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IVF0002762 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0002762
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionRibonuclease E
Genome locationchr11:28082797..28083284
RNA-Seq ExpressionIVF0002762
SyntenyIVF0002762
Gene Ontology termsGO:0090304 - nucleic acid metabolic process (biological process)
GO:0005488 - binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7169981.1 Nitric oxide synthase-like [Homarus americanus]6.58e-0650.77Show/hide
Query:  ENRLVGVESKPVVVESGLVEVENGPAVVENGPAVVENGPVVVENGPVEVENTPVVVENGSVGVES
        EN    VE+ P  VE+    VEN P  VEN PA VEN P  VEN P  VEN+P  VEN    VE+
Subjt:  ENRLVGVESKPVVVESGLVEVENGPAVVENGPAVVENGPVVVENGPVEVENTPVVVENGSVGVES

KRA29761.1 ribonuclease E [Nocardioides sp. Root614]1.09e-0658.62Show/hide
Query:  VESKPVVVESGLVEVENGPAVVENGPAVVENGPVVVENGPVEVENTPVVVENGSVGVE
        V+  PVVVE   V VE  P VVE  P VVE  PVVVE  PV VE  PVVVE  +V VE
Subjt:  VESKPVVVESGLVEVENGPAVVENGPAVVENGPVVVENGPVEVENTPVVVENGSVGVE

WP_082574109.1 MULTISPECIES: Rne/Rng family ribonuclease [unclassified Nocardioides]1.09e-0658.62Show/hide
Query:  VESKPVVVESGLVEVENGPAVVENGPAVVENGPVVVENGPVEVENTPVVVENGSVGVE
        V+  PVVVE   V VE  P VVE  P VVE  PVVVE  PV VE  PVVVE  +V VE
Subjt:  VESKPVVVESGLVEVENGPAVVENGPAVVENGPVVVENGPVEVENTPVVVENGSVGVE

WP_182377257.1 Rne/Rng family ribonuclease [Nocardioides sp. WS12]1.09e-0658.62Show/hide
Query:  VESKPVVVESGLVEVENGPAVVENGPAVVENGPVVVENGPVEVENTPVVVENGSVGVE
        V+  PVVVE   V VE  P VVE  P VVE  PVVVE  PV VE  PVVVE   V VE
Subjt:  VESKPVVVESGLVEVENGPAVVENGPAVVENGPVVVENGPVEVENTPVVVENGSVGVE

XP_022157699.1 uncharacterized protein LOC111024355, partial [Momordica charantia]9.50e-1146.09Show/hide
Query:  MILLSNRETMVEVVMRIGSRHLVGGSHLQMMV--VVKSQEEEEMQSEVVEIELVVEGSRQVEAENRLVGVESKPVVVESGLVEVENGPAVVENGPAVVEN
        M+  S + T+V   MR GS++LV GS  +++V  VV    EEE + EV E  L V GS  V  E R V V + PVV  S  V V + P VVEN   VV +
Subjt:  MILLSNRETMVEVVMRIGSRHLVGGSHLQMMV--VVKSQEEEEMQSEVVEIELVVEGSRQVEAENRLVGVESKPVVVESGLVEVENGPAVVENGPAVVEN

Query:  GPVVVENGPVEVENTPVVVENGSVGVES
         PVV  NGP  V N PVV  NG V V S
Subjt:  GPVVVENGPVEVENTPVVVENGSVGVES

TrEMBL top hitse value%identityAlignment
A0A0A0KA06 Uncharacterized protein1.8e-2463.77Show/hide
Query:  MILLSNRETMVEVVMRIGSRHLVGGSHLQMMVVVKS--QEEEEMQSEVVEIELVVEGSRQVEAENRLVGVESKPVVVESGLVEVENGPAVVENGPAVVEN
        M LLSNRETMVE VMRIGSR+LVGGSHLQMMVVVK+  +EEEEM  EVVEI LVV  SRQV  E++LV VE +PV VES  V V NG   VE+G  VV +
Subjt:  MILLSNRETMVEVVMRIGSRHLVGGSHLQMMVVVKS--QEEEEMQSEVVEIELVVEGSRQVEAENRLVGVESKPVVVESGLVEVENGPAVVENGPAVVEN

Query:  GPVVVENGPVEVENTPVVVENGSVGVESKLWTGGGGGE
        G  VVE+  V VE+  V VE+ SV VE K  +G GGGE
Subjt:  GPVVVENGPVEVENTPVVVENGSVGVESKLWTGGGGGE

A0A0Q8DRE5 Ribonuclease E3.5e-0443.62Show/hide
Query:  VVVKSQEEEEMQSEVVEIELVVEGSRQVEAENRLVGVESKPVVVESGLVEVENGPAVVENGPAVVENGPVVVENGPVEVENTPVVVENGSVGVE
        V   ++  +E   +  +   VV     V  E   V VE  PVVVE   V VE  P VVE  P VVE  PVVVE   V VE  PVVVE   V VE
Subjt:  VVVKSQEEEEMQSEVVEIELVVEGSRQVEAENRLVGVESKPVVVESGLVEVENGPAVVENGPAVVENGPVVVENGPVEVENTPVVVENGSVGVE

A0A0Q8HQW8 Ribonuclease E3.5e-0443.62Show/hide
Query:  VVVKSQEEEEMQSEVVEIELVVEGSRQVEAENRLVGVESKPVVVESGLVEVENGPAVVENGPAVVENGPVVVENGPVEVENTPVVVENGSVGVE
        V   ++  +E   +  +   VV     V  E   V VE  PVVVE   V VE  P VVE  P VVE  PVVVE   V VE  PVVVE   V VE
Subjt:  VVVKSQEEEEMQSEVVEIELVVEGSRQVEAENRLVGVESKPVVVESGLVEVENGPAVVENGPAVVENGPVVVENGPVEVENTPVVVENGSVGVE

A0A6J1DXA8 uncharacterized protein LOC1110243551.8e-0846.09Show/hide
Query:  MILLSNRETMVEVVMRIGSRHLVGGSHLQMMV--VVKSQEEEEMQSEVVEIELVVEGSRQVEAENRLVGVESKPVVVESGLVEVENGPAVVENGPAVVEN
        M+  S + T+V   MR GS++LV GS  +++V  VV    EEE + EV E  L V GS  V  E R V V + PVV  S  V V + P VVEN   VV +
Subjt:  MILLSNRETMVEVVMRIGSRHLVGGSHLQMMV--VVKSQEEEEMQSEVVEIELVVEGSRQVEAENRLVGVESKPVVVESGLVEVENGPAVVENGPAVVEN

Query:  GPVVVENGPVEVENTPVVVENGSVGVES
         PVV  NGP  V N PVV  NG V V S
Subjt:  GPVVVENGPVEVENTPVVVENGSVGVES

U6LFW5 UmuC domain-containing protein4.6e-0451.67Show/hide
Query:  VGVESKPVVVESGLVEVENGPAVVENGPAVVENGPVVVENGPVEVENTPVVVENGSVGVE
        +GVE  P  VE G  +VE GP  VE GP  VE GP+ VE GP +VE  P+ +E G +GVE
Subjt:  VGVESKPVVVESGLVEVENGPAVVENGPAVVENGPVVVENGPVEVENTPVVVENGSVGVE

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATACTCCTCAGTAACCGGGAAACAATGGTGGAGGTGGTGATGCGTATTGGAAGCCGACATTTGGTGGGAGGATCACATCTTCAAATGATGGTGGTGGTGAAGAGTCA
AGAGGAGGAGGAGATGCAGTCGGAGGTGGTGGAGATTGAACTGGTGGTGGAGGGGAGTAGACAGGTGGAGGCGGAGAATAGACTGGTGGGGGTGGAGAGTAAACCGGTGG
TGGTGGAGAGTGGATTGGTGGAGGTGGAGAATGGACCGGCGGTGGTGGAGAATGGACCGGCGGTGGTGGAGAATGGACCGGTGGTGGTGGAGAATGGACCGGTGGAGGTG
GAGAATACACCGGTGGTGGTGGAGAATGGATCGGTGGGGGTGGAGAGTAAACTGTGGACCGGTGGAGGTGGTGGGGAGTAA
mRNA sequenceShow/hide mRNA sequence
ATGATACTCCTCAGTAACCGGGAAACAATGGTGGAGGTGGTGATGCGTATTGGAAGCCGACATTTGGTGGGAGGATCACATCTTCAAATGATGGTGGTGGTGAAGAGTCA
AGAGGAGGAGGAGATGCAGTCGGAGGTGGTGGAGATTGAACTGGTGGTGGAGGGGAGTAGACAGGTGGAGGCGGAGAATAGACTGGTGGGGGTGGAGAGTAAACCGGTGG
TGGTGGAGAGTGGATTGGTGGAGGTGGAGAATGGACCGGCGGTGGTGGAGAATGGACCGGCGGTGGTGGAGAATGGACCGGTGGTGGTGGAGAATGGACCGGTGGAGGTG
GAGAATACACCGGTGGTGGTGGAGAATGGATCGGTGGGGGTGGAGAGTAAACTGTGGACCGGTGGAGGTGGTGGGGAGTAA
Protein sequenceShow/hide protein sequence
MILLSNRETMVEVVMRIGSRHLVGGSHLQMMVVVKSQEEEEMQSEVVEIELVVEGSRQVEAENRLVGVESKPVVVESGLVEVENGPAVVENGPAVVENGPVVVENGPVEV
ENTPVVVENGSVGVESKLWTGGGGGE