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IVF0002953 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0002953
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionNBS-LRR type resistance protein
Genome locationchr05:18600771..18601013
RNA-Seq ExpressionIVF0002953
SyntenyIVF0002953
Gene Ontology termsGO:0005488 - binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0040517.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa]3.13e-0562.79Show/hide
Query:  EDDPTLGSTWRRKLARTCLEEDTAAGSSMEDDRATASGEDRRS
        +DD TLGS W R+LAR  LEED AA SS+EDD AT S +++RS
Subjt:  EDDPTLGSTWRRKLARTCLEEDTAAGSSMEDDRATASGEDRRS

KAA0051832.1 NBS-LRR type resistance protein [Cucumis melo var. makuwa]4.39e-0766.67Show/hide
Query:  DDPTLGSTWRRKLARTCLEEDTAAGSSMEDDRATASGEDRRS
        DDP LGS W R+LAR  LEED  AGSSMED  A  SG+D+RS
Subjt:  DDPTLGSTWRRKLARTCLEEDTAAGSSMEDDRATASGEDRRS

TYK23446.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa]3.13e-0562.79Show/hide
Query:  EDDPTLGSTWRRKLARTCLEEDTAAGSSMEDDRATASGEDRRS
        +DD TLGS W R+LAR  LEED AA SS+EDD AT S +++RS
Subjt:  EDDPTLGSTWRRKLARTCLEEDTAAGSSMEDDRATASGEDRRS

TrEMBL top hitse value%identityAlignment
A0A5A7U7U5 NBS-LRR type resistance protein1.6e-0466.67Show/hide
Query:  DDPTLGSTWRRKLARTCLEEDTAAGSSMEDDRATASGEDRRS
        DDP LGS W R+LAR  LEED  AGSSMED  A  SG+D+RS
Subjt:  DDPTLGSTWRRKLARTCLEEDTAAGSSMEDDRATASGEDRRS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGGCAAGAAGCAGCTGAAGACCGAGTGTTTCAGACGTCGGTGAACAAGAAAGCAACAGGTAAGGCTCGGTTAGAAAACAGGGGTCGACTTGCTCGGCTCAGCTCGGG
GGAGGACGACCCAACACTTGGATCGACTTGGAGAAGAAAGCTGGCTCGCACGTGCTTGGAGGAAGACACGGCAGCTGGCAGTTCCATGGAAGACGATAGAGCTACGGCGA
GCGGAGAAGATCGACGTTCGTGA
mRNA sequenceShow/hide mRNA sequence
ATGAGGCAAGAAGCAGCTGAAGACCGAGTGTTTCAGACGTCGGTGAACAAGAAAGCAACAGGTAAGGCTCGGTTAGAAAACAGGGGTCGACTTGCTCGGCTCAGCTCGGG
GGAGGACGACCCAACACTTGGATCGACTTGGAGAAGAAAGCTGGCTCGCACGTGCTTGGAGGAAGACACGGCAGCTGGCAGTTCCATGGAAGACGATAGAGCTACGGCGA
GCGGAGAAGATCGACGTTCGTGA
Protein sequenceShow/hide protein sequence
MRQEAAEDRVFQTSVNKKATGKARLENRGRLARLSSGEDDPTLGSTWRRKLARTCLEEDTAAGSSMEDDRATASGEDRRS