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IVF0002859 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0002859
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionPaired amphipathic helix protein Sin3-like 2-like
Genome locationchr09:20716897..20719103
RNA-Seq ExpressionIVF0002859
SyntenyIVF0002859
Gene Ontology termsGO:0006355 - regulation of transcription, DNA-templated (biological process)
GO:0003714 - transcription corepressor activity (molecular function)
GO:0016491 - oxidoreductase activity (molecular function)
GO:0043167 - ion binding (molecular function)
InterPro domainsIPR003822 - Paired amphipathic helix
IPR036600 - Paired amphipathic helix superfamily
IPR039774 - Transcriptional regulatory protein Sin3-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KDP45895.1 hypothetical protein JCGZ_15455 [Jatropha curcas]2.23e-1448Show/hide
Query:  GKS-QKATLADAISYVLRVKERFERNREKYERFLETVKDYGDRKIDFVELYATLANLFQDHPDLIWGLLRFLPSK
        GKS QK T+ D+++YV+ VKE F+  REKY+ FLE +KD+   +I+ + + A + NLF+ H DLI G   FLP K
Subjt:  GKS-QKATLADAISYVLRVKERFERNREKYERFLETVKDYGDRKIDFVELYATLANLFQDHPDLIWGLLRFLPSK
KDP45896.1 hypothetical protein JCGZ_15456 [Jatropha curcas]3.16e-1448Show/hide
Query:  GKS-QKATLADAISYVLRVKERFERNREKYERFLETVKDYGDRKIDFVELYATLANLFQDHPDLIWGLLRFLPSK
        GKS QK T+ D+++YV+ VKE F+  REKY+ FLE +KD+   +ID + + A +  LF+ H DLI G   FLP K
Subjt:  GKS-QKATLADAISYVLRVKERFERNREKYERFLETVKDYGDRKIDFVELYATLANLFQDHPDLIWGLLRFLPSK
KZV32932.1 paired amphipathic helix protein Sin3-like 2-like [Dorcoceras hygrometricum]1.79e-1244.74Show/hide
Query:  MASGKSQKATLADAISYVLRVKERFERNREKYERFLETVKDYGDRKIDFVELYATLANLFQDHPDLIWGLLRFLPS
        +ASG +QK T  DA++Y+  VK+ F+  REKY+RFL+ +KD+  ++ID   + A +  LF+ HP+LI G   FLP 
Subjt:  MASGKSQKATLADAISYVLRVKERFERNREKYERFLETVKDYGDRKIDFVELYATLANLFQDHPDLIWGLLRFLPS
XP_011098544.1 paired amphipathic helix protein Sin3-like 2 isoform X1 [Sesamum indicum]1.79e-1243.42Show/hide
Query:  MASGKSQKATLADAISYVLRVKERFERNREKYERFLETVKDYGDRKIDFVELYATLANLFQDHPDLIWGLLRFLPS
        +A+G +QK T  DA+SY+ +VK+ F+  REKY+RFL+ +KD+  +++D   + A +  LF+ HP+LI G   FLP 
Subjt:  MASGKSQKATLADAISYVLRVKERFERNREKYERFLETVKDYGDRKIDFVELYATLANLFQDHPDLIWGLLRFLPS
XP_011098545.1 paired amphipathic helix protein Sin3-like 2 isoform X2 [Sesamum indicum]1.79e-1243.42Show/hide
Query:  MASGKSQKATLADAISYVLRVKERFERNREKYERFLETVKDYGDRKIDFVELYATLANLFQDHPDLIWGLLRFLPS
        +A+G +QK T  DA+SY+ +VK+ F+  REKY+RFL+ +KD+  +++D   + A +  LF+ HP+LI G   FLP 
Subjt:  MASGKSQKATLADAISYVLRVKERFERNREKYERFLETVKDYGDRKIDFVELYATLANLFQDHPDLIWGLLRFLPS
TrEMBL top hitse value%identityAlignment
A0A067LBN9 Uncharacterized protein1.2e-0948Show/hide
Query:  GKS-QKATLADAISYVLRVKERFERNREKYERFLETVKDYGDRKIDFVELYATLANLFQDHPDLIWGLLRFLPSK
        GKS QK T+ D+++YV+ VKE F+  REKY+ FLE +KD+   +ID + + A +  LF+ H DLI G   FLP K
Subjt:  GKS-QKATLADAISYVLRVKERFERNREKYERFLETVKDYGDRKIDFVELYATLANLFQDHPDLIWGLLRFLPSK
A0A067LM75 Uncharacterized protein9.3e-1048Show/hide
Query:  GKS-QKATLADAISYVLRVKERFERNREKYERFLETVKDYGDRKIDFVELYATLANLFQDHPDLIWGLLRFLPSK
        GKS QK T+ D+++YV+ VKE F+  REKY+ FLE +KD+   +I+ + + A + NLF+ H DLI G   FLP K
Subjt:  GKS-QKATLADAISYVLRVKERFERNREKYERFLETVKDYGDRKIDFVELYATLANLFQDHPDLIWGLLRFLPSK
A0A2Z7BF10 Paired amphipathic helix protein Sin3-like 2-like2.1e-0945.33Show/hide
Query:  MASGKSQKATLADAISYVLRVKERFERNREKYERFLETVKDYGDRKIDFVELYATLANLFQDHPDLIWGLLRFLP
        +ASG +QK T  DA++Y+  VK+ F+  REKY+RFL+ +KD+  ++ID   + A +  LF+ HP+LI G   FLP
Subjt:  MASGKSQKATLADAISYVLRVKERFERNREKYERFLETVKDYGDRKIDFVELYATLANLFQDHPDLIWGLLRFLP
A0A6I9UIE8 paired amphipathic helix protein Sin3-like 2 isoform X12.1e-0944Show/hide
Query:  MASGKSQKATLADAISYVLRVKERFERNREKYERFLETVKDYGDRKIDFVELYATLANLFQDHPDLIWGLLRFLP
        +A+G +QK T  DA+SY+ +VK+ F+  REKY+RFL+ +KD+  +++D   + A +  LF+ HP+LI G   FLP
Subjt:  MASGKSQKATLADAISYVLRVKERFERNREKYERFLETVKDYGDRKIDFVELYATLANLFQDHPDLIWGLLRFLP
A0A6I9UUD7 paired amphipathic helix protein Sin3-like 2 isoform X22.1e-0944Show/hide
Query:  MASGKSQKATLADAISYVLRVKERFERNREKYERFLETVKDYGDRKIDFVELYATLANLFQDHPDLIWGLLRFLP
        +A+G +QK T  DA+SY+ +VK+ F+  REKY+RFL+ +KD+  +++D   + A +  LF+ HP+LI G   FLP
Subjt:  MASGKSQKATLADAISYVLRVKERFERNREKYERFLETVKDYGDRKIDFVELYATLANLFQDHPDLIWGLLRFLP
SwissProt top hitse value%identityAlignment
O04539 Paired amphipathic helix protein Sin3-like 41.1e-0738.16Show/hide
Query:  MASGKS-QKATLADAISYVLRVKERFERNREKYERFLETVKDYGDRKIDFVELYATLANLFQDHPDLIWGLLRFLP
        M  G S QK T  DA++Y+  VK++F+  R+KY+ FLE +KD+  +++D   +   +  LF+ + +LI G   FLP
Subjt:  MASGKS-QKATLADAISYVLRVKERFERNREKYERFLETVKDYGDRKIDFVELYATLANLFQDHPDLIWGLLRFLP
O48686 Paired amphipathic helix protein Sin3-like 31.7e-0836Show/hide
Query:  MASGKSQKATLADAISYVLRVKERFERNREKYERFLETVKDYGDRKIDFVELYATLANLFQDHPDLIWGLLRFLP
        +  G +QK T  DA++Y+  VK++F+  R KY+ FLE +K++  +++D   +   +  LF+ H +LI G   FLP
Subjt:  MASGKSQKATLADAISYVLRVKERFERNREKYERFLETVKDYGDRKIDFVELYATLANLFQDHPDLIWGLLRFLP
Q9LFQ3 Paired amphipathic helix protein Sin3-like 21.7e-0841.43Show/hide
Query:  SQKATLADAISYVLRVKERFERNREKYERFLETVKDYGDRKIDFVELYATLANLFQDHPDLIWGLLRFLP
        +QK T  DA++Y+  VKE F+  R+KY+ FLE +KD+  +K D   + + +  LF+ H +LI+G   FLP
Subjt:  SQKATLADAISYVLRVKERFERNREKYERFLETVKDYGDRKIDFVELYATLANLFQDHPDLIWGLLRFLP
Q9SRH9 Paired amphipathic helix protein Sin3-like 13.1e-1047.14Show/hide
Query:  SQKATLADAISYVLRVKERFERNREKYERFLETVKDYGDRKIDFVELYATLANLFQDHPDLIWGLLRFLP
        SQK T  DA+SY+  VKE F+  REKY+RFLE +KD+  ++ D   + A +  LF+ H +LI+G   FLP
Subjt:  SQKATLADAISYVLRVKERFERNREKYERFLETVKDYGDRKIDFVELYATLANLFQDHPDLIWGLLRFLP
Q9XIE1 Paired amphipathic helix protein Sin3-like 52.4e-0737.5Show/hide
Query:  GKSQKATLADAISYVLRVKERFERNREKYERFLETVKDYGDRKIDFVELYATLANLFQDHPDLIWGLLRFLP
        G +   T  DA++Y+  VK+ F+ N+EKYE FL  +KD+  +++D   + A + +LF+ + DL+ G   FLP
Subjt:  GKSQKATLADAISYVLRVKERFERNREKYERFLETVKDYGDRKIDFVELYATLANLFQDHPDLIWGLLRFLP
Arabidopsis top hitse value%identityAlignment
AT1G24190.1 SIN3-like 31.2e-0936Show/hide
Query:  MASGKSQKATLADAISYVLRVKERFERNREKYERFLETVKDYGDRKIDFVELYATLANLFQDHPDLIWGLLRFLP
        +  G +QK T  DA++Y+  VK++F+  R KY+ FLE +K++  +++D   +   +  LF+ H +LI G   FLP
Subjt:  MASGKSQKATLADAISYVLRVKERFERNREKYERFLETVKDYGDRKIDFVELYATLANLFQDHPDLIWGLLRFLP
AT1G24190.2 SIN3-like 31.2e-0936Show/hide
Query:  MASGKSQKATLADAISYVLRVKERFERNREKYERFLETVKDYGDRKIDFVELYATLANLFQDHPDLIWGLLRFLP
        +  G +QK T  DA++Y+  VK++F+  R KY+ FLE +K++  +++D   +   +  LF+ H +LI G   FLP
Subjt:  MASGKSQKATLADAISYVLRVKERFERNREKYERFLETVKDYGDRKIDFVELYATLANLFQDHPDLIWGLLRFLP
AT3G01320.1 SIN3-like 12.2e-1147.14Show/hide
Query:  SQKATLADAISYVLRVKERFERNREKYERFLETVKDYGDRKIDFVELYATLANLFQDHPDLIWGLLRFLP
        SQK T  DA+SY+  VKE F+  REKY+RFLE +KD+  ++ D   + A +  LF+ H +LI+G   FLP
Subjt:  SQKATLADAISYVLRVKERFERNREKYERFLETVKDYGDRKIDFVELYATLANLFQDHPDLIWGLLRFLP
AT3G01320.2 SIN3-like 12.2e-1147.14Show/hide
Query:  SQKATLADAISYVLRVKERFERNREKYERFLETVKDYGDRKIDFVELYATLANLFQDHPDLIWGLLRFLP
        SQK T  DA+SY+  VKE F+  REKY+RFLE +KD+  ++ D   + A +  LF+ H +LI+G   FLP
Subjt:  SQKATLADAISYVLRVKERFERNREKYERFLETVKDYGDRKIDFVELYATLANLFQDHPDLIWGLLRFLP
AT5G15020.1 SIN3-like 21.2e-0941.43Show/hide
Query:  SQKATLADAISYVLRVKERFERNREKYERFLETVKDYGDRKIDFVELYATLANLFQDHPDLIWGLLRFLP
        +QK T  DA++Y+  VKE F+  R+KY+ FLE +KD+  +K D   + + +  LF+ H +LI+G   FLP
Subjt:  SQKATLADAISYVLRVKERFERNREKYERFLETVKDYGDRKIDFVELYATLANLFQDHPDLIWGLLRFLP

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGAGCGGAAAATCCCAAAAGGCAACCTTGGCGGACGCCATATCATATGTTTTGAGAGTGAAGGAAAGATTTGAAAGAAACAGAGAAAAGTATGAACGTTTCCTTGA
AACTGTCAAAGATTACGGGGACCGAAAAATTGATTTTGTGGAACTCTATGCAACACTAGCGAACTTGTTTCAAGACCACCCAGATCTTATTTGGGGCTTACTTAGGTTCT
TGCCCAGCAAGTAA
mRNA sequenceShow/hide mRNA sequence
CTTTCAATGGCGAGCGGAAAATCCCAAAAGGCAACCTTGGCGGACGCCATATCATATGTTTTGAGAGTGAAGGAAAGATTTGAAAGAAACAGAGAAAAGTATGAACGTTT
CCTTGAAACTGTCAAAGATTACGGGGACCGAAAAATTGATTTTGTGGAACTCTATGCAACACTAGCGAACTTGTTTCAAGACCACCCAGATCTTATTTGGGGCTTACTTA
GGTTCTTGCCCAGCAAGTAATCACTCACCGTGAGATCATTCTTGAACTTGGACCCCAATGTTGTAATTTTAGGGACGAAGGGAAAATTATTATTGTAATATTTTAATCTC
TCAACAACCAATATTGTGCGATCTTCTATCTTCTTTCTGCAAAATTCCTTTTTCGCTCTGCAACGACTTATGGCGTTTTCCACACTGCCCATCTTCTTCTTCTTCGTTTT
CGTCTTCATAATTATCCCAATTTCTTATTCCTTACCCTTCACTGTACTCCACGTCTCGAATGTTTGCAACAAGGTGTTATAGATGTCCAGCTGGTTTTTGCCTCAATGGG
ATTCCGACATCTATGTTGATCATCTAGTTCATTATTATGACTACAGGTGAAGAAAACGAAGGTTTTAACTTCAATTTTGTTGGTCTCTCCCAGGTGATTCGTGAGGACTT
GAGGACTTTAGTTTAACACAAGACTTTGTTTCGTTTGACGATGCCGTTCTGGTCCAAAGGAAACGTCCTGGTCCGAATATTACCTGGATGAATAGTTTGAACCTGTTTAC
CCCCACAACAGAACGAGGCTTACCATTGAGGATTGGATTGGATTGAGAAGCTTAGATGAAGATGGAAGAGTGAAATTTATAGAAGTTGCAGGAGG
Protein sequenceShow/hide protein sequence
MASGKSQKATLADAISYVLRVKERFERNREKYERFLETVKDYGDRKIDFVELYATLANLFQDHPDLIWGLLRFLPSK