CuGenDBv2

Gene ID	IVF0002824
Organism	Cucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Description	glycine-rich protein
Genome location	chr11:27137664..27138265
RNA-Seq Expression	IVF0002824
Synteny	IVF0002824
Gene Ontology terms	NA
InterPro domains	NA

Homology

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GenBank top hits

e value

%identity

Alignment

KAE8647089.1 hypothetical protein Csa_023033 [Cucumis sativus]

6.35e-94

82.89

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Query:  MVANNSIGFAKLLNRLDFVSNYCISATDSITDQIPSSSTAASLRLSAALFPVATIAPPPVKSVSNRSASRTFLRRKRRTKRRLYSDDSEGREDDGFGGGD
        MVANNSIGFAKLLNRLDFVSNYCIS TDSITDQIP SSTAA+LRLSAALFPVATIAPPPVKSVS RSASRTFLRRKRRTKRRLYSDDSEGREDDGFGGGD
Subjt:  MVANNSIGFAKLLNRLDFVSNYCISATDSITDQIPSSSTAASLRLSAALFPVATIAPPPVKSVSNRSASRTFLRRKRRTKRRLYSDDSEGREDDGFGGGD

Query:  FDGPYGGDGGGGGGGR------------------------AYYFVYEVVCWIALSNCVHFAFKKVVRFAAEAFGNSERGKLSMRLIS
        FDGP GGDGGG GGGR                        AYYFVYEVVCWIALSNCVHFAFKKVVRFAAEA GNSERGKL+MRLIS
Subjt:  FDGPYGGDGGGGGGGR------------------------AYYFVYEVVCWIALSNCVHFAFKKVVRFAAEAFGNSERGKLSMRLIS

XP_008458406.1 PREDICTED: uncharacterized protein LOC103497828 [Cucumis melo]

8.71e-110

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Query:  MDSSLVAGTLSMVANNSIGFAKLLNRLDFVSNYCISATDSITDQIPSSSTAASLRLSAALFPVATIAPPPVKSVSNRSASRTFLRRKRRTKRRLYSDDSE
        MDSSLVAGTLSMVANNSIGFAKLLNRLDFVSNYCISATDSITDQIPSSSTAASLRLSAALFPVATIAPPPVKSVSNRSASRTFLRRKRRTKRRLYSDDSE
Subjt:  MDSSLVAGTLSMVANNSIGFAKLLNRLDFVSNYCISATDSITDQIPSSSTAASLRLSAALFPVATIAPPPVKSVSNRSASRTFLRRKRRTKRRLYSDDSE

Query:  GREDDGFGGGDFDGPYGGDGGGGGGGR------------------------AYYFVYEVVCWIALSNCVHFAFKKVVRFAAEAFGNSERGKLSMRLISVC
        GREDDGFGGGDFDGPYGGDGGGGGGGR                        AYYFVYEVVCWIALSNCVHFAFKKVVRFAAEAFGNSERGKLSMRLISVC
Subjt:  GREDDGFGGGDFDGPYGGDGGGGGGGR------------------------AYYFVYEVVCWIALSNCVHFAFKKVVRFAAEAFGNSERGKLSMRLISVC

XP_011657286.1 uncharacterized protein LOC105435841 [Cucumis sativus]

3.11e-103

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Query:  MDSSLVAGTLSMVANNSIGFAKLLNRLDFVSNYCISATDSITDQIPSSSTAASLRLSAALFPVATIAPPPVKSVSNRSASRTFLRRKRRTKRRLYSDDSE
        MDSSLVAGTLSMVANNSIGFAKLLNRLDFVSNYCIS TDSITDQIP SSTAA+LRLSAALFPVATIAPPPVKSVS RSASRTFLRRKRRTKRRLYSDDSE
Subjt:  MDSSLVAGTLSMVANNSIGFAKLLNRLDFVSNYCISATDSITDQIPSSSTAASLRLSAALFPVATIAPPPVKSVSNRSASRTFLRRKRRTKRRLYSDDSE

Query:  GREDDGFGGGDFDGPYGGDGGGGGGGR------------------------AYYFVYEVVCWIALSNCVHFAFKKVVRFAAEAFGNSERGKLSMRLISVC
        GREDDGFGGGDFDGP GGDGGG GGGR                        AYYFVYEVVCWIALSNCVHFAFKKVVRFAAEA GNSERGKL+MRLISVC
Subjt:  GREDDGFGGGDFDGPYGGDGGGGGGGR------------------------AYYFVYEVVCWIALSNCVHFAFKKVVRFAAEAFGNSERGKLSMRLISVC

XP_022138602.1 uncharacterized protein LOC111009719 [Momordica charantia]

1.33e-92

76.77

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Query:  MDSSLVAGTLSMVANNSIGFAKLLNRLDFVSNYCISATDSITDQIPSSSTAASLRLSAALFPVATIAPPPVKSVSNRSASRTFLRRKRRTKRRLYSDDSE
        MDSSLVAGTLSM ANN +GFAK LNRLDFVSNYC+SA+DSIT+QIP SS A +L+LSAALFPVATIAPPPVKS+S RSASRTFLRRKRRTKRRLYSDDSE
Subjt:  MDSSLVAGTLSMVANNSIGFAKLLNRLDFVSNYCISATDSITDQIPSSSTAASLRLSAALFPVATIAPPPVKSVSNRSASRTFLRRKRRTKRRLYSDDSE

Query:  GREDDGFGGGDFDGPYGGDGGGGGGG----------------------RAYYFVYEVVCWIALSNCVHFAFKKVVRFAAEAFGNSERGKLSMRLISVC
        G EDDGFGG +FDG YGG GGG G G                       AYYFVYEVVCWIALSNCVHFAFKKVVRFAA+A GNSERGKLSMRLISVC
Subjt:  GREDDGFGGGDFDGPYGGDGGGGGGG----------------------RAYYFVYEVVCWIALSNCVHFAFKKVVRFAAEAFGNSERGKLSMRLISVC

XP_038874866.1 uncharacterized protein LOC120067363 [Benincasa hispida]

3.55e-95

78.39

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Query:  MDSSLVAGTLSMVANNSIGFAKLLNRLDFVSNYCISATDSITDQIPSSSTAASLRLSAALFPVATIAPPPVKSVSNRSASRTFLRRKRRTKRRLYSDDSE
        MDSSLVAGTLSMVANN IGFAK LNRLDFVSNYCISATDS+TDQI  SS A +L+LSAALFP+ATIAPPPVKSVS RSASRTFLRRKRRTKRRLYS DSE
Subjt:  MDSSLVAGTLSMVANNSIGFAKLLNRLDFVSNYCISATDSITDQIPSSSTAASLRLSAALFPVATIAPPPVKSVSNRSASRTFLRRKRRTKRRLYSDDSE

Query:  GREDDGFGGGDFDGPYGGDGGGGGG-----------------------GRAYYFVYEVVCWIALSNCVHFAFKKVVRFAAEAFGNSERGKLSMRLISVC
        GREDDGF GGDFDGPYGGDG  GGG                         AYYFVYEVVCWIALSNCVHFAFKKVVRFA EA GNSERGK+SMRLISVC
Subjt:  GREDDGFGGGDFDGPYGGDGGGGGG-----------------------GRAYYFVYEVVCWIALSNCVHFAFKKVVRFAAEAFGNSERGKLSMRLISVC

TrEMBL top hits

e value

%identity

Alignment

A0A0A0KG90 Uncharacterized protein

1.3e-78

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Query:  MDSSLVAGTLSMVANNSIGFAKLLNRLDFVSNYCISATDSITDQIPSSSTAASLRLSAALFPVATIAPPPVKSVSNRSASRTFLRRKRRTKRRLYSDDSE
        MDSSLVAGTLSMVANNSIGFAKLLNRLDFVSNYCIS TDSITDQIP SSTAA+LRLSAALFPVATIAPPPVKSVS RSASRTFLRRKRRTKRRLYSDDSE
Subjt:  MDSSLVAGTLSMVANNSIGFAKLLNRLDFVSNYCISATDSITDQIPSSSTAASLRLSAALFPVATIAPPPVKSVSNRSASRTFLRRKRRTKRRLYSDDSE

Query:  GREDDGFGGGDFDGPYGGDGGGGGGGR------------------------AYYFVYEVVCWIALSNCVHFAFKKVVRFAAEAFGNSERGKLSMRLISVC
        GREDDGFGGGDFDGP GGDGGG GGGR                        AYYFVYEVVCWIALSNCVHFAFKKVVRFAAEA GNSERGKL+MRLISVC
Subjt:  GREDDGFGGGDFDGPYGGDGGGGGGGR------------------------AYYFVYEVVCWIALSNCVHFAFKKVVRFAAEAFGNSERGKLSMRLISVC

A0A1S3C7S8 uncharacterized protein LOC103497828

1.3e-83

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Query:  MDSSLVAGTLSMVANNSIGFAKLLNRLDFVSNYCISATDSITDQIPSSSTAASLRLSAALFPVATIAPPPVKSVSNRSASRTFLRRKRRTKRRLYSDDSE
        MDSSLVAGTLSMVANNSIGFAKLLNRLDFVSNYCISATDSITDQIPSSSTAASLRLSAALFPVATIAPPPVKSVSNRSASRTFLRRKRRTKRRLYSDDSE
Subjt:  MDSSLVAGTLSMVANNSIGFAKLLNRLDFVSNYCISATDSITDQIPSSSTAASLRLSAALFPVATIAPPPVKSVSNRSASRTFLRRKRRTKRRLYSDDSE

Query:  GREDDGFGGGDFDGPYGGDGGGGGGGR------------------------AYYFVYEVVCWIALSNCVHFAFKKVVRFAAEAFGNSERGKLSMRLISVC
        GREDDGFGGGDFDGPYGGDGGGGGGGR                        AYYFVYEVVCWIALSNCVHFAFKKVVRFAAEAFGNSERGKLSMRLISVC
Subjt:  GREDDGFGGGDFDGPYGGDGGGGGGGR------------------------AYYFVYEVVCWIALSNCVHFAFKKVVRFAAEAFGNSERGKLSMRLISVC

A0A6J1CBL0 uncharacterized protein LOC111009719

1.6e-70

76.77

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Query:  MDSSLVAGTLSMVANNSIGFAKLLNRLDFVSNYCISATDSITDQIPSSSTAASLRLSAALFPVATIAPPPVKSVSNRSASRTFLRRKRRTKRRLYSDDSE
        MDSSLVAGTLSM ANN +GFAK LNRLDFVSNYC+SA+DSIT+QIP SS A +L+LSAALFPVATIAPPPVKS+S RSASRTFLRRKRRTKRRLYSDDSE
Subjt:  MDSSLVAGTLSMVANNSIGFAKLLNRLDFVSNYCISATDSITDQIPSSSTAASLRLSAALFPVATIAPPPVKSVSNRSASRTFLRRKRRTKRRLYSDDSE

Query:  GREDDGFGGGDFDGPYGGDGGGGGGG----------------------RAYYFVYEVVCWIALSNCVHFAFKKVVRFAAEAFGNSERGKLSMRLISVC
        G EDDGFGG +FDG YGG GGG G G                       AYYFVYEVVCWIALSNCVHFAFKKVVRFAA+A GNSERGKLSMRLISVC
Subjt:  GREDDGFGGGDFDGPYGGDGGGGGGG----------------------RAYYFVYEVVCWIALSNCVHFAFKKVVRFAAEAFGNSERGKLSMRLISVC

A0A6J1H560 uncharacterized protein LOC111460236

3.8e-67

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Query:  MDSSLVAGTLSMVANNSIGFAKLLNRLDFVSNYCISATDSITDQIPSSSTAASLRLSAALFPVATIAPPPVKSVSNRSASRTFLRRKRRTKRRLYS-DDS
        MD+SLVAGTLSMVANN +GFAK LNRLD +SNY  SATDSITDQIP SS A +L+LSAALFPVATIAPPPVKS+S RS+SR FLRRKRRTKRRLYS DDS
Subjt:  MDSSLVAGTLSMVANNSIGFAKLLNRLDFVSNYCISATDSITDQIPSSSTAASLRLSAALFPVATIAPPPVKSVSNRSASRTFLRRKRRTKRRLYS-DDS

Query:  EGREDDGFGGGDFDGPYGGDGGGGGG-----------------------GRAYYFVYEVVCWIALSNCVHFAFKKVVRFAAEAFGNSERGKLSMRLISVC
        EG ED+GF GGDFDGPYGGDGGGGGG                         AYYFVYEVVCWIALSNCVHFAFKKVVRFAAEA GNSER KL +RLISVC
Subjt:  EGREDDGFGGGDFDGPYGGDGGGGGG-----------------------GRAYYFVYEVVCWIALSNCVHFAFKKVVRFAAEAFGNSERGKLSMRLISVC

A0A6J1KZI4 uncharacterized protein LOC111499005

1.1e-66

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Query:  MDSSLVAGTLSMVANNSIGFAKLLNRLDFVSNYCISATDSITDQIPSSSTAASLRLSAALFPVATIAPPPVKSVSNRSASRTFLRRKRRTKRRLY-SDDS
        MD+SLVAGTLS+VANN +GFAK LNRLD +SNY ISATDSITDQIP SS A +L+LS ALFPVATIAPPPVKS+S RS+SRTFLRRKRRTKRRLY SDDS
Subjt:  MDSSLVAGTLSMVANNSIGFAKLLNRLDFVSNYCISATDSITDQIPSSSTAASLRLSAALFPVATIAPPPVKSVSNRSASRTFLRRKRRTKRRLY-SDDS

Query:  EGREDDGFGGGDFDGPYGGDGGGGGG-----------------------GRAYYFVYEVVCWIALSNCVHFAFKKVVRFAAEAFGNSERGKLSMRLISVC
        EG ED+GF  GDFDGPYGGDGGGGGG                         AYYFVYEVVCWIALSNCVHFAFKKVVRFAAEA GNSER KL MRLISVC
Subjt:  EGREDDGFGGGDFDGPYGGDGGGGGG-----------------------GRAYYFVYEVVCWIALSNCVHFAFKKVVRFAAEAFGNSERGKLSMRLISVC

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT3G06780.1 glycine-rich protein

5.3e-21

40.28

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Query:  MDSSLVAGTLSM-VANNSIGFAK-LLNRLDFVSNYCISATDSITDQIPSSSTAASLRLSAALFPVATIAPPPVKSVSNRSASRTFLRRKRRTKRRLYSDD
        M+ SL+A T+++  A   I F K LL RLD  ++  IS  DS+ D    S     ++ SA +FPV  IAPPPV+S S ++  R  +R+KRRT+R  +  D
Subjt:  MDSSLVAGTLSM-VANNSIGFAK-LLNRLDFVSNYCISATDSITDQIPSSSTAASLRLSAALFPVATIAPPPVKSVSNRSASRTFLRRKRRTKRRLYSDD

Query:  SEGREDDG-------FGGGDFDGPYGGDG----------GGGGGG----------------RAYYFVYEVVCWIALSNCVHFAFKKVVRFAAEAFGNSER
         +   D G       FGG D    +GG G          GGGGGG                 A  FVYEV+CWIALSNCVHFAFK++VR   +     ER
Subjt:  SEGREDDG-------FGGGDFDGPYGGDG----------GGGGGG----------------RAYYFVYEVVCWIALSNCVHFAFKKVVRFAAEAFGNSER

Query:  GKLSMRLISVC
         KL++ L  VC
Subjt:  GKLSMRLISVC

Sequences

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CDS sequence

Show/hide CDS sequence

ATGGATTCCTCTCTGGTTGCCGGAACCCTTTCAATGGTTGCCAACAATAGCATCGGCTTCGCAAAACTCCTCAATCGCCTCGATTTCGTCTCCAATTACTGTATCTCCGC
CACCGATTCAATCACCGACCAGATCCCATCGTCTTCCACCGCCGCAAGTCTTCGATTATCTGCCGCACTTTTCCCCGTCGCAACCATTGCTCCGCCCCCTGTTAAATCGG
TTTCCAACCGATCGGCCTCTCGGACATTTCTCCGTAGAAAGCGTCGCACGAAACGTAGATTGTATAGTGATGATTCCGAGGGACGCGAGGACGATGGATTCGGCGGCGGC
GATTTTGATGGACCGTATGGTGGAGATGGGGGTGGCGGCGGCGGTGGTAGAGCGTATTATTTCGTTTACGAGGTGGTTTGTTGGATTGCGTTATCAAATTGTGTTCATTT
TGCGTTCAAGAAGGTTGTTAGATTTGCAGCAGAAGCATTTGGGAATTCCGAAAGGGGAAAATTGTCCATGAGATTAATCTCCGTTTGTTGA

mRNA sequence

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Protein sequence

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MDSSLVAGTLSMVANNSIGFAKLLNRLDFVSNYCISATDSITDQIPSSSTAASLRLSAALFPVATIAPPPVKSVSNRSASRTFLRRKRRTKRRLYSDDSEGREDDGFGGG
DFDGPYGGDGGGGGGGRAYYFVYEVVCWIALSNCVHFAFKKVVRFAAEAFGNSERGKLSMRLISVC

IVF0002824 (gene) of Melon (IVF77) v1 genome