CuGenDBv2

Gene ID	IVF0002866
Organism	Cucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Description	Ycf20-like protein
Genome location	chr09:19808701..19809170
RNA-Seq Expression	IVF0002866
Synteny	IVF0002866
Gene Ontology terms	GO:0016021 - integral component of membrane (cellular component)
InterPro domains	IPR007572 - Uncharacterised protein family Ycf20

Homology

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GenBank top hits

e value

%identity

Alignment

KAG6579671.1 hypothetical protein SDJN03_24119, partial [Cucurbita argyrosperma subsp. sororia]

8.80e-77

80.13

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Query:  MAQSTSLVHTSLLNYGFSLKMNPSYWRYDMVKSRPSPPRSFRVKAVQDTGGPRRLVDIIRLGP---------------FGGISLLGGFYVAQTISLSFGA
        MAQS SLV T LLNY F+ + N SYWRYDM+KSRPSP RS  +KAVQDTGGPRRLVDIIRL P               FGGISLLGGFYVAQTISLSFGA
Subjt:  MAQSTSLVHTSLLNYGFSLKMNPSYWRYDMVKSRPSPPRSFRVKAVQDTGGPRRLVDIIRLGP---------------FGGISLLGGFYVAQTISLSFGA

Query:  LGVNDVIAAVVCVLLTEYVTRFYYSRPKVTFPIALLNNFKMGFTYGLFIDAFKLAS
        LGVNDVIAAVVCVLLTEYVTRFYYSRPKVTFP+ALLNNFKMGFTYGLFIDAFKLAS
Subjt:  LGVNDVIAAVVCVLLTEYVTRFYYSRPKVTFPIALLNNFKMGFTYGLFIDAFKLAS

XP_004143642.1 uncharacterized protein ycf20 [Cucumis sativus]

6.79e-88

87.82

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Query:  MAQSTSLVHTSLLNYGFSLKMNPSYWRYDMVKSRPSPPRSFRVKAVQDTGGPRRLVDIIRLGP---------------FGGISLLGGFYVAQTISLSFGA
        MAQS SLVHTSLLNYGF+ KMNPSYWRYDMVKSRPSPPRSFRVKAVQDTGGPRRLVDIIRL P               FGGISLLGGFYVAQTISLSFGA
Subjt:  MAQSTSLVHTSLLNYGFSLKMNPSYWRYDMVKSRPSPPRSFRVKAVQDTGGPRRLVDIIRLGP---------------FGGISLLGGFYVAQTISLSFGA

Query:  LGVNDVIAAVVCVLLTEYVTRFYYSRPKVTFPIALLNNFKMGFTYGLFIDAFKLAS
        LGVNDVIAAVVCVLLTEYVTRFYYSRPKVTFPIALLNNFKMGFTYGLFIDAFKLAS
Subjt:  LGVNDVIAAVVCVLLTEYVTRFYYSRPKVTFPIALLNNFKMGFTYGLFIDAFKLAS

XP_008467245.1 PREDICTED: uncharacterized protein ycf20 isoform X1 [Cucumis melo]

2.37e-88

88.46

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Query:  MAQSTSLVHTSLLNYGFSLKMNPSYWRYDMVKSRPSPPRSFRVKAVQDTGGPRRLVDIIRLGP---------------FGGISLLGGFYVAQTISLSFGA
        MAQSTSLVHT LLNYGFSLKMN SYWRYDMVKSRPSPPRSFRVKAVQDTGGPRRLVDIIRL P               FGGISLLGGFYVAQTISLSFGA
Subjt:  MAQSTSLVHTSLLNYGFSLKMNPSYWRYDMVKSRPSPPRSFRVKAVQDTGGPRRLVDIIRLGP---------------FGGISLLGGFYVAQTISLSFGA

Query:  LGVNDVIAAVVCVLLTEYVTRFYYSRPKVTFPIALLNNFKMGFTYGLFIDAFKLAS
        LGVNDVIAAVVCVLLTEYVTRFYYSRPKVTFPIALLNNFKMGFTYGLFIDAFKLAS
Subjt:  LGVNDVIAAVVCVLLTEYVTRFYYSRPKVTFPIALLNNFKMGFTYGLFIDAFKLAS

XP_022969949.1 uncharacterized protein ycf20 [Cucurbita maxima]

2.52e-76

79.49

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Query:  MAQSTSLVHTSLLNYGFSLKMNPSYWRYDMVKSRPSPPRSFRVKAVQDTGGPRRLVDIIRLGP---------------FGGISLLGGFYVAQTISLSFGA
        MAQS SLV T LLNY F+ + N SYWRYD++KSRPSP RS  +KAVQDTGGPRRLVDIIRL P               FGGISLLGGFYVAQTISLSFGA
Subjt:  MAQSTSLVHTSLLNYGFSLKMNPSYWRYDMVKSRPSPPRSFRVKAVQDTGGPRRLVDIIRLGP---------------FGGISLLGGFYVAQTISLSFGA

Query:  LGVNDVIAAVVCVLLTEYVTRFYYSRPKVTFPIALLNNFKMGFTYGLFIDAFKLAS
        LGVNDVIAAVVCVLLTEYVTRFYYSRPKVTFP+ALLNNFKMGFTYGLFIDAFKLAS
Subjt:  LGVNDVIAAVVCVLLTEYVTRFYYSRPKVTFPIALLNNFKMGFTYGLFIDAFKLAS

XP_038874767.1 uncharacterized protein ycf20 [Benincasa hispida]

1.89e-77

82.05

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Query:  MAQSTSLVHTSLLNYGFSLKMNPSYWRYDMVKSRPSPPRSFRVKAVQDTGGPRRLVDIIRLGP---------------FGGISLLGGFYVAQTISLSFGA
        MAQS SLVHTSLLNYGF+    P YWRYDM KSRPSP RS R+KAVQDT GPRRLVDIIRL P               FGGISLLGGFYVAQTISLSFGA
Subjt:  MAQSTSLVHTSLLNYGFSLKMNPSYWRYDMVKSRPSPPRSFRVKAVQDTGGPRRLVDIIRLGP---------------FGGISLLGGFYVAQTISLSFGA

Query:  LGVNDVIAAVVCVLLTEYVTRFYYSRPKVTFPIALLNNFKMGFTYGLFIDAFKLAS
        LGVNDVIAAVVCVLLTEYVTRFYYSRPKVTFPIALLNNFKMGFTYGLFIDAFKLAS
Subjt:  LGVNDVIAAVVCVLLTEYVTRFYYSRPKVTFPIALLNNFKMGFTYGLFIDAFKLAS

TrEMBL top hits

e value

%identity

Alignment

A0A0A0KPS1 Uncharacterized protein

1.5e-66

87.82

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Query:  MAQSTSLVHTSLLNYGFSLKMNPSYWRYDMVKSRPSPPRSFRVKAVQDTGGPRRLVDIIRLGP---------------FGGISLLGGFYVAQTISLSFGA
        MAQS SLVHTSLLNYGF+ KMNPSYWRYDMVKSRPSPPRSFRVKAVQDTGGPRRLVDIIRL P               FGGISLLGGFYVAQTISLSFGA
Subjt:  MAQSTSLVHTSLLNYGFSLKMNPSYWRYDMVKSRPSPPRSFRVKAVQDTGGPRRLVDIIRLGP---------------FGGISLLGGFYVAQTISLSFGA

Query:  LGVNDVIAAVVCVLLTEYVTRFYYSRPKVTFPIALLNNFKMGFTYGLFIDAFKLAS
        LGVNDVIAAVVCVLLTEYVTRFYYSRPKVTFPIALLNNFKMGFTYGLFIDAFKLAS
Subjt:  LGVNDVIAAVVCVLLTEYVTRFYYSRPKVTFPIALLNNFKMGFTYGLFIDAFKLAS

A0A1S3CT33 uncharacterized protein ycf20 isoform X1

6.8e-67

88.46

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Query:  MAQSTSLVHTSLLNYGFSLKMNPSYWRYDMVKSRPSPPRSFRVKAVQDTGGPRRLVDIIRLGP---------------FGGISLLGGFYVAQTISLSFGA
        MAQSTSLVHT LLNYGFSLKMN SYWRYDMVKSRPSPPRSFRVKAVQDTGGPRRLVDIIRL P               FGGISLLGGFYVAQTISLSFGA
Subjt:  MAQSTSLVHTSLLNYGFSLKMNPSYWRYDMVKSRPSPPRSFRVKAVQDTGGPRRLVDIIRLGP---------------FGGISLLGGFYVAQTISLSFGA

Query:  LGVNDVIAAVVCVLLTEYVTRFYYSRPKVTFPIALLNNFKMGFTYGLFIDAFKLAS
        LGVNDVIAAVVCVLLTEYVTRFYYSRPKVTFPIALLNNFKMGFTYGLFIDAFKLAS
Subjt:  LGVNDVIAAVVCVLLTEYVTRFYYSRPKVTFPIALLNNFKMGFTYGLFIDAFKLAS

A0A5D3BMH1 Ycf20-like protein isoform X1

4.9e-57

88.24

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Query:  MNPSYWRYDMVKSRPSPPRSFRVKAVQDTGGPRRLVDIIRLGP---------------FGGISLLGGFYVAQTISLSFGALGVNDVIAAVVCVLLTEYVT
        MNPSYWRYDMVKSRPSPPRSFRVKAVQDTGGPRRLVDIIRL P               FGGISLLGGFYVAQTISLSFGALGVNDVIAAVVCVLLTEYVT
Subjt:  MNPSYWRYDMVKSRPSPPRSFRVKAVQDTGGPRRLVDIIRLGP---------------FGGISLLGGFYVAQTISLSFGALGVNDVIAAVVCVLLTEYVT

Query:  RFYYSRPKVTFPIALLNNFKMGFTYGLFIDAFKLAS
        RFYYSRPKVTFPIALLNNFKMGFTYGLFIDAFKLAS
Subjt:  RFYYSRPKVTFPIALLNNFKMGFTYGLFIDAFKLAS

A0A6J1ESY7 uncharacterized protein ycf20

1.3e-57

79.49

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Query:  MAQSTSLVHTSLLNYGFSLKMNPSYWRYDMVKSRPSPPRSFRVKAVQDTGGPRRLVDIIRLGP---------------FGGISLLGGFYVAQTISLSFGA
        MAQS SLV T LLNY F+ + N SYWRYD++KSRPS PRS  +KAVQDTGGPRRLVDIIRL P               FGGISLLGGFYVAQTISLSFGA
Subjt:  MAQSTSLVHTSLLNYGFSLKMNPSYWRYDMVKSRPSPPRSFRVKAVQDTGGPRRLVDIIRLGP---------------FGGISLLGGFYVAQTISLSFGA

Query:  LGVNDVIAAVVCVLLTEYVTRFYYSRPKVTFPIALLNNFKMGFTYGLFIDAFKLAS
        LGVNDVIAAVVCVLLTEYVTRFYYSRPKVTFP+ALLNNFKMGFTYGLFIDAFKLAS
Subjt:  LGVNDVIAAVVCVLLTEYVTRFYYSRPKVTFPIALLNNFKMGFTYGLFIDAFKLAS

A0A6J1I440 uncharacterized protein ycf20

9.8e-58

79.49

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Query:  MAQSTSLVHTSLLNYGFSLKMNPSYWRYDMVKSRPSPPRSFRVKAVQDTGGPRRLVDIIRLGP---------------FGGISLLGGFYVAQTISLSFGA
        MAQS SLV T LLNY F+ + N SYWRYD++KSRPS PRS  +KAVQDTGGPRRLVDIIRL P               FGGISLLGGFYVAQTISLSFGA
Subjt:  MAQSTSLVHTSLLNYGFSLKMNPSYWRYDMVKSRPSPPRSFRVKAVQDTGGPRRLVDIIRLGP---------------FGGISLLGGFYVAQTISLSFGA

Query:  LGVNDVIAAVVCVLLTEYVTRFYYSRPKVTFPIALLNNFKMGFTYGLFIDAFKLAS
        LGVNDVIAAVVCVLLTEYVTRFYYSRPKVTFP+ALLNNFKMGFTYGLFIDAFKLAS
Subjt:  LGVNDVIAAVVCVLLTEYVTRFYYSRPKVTFPIALLNNFKMGFTYGLFIDAFKLAS

SwissProt top hits

e value

%identity

Alignment

P51214 Uncharacterized protein ycf20

5.3e-08

47.44

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Query:  GGISLLGGFYVAQTISLSFGALGVNDVIAAVVCVLLTEYVTRFYYS-RPKVTFPIALLNNFKMGFTYGLFIDAFKLAS
        G ISLL GF+++  +S   G  G   +IAA + V   E V++  YS + K    I LLNN K+G TYGLF+DAFKL S
Subjt:  GGISLLGGFYVAQTISLSFGALGVNDVIAAVVCVLLTEYVTRFYYS-RPKVTFPIALLNNFKMGFTYGLFIDAFKLAS

P72983 Ycf20-like protein

4.2e-05

37.66

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Query:  ISLLGGFYVAQTISLSFGALGVNDVIAAVVCVLLTEYVTRFYYSR--PKVTFPIALLNNFKMGFTYGLFIDAFKLAS
        +S L GF+V   ++ + G     DV+ A   +L  E V R++Y R          +LN FKMG +Y LF++AFKL S
Subjt:  ISLLGGFYVAQTISLSFGALGVNDVIAAVVCVLLTEYVTRFYYSR--PKVTFPIALLNNFKMGFTYGLFIDAFKLAS

Q1XDS2 Uncharacterized protein ycf20

1.1e-08

47.44

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Query:  GGISLLGGFYVAQTISLSFGALGVNDVIAAVVCVLLTEYVTRFYYSRPK-VTFPIALLNNFKMGFTYGLFIDAFKLAS
        G ISLL GF+++  +S   G  G   +IAA + V  TE  ++  YS  K +   I L NNFK+G TYGLF+DAFKL S
Subjt:  GGISLLGGFYVAQTISLSFGALGVNDVIAAVVCVLLTEYVTRFYYSRPK-VTFPIALLNNFKMGFTYGLFIDAFKLAS

Q9MUL5 Uncharacterized protein ycf20

2.1e-04

36.36

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Query:  PFGGISLLGGFYVAQTISLSFGALGVNDVIAAVVCVLLTEYVTRFYYSR----PKVTFPIALL-----NNFKMGFTYGLFIDAFKLAS
        P   + LL GF++A  ++  FG  G  DV+ A + V + E +    YS+     K  F I+ L     N  K+G  +GLF+DAFKL S
Subjt:  PFGGISLLGGFYVAQTISLSFGALGVNDVIAAVVCVLLTEYVTRFYYSR----PKVTFPIALL-----NNFKMGFTYGLFIDAFKLAS

Arabidopsis top hits

e value

%identity

Alignment

AT1G65420.1 Protein of unknown function (DUF565)

1.2e-04

Show/hide

Query:  LLGGFYVAQTISLSFGALGVNDVIAAVVCVLLTEYVTRFYYSRP-------KVTFPIALLNNFKMGFTYGLFIDAFKLAS
        LL GFY A  ++   G  G  DV+ A + V   E +    Y +P       K+   +  +N +K G   GLF+DAFKL S
Subjt:  LLGGFYVAQTISLSFGALGVNDVIAAVVCVLLTEYVTRFYYSRP-------KVTFPIALLNNFKMGFTYGLFIDAFKLAS

AT5G43050.1 Protein of unknown function (DUF565)

7.0e-40

61.88

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Query:  MAQSTSLVHTSLLNYGFSLKMNPSYWRYDMVKSRPSPPRSF--RVKAVQDTGG--PRRLVDIIRLGP---------------FGGISLLGGFYVAQTISL
        MA S S + T+L +   +     S+  +  V S     R F   ++A+Q+T G  PRRL+DIIR  P               FGGISLLGGFYVAQTISL
Subjt:  MAQSTSLVHTSLLNYGFSLKMNPSYWRYDMVKSRPSPPRSF--RVKAVQDTGG--PRRLVDIIRLGP---------------FGGISLLGGFYVAQTISL

Query:  SFGALGVNDVIAAVVCVLLTEYVTRFYYSRPKVTFPIALLNNFKMGFTYGLFIDAFKLAS
        SFGALGVNDVIAAV+CVLLTEYVTRFYYSR  VTFPIALLNNFKMGFTYGLFIDAFKLAS
Subjt:  SFGALGVNDVIAAVVCVLLTEYVTRFYYSRPKVTFPIALLNNFKMGFTYGLFIDAFKLAS

Sequences

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CDS sequence

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ATGGCACAATCTACAAGTTTAGTCCATACTAGCCTCTTAAATTATGGTTTTAGTCTCAAAATGAATCCTTCATATTGGAGATATGATATGGTTAAATCACGACCTTCCCC
TCCTCGTAGCTTTCGTGTCAAAGCTGTACAAGATACCGGGGGTCCTCGTAGGTTAGTTGATATCATTAGACTTGGCCCTTTTGGAGGAATCTCATTGTTGGGTGGCTTTT
ATGTGGCACAGACTATCTCATTGTCATTTGGAGCTTTAGGAGTAAATGATGTTATTGCTGCTGTGGTATGCGTTCTCCTTACCGAGTATGTTACTCGATTTTATTACAGT
CGACCAAAGGTAACTTTCCCCATTGCTCTACTGAACAACTTCAAAATGGGATTCACTTATGGTCTTTTCATTGACGCTTTCAAACTTGCTAGTTAA

mRNA sequence

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Protein sequence

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MAQSTSLVHTSLLNYGFSLKMNPSYWRYDMVKSRPSPPRSFRVKAVQDTGGPRRLVDIIRLGPFGGISLLGGFYVAQTISLSFGALGVNDVIAAVVCVLLTEYVTRFYYS
RPKVTFPIALLNNFKMGFTYGLFIDAFKLAS

IVF0002866 (gene) of Melon (IVF77) v1 genome