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IVF0002853 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0002853
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionRetrotransposon protein
Genome locationchr02:18681804..18682235
RNA-Seq ExpressionIVF0002853
SyntenyIVF0002853
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0050190.1 retrotransposon protein [Cucumis melo var. makuwa]2.18e-4569.49Show/hide
Query:  EGLINKPFSYYDELAYVFGYDRVKGHFVETFADVGSNESVEYERFDMPDGNEE----YNQGIDMSQENVCASRPSRVFEGRIRSNRSKRKRGSQREGKLK
        +GL NKPF YYDELAYVFG DR+   FV+TF DVGSN+ VEY+RFDM DGNEE    Y+QGIDMSQE+V ASRPS   +GRIRS+ SKRKR SQ++G+++
Subjt:  EGLINKPFSYYDELAYVFGYDRVKGHFVETFADVGSNESVEYERFDMPDGNEE----YNQGIDMSQENVCASRPSRVFEGRIRSNRSKRKRGSQREGKLK

Query:  VIHMTLECTNDQLRTIVE
        VIHM +ECTNDQLRTI E
Subjt:  VIHMTLECTNDQLRTIVE

KAA0051922.1 retrotransposon protein [Cucumis melo var. makuwa]1.70e-4568.38Show/hide
Query:  GLINKPFSYYDELAYVFGYDRVKGHFVETFADVGSNESVEYERFDMPDGNEE----YNQGIDMSQENVCASRPSRVFEGRIRSNRSKRKRGSQREGKLKV
        GL+NKPF YY+ELAYVFG +RV G FVETF DVGSNE   Y+ FDMPDGNE+    YNQGIDMSQE+V ASRP    +GRI S+  K KRG+Q+EG+L+V
Subjt:  GLINKPFSYYDELAYVFGYDRVKGHFVETFADVGSNESVEYERFDMPDGNEE----YNQGIDMSQENVCASRPSRVFEGRIRSNRSKRKRGSQREGKLKV

Query:  IHMTLECTNDQLRTIVE
        IHM LECTND LRTI E
Subjt:  IHMTLECTNDQLRTIVE

KAA0058317.1 retrotransposon protein [Cucumis melo var. makuwa]1.07e-7898.35Show/hide
Query:  MLLAYEREGLINKPFSYYDELAYVFGYDRVKGHFVETFADVGSNESVEYERFDMPDGNEEYNQGIDMSQENVCASRPSRVFEGRIRSNRSKRKRGSQREG
        MLLAYEREGLINKPFSYYDELAYVFGYDRV GHFVETFADVGSNESVEYERFDMPDGNEEYNQGIDMSQENVCASRPSRV EGRIRSNRSKRKRGSQREG
Subjt:  MLLAYEREGLINKPFSYYDELAYVFGYDRVKGHFVETFADVGSNESVEYERFDMPDGNEEYNQGIDMSQENVCASRPSRVFEGRIRSNRSKRKRGSQREG

Query:  KLKVIHMTLECTNDQLRTIVE
        KLKVIHMTLECTNDQLRTIVE
Subjt:  KLKVIHMTLECTNDQLRTIVE

KAA0065782.1 retrotransposon protein [Cucumis melo var. makuwa]3.05e-4565.55Show/hide
Query:  REGLINKPFSYYDELAYVFGYDRVKGHFVETFADVGSNESVEYERFDMPDGNEE----YNQGIDMSQENVCASRPSRVFEGRIRSNRSKRKRGSQREGKL
        R+GL+NK F +YDEL YVFG DR +GHF ETF DVGSNE + YE FD+PDGN+E    YNQGI+MSQE+V AS+PSR FEGR+ S+ SKRKRGSQ+E +L
Subjt:  REGLINKPFSYYDELAYVFGYDRVKGHFVETFADVGSNESVEYERFDMPDGNEE----YNQGIDMSQENVCASRPSRVFEGRIRSNRSKRKRGSQREGKL

Query:  KVIHMTLECTNDQLRTIVE
        +VI+M  ECTNDQL+ + E
Subjt:  KVIHMTLECTNDQLRTIVE

TYK09490.1 retrotransposon protein [Cucumis melo var. makuwa]1.59e-80100Show/hide
Query:  MLLAYEREGLINKPFSYYDELAYVFGYDRVKGHFVETFADVGSNESVEYERFDMPDGNEEYNQGIDMSQENVCASRPSRVFEGRIRSNRSKRKRGSQREG
        MLLAYEREGLINKPFSYYDELAYVFGYDRVKGHFVETFADVGSNESVEYERFDMPDGNEEYNQGIDMSQENVCASRPSRVFEGRIRSNRSKRKRGSQREG
Subjt:  MLLAYEREGLINKPFSYYDELAYVFGYDRVKGHFVETFADVGSNESVEYERFDMPDGNEEYNQGIDMSQENVCASRPSRVFEGRIRSNRSKRKRGSQREG

Query:  KLKVIHMTLECTNDQLRTIVE
        KLKVIHMTLECTNDQLRTIVE
Subjt:  KLKVIHMTLECTNDQLRTIVE

TrEMBL top hitse value%identityAlignment
A0A5A7U4I8 Retrotransposon protein2.0e-3569.49Show/hide
Query:  EGLINKPFSYYDELAYVFGYDRVKGHFVETFADVGSNESVEYERFDMPDGNEE----YNQGIDMSQENVCASRPSRVFEGRIRSNRSKRKRGSQREGKLK
        +GL NKPF YYDELAYVFG DR+   FV+TF DVGSN+ VEY+RFDM DGNEE    Y+QGIDMSQE+V ASRPS   +GRIRS+ SKRKR SQ++G+++
Subjt:  EGLINKPFSYYDELAYVFGYDRVKGHFVETFADVGSNESVEYERFDMPDGNEE----YNQGIDMSQENVCASRPSRVFEGRIRSNRSKRKRGSQREGKLK

Query:  VIHMTLECTNDQLRTIVE
        VIHM +ECTNDQLRTI E
Subjt:  VIHMTLECTNDQLRTIVE

A0A5A7UUA3 Retrotransposon protein9.0e-6098.35Show/hide
Query:  MLLAYEREGLINKPFSYYDELAYVFGYDRVKGHFVETFADVGSNESVEYERFDMPDGNEEYNQGIDMSQENVCASRPSRVFEGRIRSNRSKRKRGSQREG
        MLLAYEREGLINKPFSYYDELAYVFGYDRV GHFVETFADVGSNESVEYERFDMPDGNEEYNQGIDMSQENVCASRPSRV EGRIRSNRSKRKRGSQREG
Subjt:  MLLAYEREGLINKPFSYYDELAYVFGYDRVKGHFVETFADVGSNESVEYERFDMPDGNEEYNQGIDMSQENVCASRPSRVFEGRIRSNRSKRKRGSQREG

Query:  KLKVIHMTLECTNDQLRTIVE
        KLKVIHMTLECTNDQLRTIVE
Subjt:  KLKVIHMTLECTNDQLRTIVE

A0A5D3BD15 Retrotransposon protein2.0e-3565.55Show/hide
Query:  REGLINKPFSYYDELAYVFGYDRVKGHFVETFADVGSNESVEYERFDMPDGNEE----YNQGIDMSQENVCASRPSRVFEGRIRSNRSKRKRGSQREGKL
        R+GL+NK F +YDEL YVFG DR +GHF ETF DVGSNE + YE FD+PDGN+E    YNQGI+MSQE+V AS+PSR FEGR+ S+ SKRKRGSQ+E +L
Subjt:  REGLINKPFSYYDELAYVFGYDRVKGHFVETFADVGSNESVEYERFDMPDGNEE----YNQGIDMSQENVCASRPSRVFEGRIRSNRSKRKRGSQREGKL

Query:  KVIHMTLECTNDQLRTIVE
        +VI+M  ECTNDQL+ + E
Subjt:  KVIHMTLECTNDQLRTIVE

A0A5D3CDT3 Retrotransposon protein3.7e-61100Show/hide
Query:  MLLAYEREGLINKPFSYYDELAYVFGYDRVKGHFVETFADVGSNESVEYERFDMPDGNEEYNQGIDMSQENVCASRPSRVFEGRIRSNRSKRKRGSQREG
        MLLAYEREGLINKPFSYYDELAYVFGYDRVKGHFVETFADVGSNESVEYERFDMPDGNEEYNQGIDMSQENVCASRPSRVFEGRIRSNRSKRKRGSQREG
Subjt:  MLLAYEREGLINKPFSYYDELAYVFGYDRVKGHFVETFADVGSNESVEYERFDMPDGNEEYNQGIDMSQENVCASRPSRVFEGRIRSNRSKRKRGSQREG

Query:  KLKVIHMTLECTNDQLRTIVE
        KLKVIHMTLECTNDQLRTIVE
Subjt:  KLKVIHMTLECTNDQLRTIVE

A0A5D3CLE8 Retrotransposon protein7.7e-3568.38Show/hide
Query:  GLINKPFSYYDELAYVFGYDRVKGHFVETFADVGSNESVEYERFDMPDGNEE----YNQGIDMSQENVCASRPSRVFEGRIRSNRSKRKRGSQREGKLKV
        GL+NKPF YY+ELAYVFG +RV G FVETF DVGSNE   Y+ FDMPDGNE+    YNQGIDMSQE+V ASRP    +GRI S+  K KRG+Q+EG+L+V
Subjt:  GLINKPFSYYDELAYVFGYDRVKGHFVETFADVGSNESVEYERFDMPDGNEE----YNQGIDMSQENVCASRPSRVFEGRIRSNRSKRKRGSQREGKLKV

Query:  IHMTLECTNDQLRTIVE
        IHM LECTND LRTI E
Subjt:  IHMTLECTNDQLRTIVE

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCTACTTGCGTACGAAAGGGAAGGGCTCATTAACAAACCATTTTCCTATTACGATGAACTTGCATATGTGTTTGGATACGATAGGGTGAAGGGTCACTTCGTTGAGAC
ATTCGCCGACGTCGGGTCTAACGAGTCTGTCGAGTATGAGAGGTTTGACATGCCTGATGGGAATGAGGAATACAACCAGGGGATTGACATGTCCCAAGAGAATGTATGCG
CATCACGACCTTCTCGTGTGTTCGAGGGTAGGATCAGATCAAACAGATCGAAGAGGAAGAGGGGAAGCCAGCGAGAGGGCAAGCTTAAAGTTATACATATGACCCTCGAG
TGTACGAACGACCAACTCAGGACAATTGTAGAGTAG
mRNA sequenceShow/hide mRNA sequence
ATGCTACTTGCGTACGAAAGGGAAGGGCTCATTAACAAACCATTTTCCTATTACGATGAACTTGCATATGTGTTTGGATACGATAGGGTGAAGGGTCACTTCGTTGAGAC
ATTCGCCGACGTCGGGTCTAACGAGTCTGTCGAGTATGAGAGGTTTGACATGCCTGATGGGAATGAGGAATACAACCAGGGGATTGACATGTCCCAAGAGAATGTATGCG
CATCACGACCTTCTCGTGTGTTCGAGGGTAGGATCAGATCAAACAGATCGAAGAGGAAGAGGGGAAGCCAGCGAGAGGGCAAGCTTAAAGTTATACATATGACCCTCGAG
TGTACGAACGACCAACTCAGGACAATTGTAGAGTAG
Protein sequenceShow/hide protein sequence
MLLAYEREGLINKPFSYYDELAYVFGYDRVKGHFVETFADVGSNESVEYERFDMPDGNEEYNQGIDMSQENVCASRPSRVFEGRIRSNRSKRKRGSQREGKLKVIHMTLE
CTNDQLRTIVE