CuGenDBv2

Gene ID	IVF0002886
Organism	Cucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Description	Pre-mRNA cleavage factor Im 25 kDa subunit
Genome location	tig00000267:369955..374855
RNA-Seq Expression	IVF0002886
Synteny	IVF0002886
Gene Ontology terms	GO:0006364 - rRNA processing (biological process) GO:0006378 - mRNA polyadenylation (biological process) GO:0005829 - cytosol (cellular component) GO:0005849 - mRNA cleavage factor complex (cellular component) GO:0003729 - mRNA binding (molecular function)
InterPro domains	IPR015797 - NUDIX hydrolase-like domain superfamily IPR016706 - Cleavage/polyadenylation specificity factor subunit 5

Homology

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GenBank top hits

e value

%identity

Alignment

XP_004133873.1 pre-mRNA cleavage factor Im 25 kDa subunit 2 [Cucumis sativus]

3.83e-135

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Query:  MVTSPVVNTYPLSSYTFGTKEPKLEKDTSVADRLARMKVNYMKEGMRTSVEAILLVQEHKHPHILLLQIGNTFCKLPGGRLKPGENEIEGLKRKLTSKLG
        MVTSPVVNTYPLSSYTFGTKEPKLEKDTSVADRLARMKVNYMKEGMRTSVEAILLVQEHKHPHILLLQIGNTFCKLPGGRLKPGENEIEGLKRKLTSKLG
Subjt:  MVTSPVVNTYPLSSYTFGTKEPKLEKDTSVADRLARMKVNYMKEGMRTSVEAILLVQEHKHPHILLLQIGNTFCKLPGGRLKPGENEIEGLKRKLTSKLG

Query:  ANSPSLQPDWQV-QIISSIFIPNFETVMYPYCPPHITKPKECKKLFIVHLSEREYFAVPKNLKLLAVPLFELYDNVQRYGPVISTIPQQLSRFQFNMITT
        ANSPSLQPDWQ+ + ++  + PNFETVMYPYCPPHITKPKECKKLFIVHLSEREYFAVPKNLKLLAVPLFELYDNVQRYGPVISTIPQQLSRFQFNMITT
Subjt:  ANSPSLQPDWQV-QIISSIFIPNFETVMYPYCPPHITKPKECKKLFIVHLSEREYFAVPKNLKLLAVPLFELYDNVQRYGPVISTIPQQLSRFQFNMITT

XP_022147484.1 pre-mRNA cleavage factor Im 25 kDa subunit 2 [Momordica charantia]

1.10e-134

94.5

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Query:  MVTSPVVNTYPLSSYTFGTKEPKLEKDTSVADRLARMKVNYMKEGMRTSVEAILLVQEHKHPHILLLQIGNTFCKLPGGRLKPGENEIEGLKRKLTSKLG
        MVTSPVVNTYPLSSYTFGTKEPKLEKDTSVADRLARMKVNYMKEGMRTSVEAILLVQEHKHPHILLLQIGNTFCKLPGGRLKPGENEIEGLKRKLTSKLG
Subjt:  MVTSPVVNTYPLSSYTFGTKEPKLEKDTSVADRLARMKVNYMKEGMRTSVEAILLVQEHKHPHILLLQIGNTFCKLPGGRLKPGENEIEGLKRKLTSKLG

Query:  ANSPSLQPDWQV-QIISSIFIPNFETVMYPYCPPHITKPKECKKLFIVHLSEREYFAVPKNLKLLAVPLFELYDNVQRYGPVISTIPQQLSRFQFNMITT
        ANSP+LQPDWQ+ + ++  + PNFETVMYPYCPPHITKPKECKKLFIVHLSEREYFAVPKNLKLLAVPLFELYDNVQRYGPVISTIPQQLSRFQFNMITT
Subjt:  ANSPSLQPDWQV-QIISSIFIPNFETVMYPYCPPHITKPKECKKLFIVHLSEREYFAVPKNLKLLAVPLFELYDNVQRYGPVISTIPQQLSRFQFNMITT

XP_022924789.1 pre-mRNA cleavage factor Im 25 kDa subunit 2 [Cucurbita moschata]

3.68e-133

93.5

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Query:  MVTSPVVNTYPLSSYTFGTKEPKLEKDTSVADRLARMKVNYMKEGMRTSVEAILLVQEHKHPHILLLQIGNTFCKLPGGRLKPGENEIEGLKRKLTSKLG
        MVTSPVVNTYPLSSYTFGTKEPKLEKDTSVADRLARMKVNYMKEGMRTSVEAILLVQEH HPHILLLQIGNTFCKLPGGRLKPGENEIEGLKRKLTSKLG
Subjt:  MVTSPVVNTYPLSSYTFGTKEPKLEKDTSVADRLARMKVNYMKEGMRTSVEAILLVQEHKHPHILLLQIGNTFCKLPGGRLKPGENEIEGLKRKLTSKLG

Query:  ANSPSLQPDWQV-QIISSIFIPNFETVMYPYCPPHITKPKECKKLFIVHLSEREYFAVPKNLKLLAVPLFELYDNVQRYGPVISTIPQQLSRFQFNMITT
        ANSP+LQPDWQ+ + +++ + PNFETVMYPYCPPHITK KECKKLFIVHLSEREYFAVPKNLKLLAVPLFELYDNVQRYGPVISTIPQQLSRFQFNMITT
Subjt:  ANSPSLQPDWQV-QIISSIFIPNFETVMYPYCPPHITKPKECKKLFIVHLSEREYFAVPKNLKLLAVPLFELYDNVQRYGPVISTIPQQLSRFQFNMITT

XP_030501656.1 pre-mRNA cleavage factor Im 25 kDa subunit 2 [Cannabis sativa]

4.29e-132

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Query:  MVTSPVVNTYPLSSYTFGTKEPKLEKDTSVADRLARMKVNYMKEGMRTSVEAILLVQEHKHPHILLLQIGNTFCKLPGGRLKPGENEIEGLKRKLTSKLG
        MVTSPVVNTYPLSSYTFGTKEPK+EKDTSVADRLARMKVNYMKEGMRTSVEAILLVQEH HPHILLLQIGNTFCKLPGGRLKPGENEIEGLKRKLTSKLG
Subjt:  MVTSPVVNTYPLSSYTFGTKEPKLEKDTSVADRLARMKVNYMKEGMRTSVEAILLVQEHKHPHILLLQIGNTFCKLPGGRLKPGENEIEGLKRKLTSKLG

Query:  ANSPSLQPDWQV-QIISSIFIPNFETVMYPYCPPHITKPKECKKLFIVHLSEREYFAVPKNLKLLAVPLFELYDNVQRYGPVISTIPQQLSRFQFNMITT
        ANSP+L PDWQ+ + ++  + PNFET+MYPYCPPHITKPKECKKLF+VHLSEREYFAVPKNLKLLAVPLFELYDNVQRYGPVISTIPQQLSRFQFNMITT
Subjt:  ANSPSLQPDWQV-QIISSIFIPNFETVMYPYCPPHITKPKECKKLFIVHLSEREYFAVPKNLKLLAVPLFELYDNVQRYGPVISTIPQQLSRFQFNMITT

XP_031259563.1 pre-mRNA cleavage factor Im 25 kDa subunit 2 [Pistacia vera]

4.29e-132

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Query:  MVTSPVVNTYPLSSYTFGTKEPKLEKDTSVADRLARMKVNYMKEGMRTSVEAILLVQEHKHPHILLLQIGNTFCKLPGGRLKPGENEIEGLKRKLTSKLG
        MVTSPVVNTYPLSSYTFGTKEPK+EKDTSVADRLARMKVNYMKEGMRTSVEAILLVQEH HPHILLLQIGNTFCKLPGGRLKPGENEIEGLKRKLTSKLG
Subjt:  MVTSPVVNTYPLSSYTFGTKEPKLEKDTSVADRLARMKVNYMKEGMRTSVEAILLVQEHKHPHILLLQIGNTFCKLPGGRLKPGENEIEGLKRKLTSKLG

Query:  ANSPSLQPDWQV-QIISSIFIPNFETVMYPYCPPHITKPKECKKLFIVHLSEREYFAVPKNLKLLAVPLFELYDNVQRYGPVISTIPQQLSRFQFNMITT
        ANSP+L PDWQ+ + ++  + PNFET+MYPYCPPHITKPKECKKLF+VHLSEREYFAVPKNLKLLAVPLFELYDNVQRYGPVISTIPQQLSRFQFNMITT
Subjt:  ANSPSLQPDWQV-QIISSIFIPNFETVMYPYCPPHITKPKECKKLFIVHLSEREYFAVPKNLKLLAVPLFELYDNVQRYGPVISTIPQQLSRFQFNMITT

TrEMBL top hits

e value

%identity

Alignment

A0A0A0L8Y2 Pre-mRNA cleavage factor Im 25 kDa subunit

7.5e-104

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Query:  MVTSPVVNTYPLSSYTFGTKEPKLEKDTSVADRLARMKVNYMKEGMRTSVEAILLVQEHKHPHILLLQIGNTFCKLPGGRLKPGENEIEGLKRKLTSKLG
        MVTSPVVNTYPLSSYTFGTKEPKLEKDTSVADRLARMKVNYMKEGMRTSVEAILLVQEHKHPHILLLQIGNTFCKLPGGRLKPGENEIEGLKRKLTSKLG
Subjt:  MVTSPVVNTYPLSSYTFGTKEPKLEKDTSVADRLARMKVNYMKEGMRTSVEAILLVQEHKHPHILLLQIGNTFCKLPGGRLKPGENEIEGLKRKLTSKLG

Query:  ANSPSLQPDWQV-QIISSIFIPNFETVMYPYCPPHITKPKECKKLFIVHLSEREYFAVPKNLKLLAVPLFELYDNVQRYGPVISTIPQQLSRFQFNMITT
        ANSPSLQPDWQ+ + ++  + PNFETVMYPYCPPHITKPKECKKLFIVHLSEREYFAVPKNLKLLAVPLFELYDNVQRYGPVISTIPQQLSRFQFNMITT
Subjt:  ANSPSLQPDWQV-QIISSIFIPNFETVMYPYCPPHITKPKECKKLFIVHLSEREYFAVPKNLKLLAVPLFELYDNVQRYGPVISTIPQQLSRFQFNMITT

A0A1S3AW26 Pre-mRNA cleavage factor Im 25 kDa subunit

7.5e-104

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Query:  MVTSPVVNTYPLSSYTFGTKEPKLEKDTSVADRLARMKVNYMKEGMRTSVEAILLVQEHKHPHILLLQIGNTFCKLPGGRLKPGENEIEGLKRKLTSKLG
        MVTSPVVNTYPLSSYTFGTKEPKLEKDTSVADRLARMKVNYMKEGMRTSVEAILLVQEHKHPHILLLQIGNTFCKLPGGRLKPGENEIEGLKRKLTSKLG
Subjt:  MVTSPVVNTYPLSSYTFGTKEPKLEKDTSVADRLARMKVNYMKEGMRTSVEAILLVQEHKHPHILLLQIGNTFCKLPGGRLKPGENEIEGLKRKLTSKLG

Query:  ANSPSLQPDWQV-QIISSIFIPNFETVMYPYCPPHITKPKECKKLFIVHLSEREYFAVPKNLKLLAVPLFELYDNVQRYGPVISTIPQQLSRFQFNMITT
        ANSPSLQPDWQ+ + ++  + PNFETVMYPYCPPHITKPKECKKLFIVHLSEREYFAVPKNLKLLAVPLFELYDNVQRYGPVISTIPQQLSRFQFNMITT
Subjt:  ANSPSLQPDWQV-QIISSIFIPNFETVMYPYCPPHITKPKECKKLFIVHLSEREYFAVPKNLKLLAVPLFELYDNVQRYGPVISTIPQQLSRFQFNMITT

A0A5D3D0Y8 Pre-mRNA cleavage factor Im 25 kDa subunit

7.5e-104

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Query:  MVTSPVVNTYPLSSYTFGTKEPKLEKDTSVADRLARMKVNYMKEGMRTSVEAILLVQEHKHPHILLLQIGNTFCKLPGGRLKPGENEIEGLKRKLTSKLG
        MVTSPVVNTYPLSSYTFGTKEPKLEKDTSVADRLARMKVNYMKEGMRTSVEAILLVQEHKHPHILLLQIGNTFCKLPGGRLKPGENEIEGLKRKLTSKLG
Subjt:  MVTSPVVNTYPLSSYTFGTKEPKLEKDTSVADRLARMKVNYMKEGMRTSVEAILLVQEHKHPHILLLQIGNTFCKLPGGRLKPGENEIEGLKRKLTSKLG

Query:  ANSPSLQPDWQV-QIISSIFIPNFETVMYPYCPPHITKPKECKKLFIVHLSEREYFAVPKNLKLLAVPLFELYDNVQRYGPVISTIPQQLSRFQFNMITT
        ANSPSLQPDWQ+ + ++  + PNFETVMYPYCPPHITKPKECKKLFIVHLSEREYFAVPKNLKLLAVPLFELYDNVQRYGPVISTIPQQLSRFQFNMITT
Subjt:  ANSPSLQPDWQV-QIISSIFIPNFETVMYPYCPPHITKPKECKKLFIVHLSEREYFAVPKNLKLLAVPLFELYDNVQRYGPVISTIPQQLSRFQFNMITT

A0A6J1D153 Pre-mRNA cleavage factor Im 25 kDa subunit

1.7e-103

94.5

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Query:  MVTSPVVNTYPLSSYTFGTKEPKLEKDTSVADRLARMKVNYMKEGMRTSVEAILLVQEHKHPHILLLQIGNTFCKLPGGRLKPGENEIEGLKRKLTSKLG
        MVTSPVVNTYPLSSYTFGTKEPKLEKDTSVADRLARMKVNYMKEGMRTSVEAILLVQEHKHPHILLLQIGNTFCKLPGGRLKPGENEIEGLKRKLTSKLG
Subjt:  MVTSPVVNTYPLSSYTFGTKEPKLEKDTSVADRLARMKVNYMKEGMRTSVEAILLVQEHKHPHILLLQIGNTFCKLPGGRLKPGENEIEGLKRKLTSKLG

Query:  ANSPSLQPDWQV-QIISSIFIPNFETVMYPYCPPHITKPKECKKLFIVHLSEREYFAVPKNLKLLAVPLFELYDNVQRYGPVISTIPQQLSRFQFNMITT
        ANSP+LQPDWQ+ + ++  + PNFETVMYPYCPPHITKPKECKKLFIVHLSEREYFAVPKNLKLLAVPLFELYDNVQRYGPVISTIPQQLSRFQFNMITT
Subjt:  ANSPSLQPDWQV-QIISSIFIPNFETVMYPYCPPHITKPKECKKLFIVHLSEREYFAVPKNLKLLAVPLFELYDNVQRYGPVISTIPQQLSRFQFNMITT

A0A6J1IEE3 Pre-mRNA cleavage factor Im 25 kDa subunit

1.7e-103

94.5

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Query:  MVTSPVVNTYPLSSYTFGTKEPKLEKDTSVADRLARMKVNYMKEGMRTSVEAILLVQEHKHPHILLLQIGNTFCKLPGGRLKPGENEIEGLKRKLTSKLG
        MVTSPVVNTYPLSSYTFGTKEPKLEKDTSVADRLARMKVNYMKEGMRTSVEAILLVQEHKHPHILLLQIGNTFCKLPGGRLKPGENEIEGLKRKLTSKLG
Subjt:  MVTSPVVNTYPLSSYTFGTKEPKLEKDTSVADRLARMKVNYMKEGMRTSVEAILLVQEHKHPHILLLQIGNTFCKLPGGRLKPGENEIEGLKRKLTSKLG

Query:  ANSPSLQPDWQV-QIISSIFIPNFETVMYPYCPPHITKPKECKKLFIVHLSEREYFAVPKNLKLLAVPLFELYDNVQRYGPVISTIPQQLSRFQFNMITT
        ANSP+LQPDWQ+ + ++  + PNFETVMYPYCPPHITKPKECKKLFIVHLSEREYFAVPKNLKLLAVPLFELYDNVQRYGPVISTIPQQLSRFQFNMITT
Subjt:  ANSPSLQPDWQV-QIISSIFIPNFETVMYPYCPPHITKPKECKKLFIVHLSEREYFAVPKNLKLLAVPLFELYDNVQRYGPVISTIPQQLSRFQFNMITT

SwissProt top hits

e value

%identity

Alignment

O43809 Cleavage and polyadenylation specificity factor subunit 5

3.2e-59

60.32

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Query:  VNTYPLSSYTFGTKEPKLEKDTSVADRLARMKVNYMKEGMRTSVEAILLVQEHKHPHILLLQIGNTFCKLPGGRLKPGENEIEGLKRKLTSKLGANSPSL
        +N YPL++YTFGTKEP  EKD+SVA R  RM+  + K GMR +VE +L+V EH+ PH+LLLQ+G TF KLPGG L PGE+E+EGLKR +T  LG     L
Subjt:  VNTYPLSSYTFGTKEPKLEKDTSVADRLARMKVNYMKEGMRTSVEAILLVQEHKHPHILLLQIGNTFCKLPGGRLKPGENEIEGLKRKLTSKLGANSPSL

Query:  QPDWQV-QIISSIFIPNFETVMYPYCPPHITKPKECKKLFIVHLSEREYFAVPKNLKLLAVPLFELYDNVQRYGPVISTIPQQLSRFQF
        Q DW +   I + + PNFE   YPY P HITKPKE KKLF+V L E+  FAVPKN KL+A PLFELYDN   YGP+IS++PQ LSRF F
Subjt:  QPDWQV-QIISSIFIPNFETVMYPYCPPHITKPKECKKLFIVHLSEREYFAVPKNLKLLAVPLFELYDNVQRYGPVISTIPQQLSRFQF

Q3ZCA2 Cleavage and polyadenylation specificity factor subunit 5

3.2e-59

60.32

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Query:  VNTYPLSSYTFGTKEPKLEKDTSVADRLARMKVNYMKEGMRTSVEAILLVQEHKHPHILLLQIGNTFCKLPGGRLKPGENEIEGLKRKLTSKLGANSPSL
        +N YPL++YTFGTKEP  EKD+SVA R  RM+  + K GMR +VE +L+V EH+ PH+LLLQ+G TF KLPGG L PGE+E+EGLKR +T  LG     L
Subjt:  VNTYPLSSYTFGTKEPKLEKDTSVADRLARMKVNYMKEGMRTSVEAILLVQEHKHPHILLLQIGNTFCKLPGGRLKPGENEIEGLKRKLTSKLGANSPSL

Query:  QPDWQV-QIISSIFIPNFETVMYPYCPPHITKPKECKKLFIVHLSEREYFAVPKNLKLLAVPLFELYDNVQRYGPVISTIPQQLSRFQF
        Q DW +   I + + PNFE   YPY P HITKPKE KKLF+V L E+  FAVPKN KL+A PLFELYDN   YGP+IS++PQ LSRF F
Subjt:  QPDWQV-QIISSIFIPNFETVMYPYCPPHITKPKECKKLFIVHLSEREYFAVPKNLKLLAVPLFELYDNVQRYGPVISTIPQQLSRFQF

Q5RAI8 Cleavage and polyadenylation specificity factor subunit 5

3.2e-59

60.32

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Query:  VNTYPLSSYTFGTKEPKLEKDTSVADRLARMKVNYMKEGMRTSVEAILLVQEHKHPHILLLQIGNTFCKLPGGRLKPGENEIEGLKRKLTSKLGANSPSL
        +N YPL++YTFGTKEP  EKD+SVA R  RM+  + K GMR +VE +L+V EH+ PH+LLLQ+G TF KLPGG L PGE+E+EGLKR +T  LG     L
Subjt:  VNTYPLSSYTFGTKEPKLEKDTSVADRLARMKVNYMKEGMRTSVEAILLVQEHKHPHILLLQIGNTFCKLPGGRLKPGENEIEGLKRKLTSKLGANSPSL

Query:  QPDWQV-QIISSIFIPNFETVMYPYCPPHITKPKECKKLFIVHLSEREYFAVPKNLKLLAVPLFELYDNVQRYGPVISTIPQQLSRFQF
        Q DW +   I + + PNFE   YPY P HITKPKE KKLF+V L E+  FAVPKN KL+A PLFELYDN   YGP+IS++PQ LSRF F
Subjt:  QPDWQV-QIISSIFIPNFETVMYPYCPPHITKPKECKKLFIVHLSEREYFAVPKNLKLLAVPLFELYDNVQRYGPVISTIPQQLSRFQF

Q8GXS3 Pre-mRNA cleavage factor Im 25 kDa subunit 2

9.5e-96

84.5

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Query:  MVTSPVVNTYPLSSYTFGTKEPKLEKDTSVADRLARMKVNYMKEGMRTSVEAILLVQEHKHPHILLLQIGNTFCKLPGGRLKPGENEIEGLKRKLTSKLG
        M  S VVNTYPLS+Y+FGTKEPKLEKDTSVADRLARMK+NYMKEGMRTSVE ILLVQEH HPHILLLQIGNTFCKLPGGRLKPGENE +GLKRKLTSKLG
Subjt:  MVTSPVVNTYPLSSYTFGTKEPKLEKDTSVADRLARMKVNYMKEGMRTSVEAILLVQEHKHPHILLLQIGNTFCKLPGGRLKPGENEIEGLKRKLTSKLG

Query:  ANSPSLQPDWQV-QIISSIFIPNFETVMYPYCPPHITKPKECKKLFIVHLSEREYFAVPKNLKLLAVPLFELYDNVQRYGPVISTIPQQLSRFQFNMITT
         NS +L PDW V + +++ + PNFET+MYPYCPPHITKPKECK+L+IVHLSE+EYFAVPKNLKLLAVPLFELYDNVQRYGPVISTIPQQLSRF FNMI++
Subjt:  ANSPSLQPDWQV-QIISSIFIPNFETVMYPYCPPHITKPKECKKLFIVHLSEREYFAVPKNLKLLAVPLFELYDNVQRYGPVISTIPQQLSRFQFNMITT

Q9CQF3 Cleavage and polyadenylation specificity factor subunit 5

3.2e-59

60.32

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Query:  VNTYPLSSYTFGTKEPKLEKDTSVADRLARMKVNYMKEGMRTSVEAILLVQEHKHPHILLLQIGNTFCKLPGGRLKPGENEIEGLKRKLTSKLGANSPSL
        +N YPL++YTFGTKEP  EKD+SVA R  RM+  + K GMR +VE +L+V EH+ PH+LLLQ+G TF KLPGG L PGE+E+EGLKR +T  LG     L
Subjt:  VNTYPLSSYTFGTKEPKLEKDTSVADRLARMKVNYMKEGMRTSVEAILLVQEHKHPHILLLQIGNTFCKLPGGRLKPGENEIEGLKRKLTSKLGANSPSL

Query:  QPDWQV-QIISSIFIPNFETVMYPYCPPHITKPKECKKLFIVHLSEREYFAVPKNLKLLAVPLFELYDNVQRYGPVISTIPQQLSRFQF
        Q DW +   I + + PNFE   YPY P HITKPKE KKLF+V L E+  FAVPKN KL+A PLFELYDN   YGP+IS++PQ LSRF F
Subjt:  QPDWQV-QIISSIFIPNFETVMYPYCPPHITKPKECKKLFIVHLSEREYFAVPKNLKLLAVPLFELYDNVQRYGPVISTIPQQLSRFQF

Arabidopsis top hits

e value

%identity

Alignment

AT4G25550.1 Cleavage/polyadenylation specificity factor, 25kDa subunit

6.7e-97

84.5

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Query:  MVTSPVVNTYPLSSYTFGTKEPKLEKDTSVADRLARMKVNYMKEGMRTSVEAILLVQEHKHPHILLLQIGNTFCKLPGGRLKPGENEIEGLKRKLTSKLG
        M  S VVNTYPLS+Y+FGTKEPKLEKDTSVADRLARMK+NYMKEGMRTSVE ILLVQEH HPHILLLQIGNTFCKLPGGRLKPGENE +GLKRKLTSKLG
Subjt:  MVTSPVVNTYPLSSYTFGTKEPKLEKDTSVADRLARMKVNYMKEGMRTSVEAILLVQEHKHPHILLLQIGNTFCKLPGGRLKPGENEIEGLKRKLTSKLG

Query:  ANSPSLQPDWQV-QIISSIFIPNFETVMYPYCPPHITKPKECKKLFIVHLSEREYFAVPKNLKLLAVPLFELYDNVQRYGPVISTIPQQLSRFQFNMITT
         NS +L PDW V + +++ + PNFET+MYPYCPPHITKPKECK+L+IVHLSE+EYFAVPKNLKLLAVPLFELYDNVQRYGPVISTIPQQLSRF FNMI++
Subjt:  ANSPSLQPDWQV-QIISSIFIPNFETVMYPYCPPHITKPKECKKLFIVHLSEREYFAVPKNLKLLAVPLFELYDNVQRYGPVISTIPQQLSRFQFNMITT

AT4G29820.1 homolog of CFIM-25

2.6e-56

55.44

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Query:  VVNTYPLSSYTFGTKEPKLEKDTSVADRLARMKVNYMKEGMRTSVEAILLVQEHKHPHILLLQIGNTFCKLPGGRLKPGENEIEGLKRKLTSKLGANSPS
        +V+ YPLSSY FG+KE    KD  ++DR+ R+K NY   G+RT VEA+LLV+  KHPH+LLLQ  N+  KLPGGRL+PGE++IEGLKRKL SKL  N   
Subjt:  VVNTYPLSSYTFGTKEPKLEKDTSVADRLARMKVNYMKEGMRTSVEAILLVQEHKHPHILLLQIGNTFCKLPGGRLKPGENEIEGLKRKLTSKLGANSPS

Query:  LQPDWQV-QIISSIFIPNFETVMYPYCPPHITKPKECKKLFIVHLSEREYFAVPKNLKLLAVPLFELYDNVQRYGPVISTIPQQLSRFQFNMI
            ++V + I   + PNFET+MYP+ PP+I  PKEC KLF+V L   + F VPKN KLLAVPL +L++N + YGP++S IP+ LS+F FNM+
Subjt:  LQPDWQV-QIISSIFIPNFETVMYPYCPPHITKPKECKKLFIVHLSEREYFAVPKNLKLLAVPLFELYDNVQRYGPVISTIPQQLSRFQFNMI

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGGTGACGTCGCCGGTGGTGAACACGTATCCACTTTCCAGCTATACCTTCGGTACCAAAGAGCCGAAGCTCGAGAAGGACACCTCTGTCGCTGATCGTCTTGCTCGCAT
GAAAGTCAACTATATGAAGGAAGGCATGAGAACAAGTGTTGAAGCAATTCTGCTGGTGCAAGAACATAAACATCCCCACATTCTACTATTGCAAATAGGCAATACCTTTT
GCAAGCTCCCTGGAGGACGGTTGAAGCCAGGAGAAAATGAAATTGAAGGTTTAAAGAGGAAGCTCACAAGCAAACTGGGTGCAAACTCGCCCTCACTCCAGCCTGATTGG
CAGGTTCAAATCATTTCTTCTATTTTTATACCAAACTTTGAAACTGTCATGTATCCTTATTGCCCCCCTCATATTACGAAACCCAAGGAATGCAAAAAACTTTTCATTGT
TCACTTGTCTGAAAGAGAGTACTTCGCCGTTCCCAAAAATTTGAAGCTGCTTGCAGTTCCCTTGTTTGAGCTCTATGACAATGTGCAGAGATATGGACCAGTTATCTCGA
CGATACCGCAGCAGCTTTCCAGGTTTCAGTTCAACATGATCACCACATGA

mRNA sequence

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Protein sequence

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MVTSPVVNTYPLSSYTFGTKEPKLEKDTSVADRLARMKVNYMKEGMRTSVEAILLVQEHKHPHILLLQIGNTFCKLPGGRLKPGENEIEGLKRKLTSKLGANSPSLQPDW
QVQIISSIFIPNFETVMYPYCPPHITKPKECKKLFIVHLSEREYFAVPKNLKLLAVPLFELYDNVQRYGPVISTIPQQLSRFQFNMITT

IVF0002886 (gene) of Melon (IVF77) v1 genome