; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

IVF0002981 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0002981
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionPSI-G
Genome locationchr06:23065383..23066682
RNA-Seq ExpressionIVF0002981
SyntenyIVF0002981
Gene Ontology termsGO:0015979 - photosynthesis (biological process)
GO:0009522 - photosystem I (cellular component)
GO:0009535 - chloroplast thylakoid membrane (cellular component)
GO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004149569.1 photosystem I reaction center subunit V, chloroplastic [Cucumis sativus]7.11e-3691.25Show/hide
Query:  AAASSSAVFVAPTFSATATRQQPSPTTISFQGLRALPSVKSSRSIVATKTRRSMTVKAELNPSLVISLSTGLSLFLGSVI
        AAASSSAVF APTFSATATRQQP+PTTISFQGLRALPSVKSSRS+VATK+RRSMTVKAELNPSLVISLSTGLSLFLG  +
Subjt:  AAASSSAVFVAPTFSATATRQQPSPTTISFQGLRALPSVKSSRSIVATKTRRSMTVKAELNPSLVISLSTGLSLFLGSVI
XP_008449063.1 PREDICTED: photosystem I reaction center subunit V, chloroplastic [Cucumis melo]1.81e-3896.3Show/hide
Query:  MAAASSSAVFVAPTFSATATRQQPSPTTISFQGLRALPSVKSSRSIVATKTRRSMTVKAELNPSLVISLSTGLSLFLGSVI
        MAAASSSAVFVAPTFSATATRQQPSPTTISFQGLRALPSVKSSRSIVATKTRRSMTVKAELNPSLVISLSTGLSLFLG  +
Subjt:  MAAASSSAVFVAPTFSATATRQQPSPTTISFQGLRALPSVKSSRSIVATKTRRSMTVKAELNPSLVISLSTGLSLFLGSVI
XP_022934047.1 photosystem I reaction center subunit V, chloroplastic-like [Cucurbita moschata]3.24e-2470Show/hide
Query:  AAASSSAVFVAPTFSATATRQQPSPTTISFQGLRALPSVKSSRSIVATKTRRSMTVKAELNPSLVISLSTGLSLFLGSVI
        AAASSSAVF A +FSA+  RQQP+P+TIS+QGLR LP +KSSRS+   K+ RS+ VKAELNPS+VISLSTGLSLFLG  +
Subjt:  AAASSSAVFVAPTFSATATRQQPSPTTISFQGLRALPSVKSSRSIVATKTRRSMTVKAELNPSLVISLSTGLSLFLGSVI
XP_023005588.1 photosystem I reaction center subunit V, chloroplastic-like [Cucurbita maxima]2.29e-2470Show/hide
Query:  AAASSSAVFVAPTFSATATRQQPSPTTISFQGLRALPSVKSSRSIVATKTRRSMTVKAELNPSLVISLSTGLSLFLGSVI
        A ASSSAVF A +FSA   RQQP+P+TIS+QGLR LP +KSSRS+ A K+ RS+ VKAELNPS+VISLSTGLSLFLG  +
Subjt:  AAASSSAVFVAPTFSATATRQQPSPTTISFQGLRALPSVKSSRSIVATKTRRSMTVKAELNPSLVISLSTGLSLFLGSVI
XP_038903014.1 photosystem I reaction center subunit V, chloroplastic [Benincasa hispida]1.65e-2981.01Show/hide
Query:  AASSSAVFVAPTFSATATRQQPSPTTISFQGLRALPSVKSSRSIVATKTRRSMTVKAELNPSLVISLSTGLSLFLGSVI
        AASSSA+F APTFSA ATRQQP+PT +SFQGLRALPSVKSSR  VA K+RRS+ VKAELNPSLVISLSTGLSLFLG  +
Subjt:  AASSSAVFVAPTFSATATRQQPSPTTISFQGLRALPSVKSSRSIVATKTRRSMTVKAELNPSLVISLSTGLSLFLGSVI
TrEMBL top hitse value%identityAlignment
A0A0A0L4W3 PSI-G1.2e-2691.25Show/hide
Query:  AAASSSAVFVAPTFSATATRQQPSPTTISFQGLRALPSVKSSRSIVATKTRRSMTVKAELNPSLVISLSTGLSLFLGSVI
        AAASSSAVF APTFSATATRQQP+PTTISFQGLRALPSVKSSRS+VATK+RRSMTVKAELNPSLVISLSTGLSLFLG  +
Subjt:  AAASSSAVFVAPTFSATATRQQPSPTTISFQGLRALPSVKSSRSIVATKTRRSMTVKAELNPSLVISLSTGLSLFLGSVI
A0A1S3BKK6 PSI-G1.3e-2896.3Show/hide
Query:  MAAASSSAVFVAPTFSATATRQQPSPTTISFQGLRALPSVKSSRSIVATKTRRSMTVKAELNPSLVISLSTGLSLFLGSVI
        MAAASSSAVFVAPTFSATATRQQPSPTTISFQGLRALPSVKSSRSIVATKTRRSMTVKAELNPSLVISLSTGLSLFLG  +
Subjt:  MAAASSSAVFVAPTFSATATRQQPSPTTISFQGLRALPSVKSSRSIVATKTRRSMTVKAELNPSLVISLSTGLSLFLGSVI
A0A5D3CPR0 PSI-G1.3e-2896.3Show/hide
Query:  MAAASSSAVFVAPTFSATATRQQPSPTTISFQGLRALPSVKSSRSIVATKTRRSMTVKAELNPSLVISLSTGLSLFLGSVI
        MAAASSSAVFVAPTFSATATRQQPSPTTISFQGLRALPSVKSSRSIVATKTRRSMTVKAELNPSLVISLSTGLSLFLG  +
Subjt:  MAAASSSAVFVAPTFSATATRQQPSPTTISFQGLRALPSVKSSRSIVATKTRRSMTVKAELNPSLVISLSTGLSLFLGSVI
A0A6J1F1K2 PSI-G1.0e-1770Show/hide
Query:  AAASSSAVFVAPTFSATATRQQPSPTTISFQGLRALPSVKSSRSIVATKTRRSMTVKAELNPSLVISLSTGLSLFLGSVI
        AAASSSAVF A +FSA+  RQQP+P+TIS+QGLR LP +KSSRS+   K+ RS+ VKAELNPS+VISLSTGLSLFLG  +
Subjt:  AAASSSAVFVAPTFSATATRQQPSPTTISFQGLRALPSVKSSRSIVATKTRRSMTVKAELNPSLVISLSTGLSLFLGSVI
A0A6J1L2L3 PSI-G7.8e-1870Show/hide
Query:  AAASSSAVFVAPTFSATATRQQPSPTTISFQGLRALPSVKSSRSIVATKTRRSMTVKAELNPSLVISLSTGLSLFLGSVI
        A ASSSAVF A +FSA   RQQP+P+TIS+QGLR LP +KSSRS+ A K+ RS+ VKAELNPS+VISLSTGLSLFLG  +
Subjt:  AAASSSAVFVAPTFSATATRQQPSPTTISFQGLRALPSVKSSRSIVATKTRRSMTVKAELNPSLVISLSTGLSLFLGSVI
SwissProt top hitse value%identityAlignment
P12357 Photosystem I reaction center subunit V, chloroplastic5.1e-0646.81Show/hide
Query:  MAAASSSAVFVAPTFSATATRQQPSP---------TTISFQGLRAL----PSVKSSRSIVATKTRRSMTVKAELNPSLVISLSTGLSLFLGSVI
        MAAA++S   ++ T  A  + +QP P            SF GLR L     S  SS S+  +  RRSMT +AEL+PSLVISLSTGLSLFLG  +
Subjt:  MAAASSSAVFVAPTFSATATRQQPSP---------TTISFQGLRAL----PSVKSSRSIVATKTRRSMTVKAELNPSLVISLSTGLSLFLGSVI
Q9S7N7 Photosystem I reaction center subunit V, chloroplastic3.0e-0639.62Show/hide
Query:  ASSSAVFVAPTFSATATRQQPSPTTISFQGLRALPSVKSSRSI--VATKTRRSMT--VKAELNPSLVISLSTGLSLFLGSVIGIARHIREVGADGATTSH
        A+S++  ++PT  +TA   + +P +ISF GLR L    SS ++  ++T  R+S +  V+AEL+PS+VISLSTGLSLFLG  +        V   G    +
Subjt:  ASSSAVFVAPTFSATATRQQPSPTTISFQGLRALPSVKSSRSI--VATKTRRSMT--VKAELNPSLVISLSTGLSLFLGSVIGIARHIREVGADGATTSH

Query:  GRAPVE
        G+   E
Subjt:  GRAPVE
Arabidopsis top hitse value%identityAlignment
AT1G55670.1 photosystem I subunit G2.1e-0739.62Show/hide
Query:  ASSSAVFVAPTFSATATRQQPSPTTISFQGLRALPSVKSSRSI--VATKTRRSMT--VKAELNPSLVISLSTGLSLFLGSVIGIARHIREVGADGATTSH
        A+S++  ++PT  +TA   + +P +ISF GLR L    SS ++  ++T  R+S +  V+AEL+PS+VISLSTGLSLFLG  +        V   G    +
Subjt:  ASSSAVFVAPTFSATATRQQPSPTTISFQGLRALPSVKSSRSI--VATKTRRSMT--VKAELNPSLVISLSTGLSLFLGSVIGIARHIREVGADGATTSH

Query:  GRAPVE
        G+   E
Subjt:  GRAPVE

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCGCCGCCTCCTCCTCCGCCGTCTTCGTCGCCCCAACCTTCTCGGCTACCGCCACGAGGCAGCAGCCCAGTCCCACCACCATATCGTTCCAAGGCCTCCGTGCGCT
CCCCAGCGTGAAATCGAGCCGGTCGATTGTTGCGACAAAGACCCGGAGATCGATGACGGTGAAGGCGGAACTGAATCCATCTCTAGTGATAAGCCTAAGCACAGGGCTGT
CCTTGTTCTTAGGGAGCGTCATCGGAATTGCGAGACATATCAGAGAGGTTGGAGCCGATGGAGCCACCACGAGTCATGGCAGAGCTCCGGTAGAAAAGAACCAATGTGAG
TGGTAG
mRNA sequenceShow/hide mRNA sequence
ATGGCCGCCGCCTCCTCCTCCGCCGTCTTCGTCGCCCCAACCTTCTCGGCTACCGCCACGAGGCAGCAGCCCAGTCCCACCACCATATCGTTCCAAGGCCTCCGTGCGCT
CCCCAGCGTGAAATCGAGCCGGTCGATTGTTGCGACAAAGACCCGGAGATCGATGACGGTGAAGGCGGAACTGAATCCATCTCTAGTGATAAGCCTAAGCACAGGGCTGT
CCTTGTTCTTAGGGAGCGTCATCGGAATTGCGAGACATATCAGAGAGGTTGGAGCCGATGGAGCCACCACGAGTCATGGCAGAGCTCCGGTAGAAAAGAACCAATGTGAG
TGGTAGGAGAACACAAACAATTGGATTTTGAGAAGCGAGATAAAGCTATTGGTGAGAGCAATAAATTTGGGGTTTTCTTTAGCTCTTCCATGTCGTATTCCGGCAATGCT
CCCATTTTTGAACTCTCTGTTTGAACTCTCTGTTTTCCCTTCTGCTCATCCCTCCATTTATCCAAGAAGAATTTCAAATATAACGATTAGATTCAAATTATTATTATATA
CGAC
Protein sequenceShow/hide protein sequence
MAAASSSAVFVAPTFSATATRQQPSPTTISFQGLRALPSVKSSRSIVATKTRRSMTVKAELNPSLVISLSTGLSLFLGSVIGIARHIREVGADGATTSHGRAPVEKNQCE
W