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IVF0002920 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0002920
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Descriptionprotein LAX PANICLE 2-like
Genome locationchr11:8791449..8791976
RNA-Seq ExpressionIVF0002920
SyntenyIVF0002920
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8652308.1 hypothetical protein Csa_022227 [Cucumis sativus]1.25e-5888.7Show/hide
Query:  MGSSSTQEWLELSLGLRSTEKEHQQKEEKEDEKRSRLYQEKLVVCGTTSHEESEYVNLDLRLQIGPNNKRNHYNMGIRDFMLQHQSNKKHFRSDYSST-T
        MGSSSTQEWLELSLGL ST KE  QK+EKEDEKRSRLYQEKLV+CGTTSHEESEYVNLDLRLQIGPNNK N+ NMGIRDFMLQHQS KKHF SDYSS  T
Subjt:  MGSSSTQEWLELSLGLRSTEKEHQQKEEKEDEKRSRLYQEKLVVCGTTSHEESEYVNLDLRLQIGPNNKRNHYNMGIRDFMLQHQSNKKHFRSDYSST-T

Query:  NSAGLWFSLLSSPNR
        NSAGLWFSLLSSPNR
Subjt:  NSAGLWFSLLSSPNR
KAG6571319.1 Protein LAX PANICLE 2, partial [Cucurbita argyrosperma subsp. sororia]5.81e-1142.52Show/hide
Query:  MGSSSTQEWLELSLGLRSTEKEHQQKEEKEDEKRSRLYQEKLVVCGTTSHEESEYVNLDLRLQIGPNNKRNHYNMGIRDFMLQHQSNKKHFRSDYSSTT-
        MGS  ++EWLELSLGLR T+K+ ++ +++EDE                  EE E  +L LRLQIGP  K    NMGI  FM    + K  F S +S T  
Subjt:  MGSSSTQEWLELSLGLRSTEKEHQQKEEKEDEKRSRLYQEKLVVCGTTSHEESEYVNLDLRLQIGPNNKRNHYNMGIRDFMLQHQSNKKHFRSDYSSTT-

Query:  ------------NSAGLWFSLLSSPNR
                    N AGLWFSL SSPNR
Subjt:  ------------NSAGLWFSLLSSPNR
XP_022931988.1 protein LAX PANICLE 2-like [Cucurbita moschata]1.13e-1042.52Show/hide
Query:  MGSSSTQEWLELSLGLRSTEKEHQQKEEKEDEKRSRLYQEKLVVCGTTSHEESEYVNLDLRLQIGPNNKRNHYNMGIRDFMLQHQSNKKHFRSDYSSTT-
        MGS  ++EWLELSLGLR T+K+ ++ +++EDE                  EE E  +L LRLQIGP  K    NMGI  FM    + K  F S +S T  
Subjt:  MGSSSTQEWLELSLGLRSTEKEHQQKEEKEDEKRSRLYQEKLVVCGTTSHEESEYVNLDLRLQIGPNNKRNHYNMGIRDFMLQHQSNKKHFRSDYSSTT-

Query:  ------------NSAGLWFSLLSSPNR
                    N AGLWFSL SSPNR
Subjt:  ------------NSAGLWFSLLSSPNR
TrEMBL top hitse value%identityAlignment
A0A0A0LR47 Uncharacterized protein2.2e-4688.14Show/hide
Query:  MGSSSTQEWLELSLGLRSTEKEHQQKEEKEDEKRSRLYQEKLVVCGTTSHEESEYVNLDLRLQIGPNNKRNHYNMGIRDFMLQHQSNKKHFRSDYSS-TT
        MGSSSTQEWLELSLGL ST KE  QK+EKEDEKRSRLYQEKLV+CGTTSHEESEYVNLDLRLQIGPNNK N+ NMGIRDFMLQHQS KKHF SDYSS  T
Subjt:  MGSSSTQEWLELSLGLRSTEKEHQQKEEKEDEKRSRLYQEKLVVCGTTSHEESEYVNLDLRLQIGPNNKRNHYNMGIRDFMLQHQSNKKHFRSDYSS-TT

Query:  NSAGLWFSLLSSPNRSKL
        NSAGLWFSLLSSPNRS L
Subjt:  NSAGLWFSLLSSPNRSKL
A0A6J1F0B3 protein LAX PANICLE 2-like1.5e-0742.52Show/hide
Query:  MGSSSTQEWLELSLGLRSTEKEHQQKEEKEDEKRSRLYQEKLVVCGTTSHEESEYVNLDLRLQIGPNNKRNHYNMGIRDFMLQHQSNKKHFRSDYSSTT-
        MGS  ++EWLELSLGLR T+K+ ++ +++EDE                  EE E  +L LRLQIGP  K    NMGI  FM   Q+N+K     +S T  
Subjt:  MGSSSTQEWLELSLGLRSTEKEHQQKEEKEDEKRSRLYQEKLVVCGTTSHEESEYVNLDLRLQIGPNNKRNHYNMGIRDFMLQHQSNKKHFRSDYSSTT-

Query:  ------------NSAGLWFSLLSSPNR
                    N AGLWFSL SSPNR
Subjt:  ------------NSAGLWFSLLSSPNR
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGTTCCTCTTCTACTCAAGAGTGGCTAGAGTTGAGTTTAGGATTGAGATCCACAGAGAAGGAACATCAACAAAAAGAAGAAAAAGAAGATGAAAAAAGATCAAGACT
CTACCAAGAGAAATTAGTTGTTTGTGGAACCACTTCTCATGAGGAAAGTGAGTATGTTAATTTGGATTTGAGGCTTCAAATAGGGCCTAATAATAAACGTAATCATTATA
ATATGGGAATAAGGGATTTTATGCTTCAACATCAAAGCAACAAAAAGCACTTCCGTAGTGATTATTCTTCAACCACCAACTCTGCTGGTTTGTGGTTCTCACTACTCTCT
TCACCCAACAGGTCCAAACTTATAAACTCTTTTCTTCTTCTTTCTTTTTTCTTAATCTATCATATTCAAAAGAAAAGCTTTGATTTTCTTTTAAAAATCAATTGTAAAGT
TCTTTTTGTTATATACAACAGTTTGATTAAACTTCTTACTTCTTTATTTTGGTTTATTATGAAGTTCTTTTTTTTTAGGTCAATGTAA
mRNA sequenceShow/hide mRNA sequence
ATGGGTTCCTCTTCTACTCAAGAGTGGCTAGAGTTGAGTTTAGGATTGAGATCCACAGAGAAGGAACATCAACAAAAAGAAGAAAAAGAAGATGAAAAAAGATCAAGACT
CTACCAAGAGAAATTAGTTGTTTGTGGAACCACTTCTCATGAGGAAAGTGAGTATGTTAATTTGGATTTGAGGCTTCAAATAGGGCCTAATAATAAACGTAATCATTATA
ATATGGGAATAAGGGATTTTATGCTTCAACATCAAAGCAACAAAAAGCACTTCCGTAGTGATTATTCTTCAACCACCAACTCTGCTGGTTTGTGGTTCTCACTACTCTCT
TCACCCAACAGGTCCAAACTTATAAACTCTTTTCTTCTTCTTTCTTTTTTCTTAATCTATCATATTCAAAAGAAAAGCTTTGATTTTCTTTTAAAAATCAATTGTAAAGT
TCTTTTTGTTATATACAACAGTTTGATTAAACTTCTTACTTCTTTATTTTGGTTTATTATGAAGTTCTTTTTTTTTAGGTCAATGTAA
Protein sequenceShow/hide protein sequence
MGSSSTQEWLELSLGLRSTEKEHQQKEEKEDEKRSRLYQEKLVVCGTTSHEESEYVNLDLRLQIGPNNKRNHYNMGIRDFMLQHQSNKKHFRSDYSSTTNSAGLWFSLLS
SPNRSKLINSFLLLSFFLIYHIQKKSFDFLLKINCKVLFVIYNSLIKLLTSLFWFIMKFFFFRSM