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IVF0002758 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0002758
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionGag-pro-like protein
Genome locationchr04:5186013..5186291
RNA-Seq ExpressionIVF0002758
SyntenyIVF0002758
Gene Ontology termsGO:0006278 - RNA-dependent DNA biosynthetic process (biological process)
GO:0003964 - RNA-directed DNA polymerase activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0041627.1 uncharacterized protein E6C27_scaffold93G001010 [Cucumis melo var. makuwa]1.34e-54100Show/hide
Query:  MDEQTNDQVQAIRQDIEGLKDQLAKVLKLLTTRREKRVVETSSQVEVDLNKVLENIPAYPPGFIPQRSSSPRMANMTYPTSFLTQNPNPTSQ
        MDEQTNDQVQAIRQDIEGLKDQLAKVLKLLTTRREKRVVETSSQVEVDLNKVLENIPAYPPGFIPQRSSSPRMANMTYPTSFLTQNPNPTSQ
Subjt:  MDEQTNDQVQAIRQDIEGLKDQLAKVLKLLTTRREKRVVETSSQVEVDLNKVLENIPAYPPGFIPQRSSSPRMANMTYPTSFLTQNPNPTSQ

KAA0046607.1 Gag-pro-like protein [Cucumis melo var. makuwa]4.89e-3877.17Show/hide
Query:  MDEQTNDQVQAIRQDIEGLKDQLAKVLKLLTTRREKRVVETSSQVEVDLNKVLENIPAYPPGFIPQRSSSPRMANMTYPTSFLTQNPNPTSQ
        MDEQTNDQVQA+RQD+EGLKDQLAK+L+LLTT R K V  TSSQVEVDLN+VLE++PAYPPGF PQRSSSPRM ++TYPTSF   NPN T+Q
Subjt:  MDEQTNDQVQAIRQDIEGLKDQLAKVLKLLTTRREKRVVETSSQVEVDLNKVLENIPAYPPGFIPQRSSSPRMANMTYPTSFLTQNPNPTSQ

KAA0061241.1 uncharacterized protein E6C27_scaffold455G00760 [Cucumis melo var. makuwa]1.89e-3578.26Show/hide
Query:  MDEQTNDQVQAIRQDIEGLKDQLAKVLKLLTTRREKRVVETSSQVEVDLNKVLENIPAYPPGFIPQRSSSPRMANMTYPTSFLTQNPNPTSQ
        MDEQTNDQVQA+RQD+EGLKDQLAK+L+LLTT R K V  TSSQVEVDLN+VLE++PAYPPGF PQRSSSPRM + TYPTSF T NPN T+Q
Subjt:  MDEQTNDQVQAIRQDIEGLKDQLAKVLKLLTTRREKRVVETSSQVEVDLNKVLENIPAYPPGFIPQRSSSPRMANMTYPTSFLTQNPNPTSQ

TYK09459.1 Gag-pro-like protein [Cucumis melo var. makuwa]5.25e-3571.74Show/hide
Query:  MDEQTNDQVQAIRQDIEGLKDQLAKVLKLLTTRREKRVVETSSQVEVDLNKVLENIPAYPPGFIPQRSSSPRMANMTYPTSFLTQNPNPTSQ
        MDE+TNDQVQA+ QD+EGLKDQL K+L+LLTT R K +V TSSQVE+DL +VLE++PAYP GF PQRSSSPRM + TYPTSF T NPN T+Q
Subjt:  MDEQTNDQVQAIRQDIEGLKDQLAKVLKLLTTRREKRVVETSSQVEVDLNKVLENIPAYPPGFIPQRSSSPRMANMTYPTSFLTQNPNPTSQ

TYK15864.1 Gag-pro-like protein [Cucumis melo var. makuwa]4.87e-3877.17Show/hide
Query:  MDEQTNDQVQAIRQDIEGLKDQLAKVLKLLTTRREKRVVETSSQVEVDLNKVLENIPAYPPGFIPQRSSSPRMANMTYPTSFLTQNPNPTSQ
        MDEQTNDQVQA+ QD+EGLKDQLAK+L+LLTT R K V   SSQVEVDLN+VLE++P YPPGFIPQRSSSPRM + TYPTSF  QNPNPT+Q
Subjt:  MDEQTNDQVQAIRQDIEGLKDQLAKVLKLLTTRREKRVVETSSQVEVDLNKVLENIPAYPPGFIPQRSSSPRMANMTYPTSFLTQNPNPTSQ

TrEMBL top hitse value%identityAlignment
A0A5A7TIZ6 Uncharacterized protein5.5e-41100Show/hide
Query:  MDEQTNDQVQAIRQDIEGLKDQLAKVLKLLTTRREKRVVETSSQVEVDLNKVLENIPAYPPGFIPQRSSSPRMANMTYPTSFLTQNPNPTSQ
        MDEQTNDQVQAIRQDIEGLKDQLAKVLKLLTTRREKRVVETSSQVEVDLNKVLENIPAYPPGFIPQRSSSPRMANMTYPTSFLTQNPNPTSQ
Subjt:  MDEQTNDQVQAIRQDIEGLKDQLAKVLKLLTTRREKRVVETSSQVEVDLNKVLENIPAYPPGFIPQRSSSPRMANMTYPTSFLTQNPNPTSQ

A0A5A7TXF2 Gag-pro-like protein9.6e-3077.17Show/hide
Query:  MDEQTNDQVQAIRQDIEGLKDQLAKVLKLLTTRREKRVVETSSQVEVDLNKVLENIPAYPPGFIPQRSSSPRMANMTYPTSFLTQNPNPTSQ
        MDEQTNDQVQA+RQD+EGLKDQLAK+L+LLTT R K V  TSSQVEVDLN+VLE++PAYPPGF PQRSSSPRM ++TYPTSF   NPN T+Q
Subjt:  MDEQTNDQVQAIRQDIEGLKDQLAKVLKLLTTRREKRVVETSSQVEVDLNKVLENIPAYPPGFIPQRSSSPRMANMTYPTSFLTQNPNPTSQ

A0A5A7V681 Retrotrans_gag domain-containing protein4.3e-3078.26Show/hide
Query:  MDEQTNDQVQAIRQDIEGLKDQLAKVLKLLTTRREKRVVETSSQVEVDLNKVLENIPAYPPGFIPQRSSSPRMANMTYPTSFLTQNPNPTSQ
        MDEQTNDQVQA+RQD+EGLKDQLAK+L+LLTT R K V  TSSQVEVDLN+VLE++PAYPPGF PQRSSSPRM + TYPTSF T NPN T+Q
Subjt:  MDEQTNDQVQAIRQDIEGLKDQLAKVLKLLTTRREKRVVETSSQVEVDLNKVLENIPAYPPGFIPQRSSSPRMANMTYPTSFLTQNPNPTSQ

A0A5A7VAU5 Uncharacterized protein1.6e-2977.17Show/hide
Query:  MDEQTNDQVQAIRQDIEGLKDQLAKVLKLLTTRREKRVVETSSQVEVDLNKVLENIPAYPPGFIPQRSSSPRMANMTYPTSFLTQNPNPTSQ
        MDEQTNDQVQA+RQD+EGLKDQLAK+L+LLTT R K VV TSSQVEVDLN+VLE++P YPPGF PQRSSSPRM + TYPTSF   NPN T+Q
Subjt:  MDEQTNDQVQAIRQDIEGLKDQLAKVLKLLTTRREKRVVETSSQVEVDLNKVLENIPAYPPGFIPQRSSSPRMANMTYPTSFLTQNPNPTSQ

A0A5D3CY34 Gag-pro-like protein1.3e-2977.17Show/hide
Query:  MDEQTNDQVQAIRQDIEGLKDQLAKVLKLLTTRREKRVVETSSQVEVDLNKVLENIPAYPPGFIPQRSSSPRMANMTYPTSFLTQNPNPTSQ
        MDEQTNDQVQA+ QD+EGLKDQLAK+L+LLTT R K V   SSQVEVDLN+VLE++P YPPGFIPQRSSSPRM + TYPTSF  QNPNPT+Q
Subjt:  MDEQTNDQVQAIRQDIEGLKDQLAKVLKLLTTRREKRVVETSSQVEVDLNKVLENIPAYPPGFIPQRSSSPRMANMTYPTSFLTQNPNPTSQ

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATGAGCAAACCAATGATCAGGTTCAAGCAATTCGTCAAGACATTGAAGGATTGAAAGATCAATTGGCAAAGGTCCTGAAATTGCTCACTACTAGAAGAGAAAAGAG
AGTTGTGGAGACTTCATCACAAGTGGAAGTTGATCTGAACAAGGTACTAGAGAACATACCTGCATACCCTCCGGGTTTTATTCCTCAAAGATCGTCCAGTCCACGCATGG
CGAATATGACATATCCTACATCCTTTCTCACGCAAAATCCTAACCCGACCTCACAATAG
mRNA sequenceShow/hide mRNA sequence
ATGGATGAGCAAACCAATGATCAGGTTCAAGCAATTCGTCAAGACATTGAAGGATTGAAAGATCAATTGGCAAAGGTCCTGAAATTGCTCACTACTAGAAGAGAAAAGAG
AGTTGTGGAGACTTCATCACAAGTGGAAGTTGATCTGAACAAGGTACTAGAGAACATACCTGCATACCCTCCGGGTTTTATTCCTCAAAGATCGTCCAGTCCACGCATGG
CGAATATGACATATCCTACATCCTTTCTCACGCAAAATCCTAACCCGACCTCACAATAG
Protein sequenceShow/hide protein sequence
MDEQTNDQVQAIRQDIEGLKDQLAKVLKLLTTRREKRVVETSSQVEVDLNKVLENIPAYPPGFIPQRSSSPRMANMTYPTSFLTQNPNPTSQ