLNINHQSIHKPIQIREVWASNLDSEFRLISDLIDRFPCVSMDTEFPGVIFPQQTKPKFPNHPSYHYQFLKSNVDVLHLIQIGITLSDSDGNLPDLGTGDTRFIWE
FNFKDFDVARDPHAPDSIELLRRQGIDFERNREEGIDSSRFAELMMSSGLVCNESVSWVTFHSAYDFGYLVKILTQQKLPKGLEEFLGVVRVFFGDNVYDMKYMMRFCQS
LYGGLDRIAKTMNVNRAVGKCHQAGSDSLLTWHAFQKMRDTFFVENEMHKHAGVLYGLEVF