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IVF0002943 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0002943
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionRING-type E3 ubiquitin transferase
Genome locationchr01:21164100..21164300
RNA-Seq ExpressionIVF0002943
SyntenyIVF0002943
Gene Ontology termsGO:0016567 - protein ubiquitination (biological process)
GO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004143556.1 E3 ubiquitin-protein ligase RING1 [Cucumis sativus]5.80e-2579.69Show/hide
Query:  MAIYQAMAKIQISEEGCSSNGTLMEVKNSISSRNSPFPNGEVGNQWLYDLVKSISFGCSTEKGG
        MAIYQA AKIQI EEGCSS+GTLMEVKNS+SSRN PFP G +GNQ LY+LVK ISFGCS +KGG
Subjt:  MAIYQAMAKIQISEEGCSSNGTLMEVKNSISSRNSPFPNGEVGNQWLYDLVKSISFGCSTEKGG

XP_022949771.1 E3 ubiquitin-protein ligase RING1-like [Cucurbita moschata]1.33e-1973.44Show/hide
Query:  MAIYQAMAKIQISEEGCSSNGTLMEVKNSISSRNSPFPNGEVGNQWLYDLVKSISFGCSTEKGG
        MAIYQA AKIQI EEG SS+G L+EVKNS+SSRN PFP   VGNQ LY+LVKSI FG S +KGG
Subjt:  MAIYQAMAKIQISEEGCSSNGTLMEVKNSISSRNSPFPNGEVGNQWLYDLVKSISFGCSTEKGG

XP_022978507.1 RING-H2 finger protein ATL54-like [Cucurbita maxima]1.33e-1973.44Show/hide
Query:  MAIYQAMAKIQISEEGCSSNGTLMEVKNSISSRNSPFPNGEVGNQWLYDLVKSISFGCSTEKGG
        MAIYQA AKIQI EEG SS+G L+EVKNS+SSRN PFP   VGNQ LY+LVKSI FG S +KGG
Subjt:  MAIYQAMAKIQISEEGCSSNGTLMEVKNSISSRNSPFPNGEVGNQWLYDLVKSISFGCSTEKGG

XP_023544216.1 E3 ubiquitin-protein ligase RING1-like [Cucurbita pepo subsp. pepo]1.36e-1973.44Show/hide
Query:  MAIYQAMAKIQISEEGCSSNGTLMEVKNSISSRNSPFPNGEVGNQWLYDLVKSISFGCSTEKGG
        MAIYQA AKIQI EEG SS+G L+EVKNS+SSRN PFP   VGNQ LY+LVKSI FG S +KGG
Subjt:  MAIYQAMAKIQISEEGCSSNGTLMEVKNSISSRNSPFPNGEVGNQWLYDLVKSISFGCSTEKGG

XP_038883202.1 E3 ubiquitin-protein ligase RING1-like [Benincasa hispida]1.02e-1973.44Show/hide
Query:  MAIYQAMAKIQISEEGCSSNGTLMEVKNSISSRNSPFPNGEVGNQWLYDLVKSISFGCSTEKGG
        MAIYQA AKIQI EEGCSSNG ++EVKNS  SRN PFP G VGNQ LY+LVKSISFG   +K G
Subjt:  MAIYQAMAKIQISEEGCSSNGTLMEVKNSISSRNSPFPNGEVGNQWLYDLVKSISFGCSTEKGG

TrEMBL top hitse value%identityAlignment
A0A0A0KK07 RING-type E3 ubiquitin transferase5.0e-2079.69Show/hide
Query:  MAIYQAMAKIQISEEGCSSNGTLMEVKNSISSRNSPFPNGEVGNQWLYDLVKSISFGCSTEKGG
        MAIYQA AKIQI EEGCSS+GTLMEVKNS+SSRN PFP G +GNQ LY+LVK ISFGCS +KGG
Subjt:  MAIYQAMAKIQISEEGCSSNGTLMEVKNSISSRNSPFPNGEVGNQWLYDLVKSISFGCSTEKGG

A0A1S3B1E6 RING-type E3 ubiquitin transferase5.9e-1368.75Show/hide
Query:  MAIYQAMAKIQISEEGCSSNGTLMEVKNSISSRNSPFPNGEVGNQWLYDLVKSISFGCSTEKGG
        MAIYQ   KIQI EEGCSSNGTLMEVK+S+SS+N       +GNQ LY+LVKSISFG S +KGG
Subjt:  MAIYQAMAKIQISEEGCSSNGTLMEVKNSISSRNSPFPNGEVGNQWLYDLVKSISFGCSTEKGG

A0A5A7T0B5 RING-type E3 ubiquitin transferase5.9e-1368.75Show/hide
Query:  MAIYQAMAKIQISEEGCSSNGTLMEVKNSISSRNSPFPNGEVGNQWLYDLVKSISFGCSTEKGG
        MAIYQ   KIQI EEGCSSNGTLMEVK+S+SS+N       +GNQ LY+LVKSISFG S +KGG
Subjt:  MAIYQAMAKIQISEEGCSSNGTLMEVKNSISSRNSPFPNGEVGNQWLYDLVKSISFGCSTEKGG

A0A6J1GCY1 RING-type E3 ubiquitin transferase1.3e-1573.44Show/hide
Query:  MAIYQAMAKIQISEEGCSSNGTLMEVKNSISSRNSPFPNGEVGNQWLYDLVKSISFGCSTEKGG
        MAIYQA AKIQI EEG SS+G L+EVKNS+SSRN PFP   VGNQ LY+LVKSI FG S +KGG
Subjt:  MAIYQAMAKIQISEEGCSSNGTLMEVKNSISSRNSPFPNGEVGNQWLYDLVKSISFGCSTEKGG

A0A6J1IL98 RING-type E3 ubiquitin transferase1.3e-1573.44Show/hide
Query:  MAIYQAMAKIQISEEGCSSNGTLMEVKNSISSRNSPFPNGEVGNQWLYDLVKSISFGCSTEKGG
        MAIYQA AKIQI EEG SS+G L+EVKNS+SSRN PFP   VGNQ LY+LVKSI FG S +KGG
Subjt:  MAIYQAMAKIQISEEGCSSNGTLMEVKNSISSRNSPFPNGEVGNQWLYDLVKSISFGCSTEKGG

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGATTTATCAAGCCATGGCCAAAATACAAATTTCAGAAGAAGGGTGTTCTTCAAATGGAACGTTAATGGAAGTGAAGAATTCAATTTCCTCTAGAAATTCTCCATT
TCCAAATGGAGAAGTTGGAAACCAATGGTTGTATGATTTGGTGAAGAGCATTTCATTTGGGTGTTCTACGGAGAAAGGGGGATTTCGATGA
mRNA sequenceShow/hide mRNA sequence
ATGGCGATTTATCAAGCCATGGCCAAAATACAAATTTCAGAAGAAGGGTGTTCTTCAAATGGAACGTTAATGGAAGTGAAGAATTCAATTTCCTCTAGAAATTCTCCATT
TCCAAATGGAGAAGTTGGAAACCAATGGTTGTATGATTTGGTGAAGAGCATTTCATTTGGGTGTTCTACGGAGAAAGGGGGATTTCGATGA
Protein sequenceShow/hide protein sequence
MAIYQAMAKIQISEEGCSSNGTLMEVKNSISSRNSPFPNGEVGNQWLYDLVKSISFGCSTEKGGFR