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IVF0002838 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0002838
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionTubulin-specific chaperone A
Genome locationchr11:30392974..30395546
RNA-Seq ExpressionIVF0002838
SyntenyIVF0002838
Gene Ontology termsGO:0007021 - tubulin complex assembly (biological process)
GO:0007023 - post-chaperonin tubulin folding pathway (biological process)
GO:0005737 - cytoplasm (cellular component)
GO:0005874 - microtubule (cellular component)
GO:0048487 - beta-tubulin binding (molecular function)
InterPro domainsIPR004226 - Tubulin binding cofactor A
IPR036126 - Tubulin binding cofactor A superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0039980.1 tubulin-folding cofactor A [Cucumis melo var. makuwa]4.89e-69100Show/hide
Query:  MATVKNLKIKTATCKRILKELFSYEKEVEREASKTADMKEKGADPYDLKQQENVLAESRMMVPDCHKRLEVALADLKEALAELEKSTEEKGPEFDDARST
        MATVKNLKIKTATCKRILKELFSYEKEVEREASKTADMKEKGADPYDLKQQENVLAESRMMVPDCHKRLEVALADLKEALAELEKSTEEKGPEFDDARST
Subjt:  MATVKNLKIKTATCKRILKELFSYEKEVEREASKTADMKEKGADPYDLKQQENVLAESRMMVPDCHKRLEVALADLKEALAELEKSTEEKGPEFDDARST

Query:  INDIESFLKPTEE
        INDIESFLKPTEE
Subjt:  INDIESFLKPTEE

TYK24522.1 tubulin-folding cofactor A [Cucumis melo var. makuwa]3.03e-67100Show/hide
Query:  MATVKNLKIKTATCKRILKELFSYEKEVEREASKTADMKEKGADPYDLKQQENVLAESRMMVPDCHKRLEVALADLKEALAELEKSTEEKGPEFDDARST
        MATVKNLKIKTATCKRILKELFSYEKEVEREASKTADMKEKGADPYDLKQQENVLAESRMMVPDCHKRLEVALADLKEALAELEKSTEEKGPEFDDARST
Subjt:  MATVKNLKIKTATCKRILKELFSYEKEVEREASKTADMKEKGADPYDLKQQENVLAESRMMVPDCHKRLEVALADLKEALAELEKSTEEKGPEFDDARST

Query:  INDIESFLKPTEE
        INDIESFLKPTEE
Subjt:  INDIESFLKPTEE

XP_004145016.1 tubulin-folding cofactor A isoform X2 [Cucumis sativus]1.01e-6594.69Show/hide
Query:  MATVKNLKIKTATCKRILKELFSYEKEVEREASKTADMKEKGADPYDLKQQENVLAESRMMVPDCHKRLEVALADLKEALAELEKSTEEKGPEFDDARST
        MATVKNLKIKTATCKRILKELFSYEKEVEREA+KTADMKEKGADPYDLKQQENVLAESRMMVPDCHKRLE ALADLK+ALAELEKST+EKGPEFDDARST
Subjt:  MATVKNLKIKTATCKRILKELFSYEKEVEREASKTADMKEKGADPYDLKQQENVLAESRMMVPDCHKRLEVALADLKEALAELEKSTEEKGPEFDDARST

Query:  INDIESFLKPTEE
        IND+ESFLKP EE
Subjt:  INDIESFLKPTEE

XP_008460084.1 PREDICTED: tubulin-folding cofactor A [Cucumis melo]1.40e-6899.12Show/hide
Query:  MATVKNLKIKTATCKRILKELFSYEKEVEREASKTADMKEKGADPYDLKQQENVLAESRMMVPDCHKRLEVALADLKEALAELEKSTEEKGPEFDDARST
        MATVKNLKIKTATCKRILKELFSYEKEVEREASKTADMKEKGADPYDLKQQENVLAESRMMVPDCHKRLEVALADLKEALA+LEKSTEEKGPEFDDARST
Subjt:  MATVKNLKIKTATCKRILKELFSYEKEVEREASKTADMKEKGADPYDLKQQENVLAESRMMVPDCHKRLEVALADLKEALAELEKSTEEKGPEFDDARST

Query:  INDIESFLKPTEE
        INDIESFLKPTEE
Subjt:  INDIESFLKPTEE

XP_022155762.1 tubulin-folding cofactor A [Momordica charantia]2.05e-5985.84Show/hide
Query:  MATVKNLKIKTATCKRILKELFSYEKEVEREASKTADMKEKGADPYDLKQQENVLAESRMMVPDCHKRLEVALADLKEALAELEKSTEEKGPEFDDARST
        MATV+NLKIKTATCKRI+KEL SYEKEVEREA+KTADMKEKGADPYDLKQQENVLAESRMM+PDCHKRLE +LADLK ALAELE+ST+EKGPEFD+ARST
Subjt:  MATVKNLKIKTATCKRILKELFSYEKEVEREASKTADMKEKGADPYDLKQQENVLAESRMMVPDCHKRLEVALADLKEALAELEKSTEEKGPEFDDARST

Query:  INDIESFLKPTEE
        I+++E+FLK TEE
Subjt:  INDIESFLKPTEE

TrEMBL top hitse value%identityAlignment
A0A0A0KER0 Tubulin-specific chaperone A6.0e-5094.69Show/hide
Query:  MATVKNLKIKTATCKRILKELFSYEKEVEREASKTADMKEKGADPYDLKQQENVLAESRMMVPDCHKRLEVALADLKEALAELEKSTEEKGPEFDDARST
        MATVKNLKIKTATCKRILKELFSYEKEVEREA+KTADMKEKGADPYDLKQQENVLAESRMMVPDCHKRLE ALADLK+ALAELEKST+EKGPEFDDARST
Subjt:  MATVKNLKIKTATCKRILKELFSYEKEVEREASKTADMKEKGADPYDLKQQENVLAESRMMVPDCHKRLEVALADLKEALAELEKSTEEKGPEFDDARST

Query:  INDIESFLKPTEE
        IND+ESFLKP EE
Subjt:  INDIESFLKPTEE

A0A1S3CBQ5 Tubulin-specific chaperone A4.9e-5299.12Show/hide
Query:  MATVKNLKIKTATCKRILKELFSYEKEVEREASKTADMKEKGADPYDLKQQENVLAESRMMVPDCHKRLEVALADLKEALAELEKSTEEKGPEFDDARST
        MATVKNLKIKTATCKRILKELFSYEKEVEREASKTADMKEKGADPYDLKQQENVLAESRMMVPDCHKRLEVALADLKEALA+LEKSTEEKGPEFDDARST
Subjt:  MATVKNLKIKTATCKRILKELFSYEKEVEREASKTADMKEKGADPYDLKQQENVLAESRMMVPDCHKRLEVALADLKEALAELEKSTEEKGPEFDDARST

Query:  INDIESFLKPTEE
        INDIESFLKPTEE
Subjt:  INDIESFLKPTEE

A0A5A7T9L5 Tubulin-specific chaperone A2.2e-52100Show/hide
Query:  MATVKNLKIKTATCKRILKELFSYEKEVEREASKTADMKEKGADPYDLKQQENVLAESRMMVPDCHKRLEVALADLKEALAELEKSTEEKGPEFDDARST
        MATVKNLKIKTATCKRILKELFSYEKEVEREASKTADMKEKGADPYDLKQQENVLAESRMMVPDCHKRLEVALADLKEALAELEKSTEEKGPEFDDARST
Subjt:  MATVKNLKIKTATCKRILKELFSYEKEVEREASKTADMKEKGADPYDLKQQENVLAESRMMVPDCHKRLEVALADLKEALAELEKSTEEKGPEFDDARST

Query:  INDIESFLKPTEE
        INDIESFLKPTEE
Subjt:  INDIESFLKPTEE

A0A5D3DLX2 Tubulin-specific chaperone A2.2e-52100Show/hide
Query:  MATVKNLKIKTATCKRILKELFSYEKEVEREASKTADMKEKGADPYDLKQQENVLAESRMMVPDCHKRLEVALADLKEALAELEKSTEEKGPEFDDARST
        MATVKNLKIKTATCKRILKELFSYEKEVEREASKTADMKEKGADPYDLKQQENVLAESRMMVPDCHKRLEVALADLKEALAELEKSTEEKGPEFDDARST
Subjt:  MATVKNLKIKTATCKRILKELFSYEKEVEREASKTADMKEKGADPYDLKQQENVLAESRMMVPDCHKRLEVALADLKEALAELEKSTEEKGPEFDDARST

Query:  INDIESFLKPTEE
        INDIESFLKPTEE
Subjt:  INDIESFLKPTEE

A0A6J1DQ83 Tubulin-specific chaperone A4.5e-4585.84Show/hide
Query:  MATVKNLKIKTATCKRILKELFSYEKEVEREASKTADMKEKGADPYDLKQQENVLAESRMMVPDCHKRLEVALADLKEALAELEKSTEEKGPEFDDARST
        MATV+NLKIKTATCKRI+KEL SYEKEVEREA+KTADMKEKGADPYDLKQQENVLAESRMM+PDCHKRLE +LADLK ALAELE+ST+EKGPEFD+ARST
Subjt:  MATVKNLKIKTATCKRILKELFSYEKEVEREASKTADMKEKGADPYDLKQQENVLAESRMMVPDCHKRLEVALADLKEALAELEKSTEEKGPEFDDARST

Query:  INDIESFLKPTEE
        I+++E+FLK TEE
Subjt:  INDIESFLKPTEE

SwissProt top hitse value%identityAlignment
O04350 Tubulin-folding cofactor A4.2e-4074.34Show/hide
Query:  MATVKNLKIKTATCKRILKELFSYEKEVEREASKTADMKEKGADPYDLKQQENVLAESRMMVPDCHKRLEVALADLKEALAELEKSTEEKGPEFDDARST
        MAT++NLKIKT+TCKRI+KEL SYEKEVEREA+KTADMK+KGADPYDLKQQENVL ESRMM+PDCHKRLE ALADLK  LAELE++ E++GPE +DA+ T
Subjt:  MATVKNLKIKTATCKRILKELFSYEKEVEREASKTADMKEKGADPYDLKQQENVLAESRMMVPDCHKRLEVALADLKEALAELEKSTEEKGPEFDDARST

Query:  INDIESFLKPTEE
        + D+E    PTE+
Subjt:  INDIESFLKPTEE

O75347 Tubulin-specific chaperone A1.5e-1342.16Show/hide
Query:  VKNLKIKTATCKRILKELFSYEKEVEREASKTADMKEKGADPYDLKQQENVLAESRMMVPDCHKRLEVALADLKEALAELEKSTEEKGPEFDDARSTIND
        V+ +KIKT   KR++KE   YEKE +++  K   M+ +  + YD+K+Q  +L ESRMM+PDC +RLE A  DL+  L E EK  EE   E+ +AR  ++ 
Subjt:  VKNLKIKTATCKRILKELFSYEKEVEREASKTADMKEKGADPYDLKQQENVLAESRMMVPDCHKRLEVALADLKEALAELEKSTEEKGPEFDDARSTIND

Query:  IE
        ++
Subjt:  IE

P48428 Tubulin-specific chaperone A4.4e-1341.18Show/hide
Query:  VKNLKIKTATCKRILKELFSYEKEVEREASKTADMKEKGADPYDLKQQENVLAESRMMVPDCHKRLEVALADLKEALAELEKSTEEKGPEFDDARSTIND
        V+ +KIKT   +R++KE   YEKE +++  K   MK +  + Y +K+Q  +L ESRMM+PDC +RLE A  DL++ L E EK  EE   E+ +AR  ++ 
Subjt:  VKNLKIKTATCKRILKELFSYEKEVEREASKTADMKEKGADPYDLKQQENVLAESRMMVPDCHKRLEVALADLKEALAELEKSTEEKGPEFDDARSTIND

Query:  IE
        ++
Subjt:  IE

P80585 Tubulin-specific chaperone A2.3e-1444.12Show/hide
Query:  VKNLKIKTATCKRILKELFSYEKEVEREASKTADMKEKGADPYDLKQQENVLAESRMMVPDCHKRLEVALADLKEALAELEKSTEEKGPEFDDARSTIND
        ++ +KIKT   KR+ KE   YEKE +++  K   MK +  D Y +K+Q  +L ESRMM+PDC +RLE+A ADL + L E EK  EE   E+ +ARS +  
Subjt:  VKNLKIKTATCKRILKELFSYEKEVEREASKTADMKEKGADPYDLKQQENVLAESRMMVPDCHKRLEVALADLKEALAELEKSTEEKGPEFDDARSTIND

Query:  IE
        ++
Subjt:  IE

Q6PEC1 Tubulin-specific chaperone A1.5e-1342.16Show/hide
Query:  VKNLKIKTATCKRILKELFSYEKEVEREASKTADMKEKGADPYDLKQQENVLAESRMMVPDCHKRLEVALADLKEALAELEKSTEEKGPEFDDARSTIND
        V+ +KIKT   KR++KE   YEKE +++  K   MK +  + Y +K+Q  +L ESRMM+PDC +RLE A  DL++ L E EK  EE   E+ +AR  ++ 
Subjt:  VKNLKIKTATCKRILKELFSYEKEVEREASKTADMKEKGADPYDLKQQENVLAESRMMVPDCHKRLEVALADLKEALAELEKSTEEKGPEFDDARSTIND

Query:  IE
        ++
Subjt:  IE

Arabidopsis top hitse value%identityAlignment
AT2G30410.1 tubulin folding cofactor A (KIESEL)3.0e-4174.34Show/hide
Query:  MATVKNLKIKTATCKRILKELFSYEKEVEREASKTADMKEKGADPYDLKQQENVLAESRMMVPDCHKRLEVALADLKEALAELEKSTEEKGPEFDDARST
        MAT++NLKIKT+TCKRI+KEL SYEKEVEREA+KTADMK+KGADPYDLKQQENVL ESRMM+PDCHKRLE ALADLK  LAELE++ E++GPE +DA+ T
Subjt:  MATVKNLKIKTATCKRILKELFSYEKEVEREASKTADMKEKGADPYDLKQQENVLAESRMMVPDCHKRLEVALADLKEALAELEKSTEEKGPEFDDARST

Query:  INDIESFLKPTEE
        + D+E    PTE+
Subjt:  INDIESFLKPTEE

AT2G30410.2 tubulin folding cofactor A (KIESEL)3.0e-4174.34Show/hide
Query:  MATVKNLKIKTATCKRILKELFSYEKEVEREASKTADMKEKGADPYDLKQQENVLAESRMMVPDCHKRLEVALADLKEALAELEKSTEEKGPEFDDARST
        MAT++NLKIKT+TCKRI+KEL SYEKEVEREA+KTADMK+KGADPYDLKQQENVL ESRMM+PDCHKRLE ALADLK  LAELE++ E++GPE +DA+ T
Subjt:  MATVKNLKIKTATCKRILKELFSYEKEVEREASKTADMKEKGADPYDLKQQENVLAESRMMVPDCHKRLEVALADLKEALAELEKSTEEKGPEFDDARST

Query:  INDIESFLKPTEE
        + D+E    PTE+
Subjt:  INDIESFLKPTEE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTACTGTAAAGAACCTTAAGATTAAGACAGCGACCTGCAAACGCATTCTCAAGGAGTTGTTTTCTTATGAGAAGGAGGTGGAGAGAGAAGCTTCCAAAACAGCTGA
CATGAAAGAAAAAGGTGCTGACCCTTATGACCTTAAACAACAGGAAAATGTGCTGGCTGAATCAAGGATGATGGTTCCCGATTGTCACAAGCGTCTAGAGGTCGCCTTAG
CTGATCTGAAAGAAGCCCTGGCTGAACTGGAAAAATCAACAGAAGAGAAAGGTCCAGAGTTCGATGATGCTCGGAGTACAATCAACGATATTGAAAGTTTTCTAAAGCCA
ACAGAGGAATAA
mRNA sequenceShow/hide mRNA sequence
AGACATTTTTAAATCTCAAAGTACAAACAATCTACCAATTATTGTGGCAGCTCCTCAGTTGGCCCCAGGTCTTTTCATTTTCGACTTCTTCTTCTTCACTCGAAAAAACA
CCTCCCACGCTCTCTCTGCGCGCCGCTCAGCTTGCCGGACCTCCCTCTCACTCTAGCGGTCATCTCTCTCGCCGGACGTCGAGTCCCAGCTGTGCACGCCGTCGACTCTC
CGCGTAGGAACTCCCGCCCAGCCGCGCTTCTTCCGTCTATACCGTCACACCCAATCACTGGTTTTTCCGGTTCGTCTGCGGCTATTCTTCGCGCCGCCGGGACTTATCGT
CGCCATTCTTACCGGATCTTGGCTTTGGGAATTCGGATTAGAAGAATGTTAGTGGGCTGCTCACAAAGTTAAGACGAACTCTTGCAGTTTTCGGTAATTTTAGTCAGTAT
GGCTACTGTAAAGAACCTTAAGATTAAGACAGCGACCTGCAAACGCATTCTCAAGGAGTTGTTTTCTTATGAGAAGGAGGTGGAGAGAGAAGCTTCCAAAACAGCTGACA
TGAAAGAAAAAGGTGCTGACCCTTATGACCTTAAACAACAGGAAAATGTGCTGGCTGAATCAAGGATGATGGTTCCCGATTGTCACAAGCGTCTAGAGGTCGCCTTAGCT
GATCTGAAAGAAGCCCTGGCTGAACTGGAAAAATCAACAGAAGAGAAAGGTCCAGAGTTCGATGATGCTCGGAGTACAATCAACGATATTGAAAGTTTTCTAAAGCCAAC
AGAGGAATAATTGTGAGTTTGTCACCGCCTGATTGTTTTCAGAAGTTATAATTCAAACTATTGCTTTACTGTATTAGTTCTCAAATGTTTGGTTTTTGGATGTTATGATT
ATACTTTGGAAAGAGTTTCTTCTGCTGTTCTTCATTACTATCACCAAAGTGTAAGACTAAACTCTTCTCCTGGATGTTGTGTTTTAAAATATTTTGATGGCGTTTGCCCA
AATTTAAAGGAATAGATTTCTAAATATATGCCAACAGCAATCGAATACATTTGCTTGTTGAATGAGTTCTACGTAAGCATTAATGATGATTAATACGAAGTTTGGTAACT
AAAGTAAATGTAATATTAATTATTAATCAGAAGTCAATG
Protein sequenceShow/hide protein sequence
MATVKNLKIKTATCKRILKELFSYEKEVEREASKTADMKEKGADPYDLKQQENVLAESRMMVPDCHKRLEVALADLKEALAELEKSTEEKGPEFDDARSTINDIESFLKP
TEE