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IVF0002986 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0002986
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionGlial fibrillary acidic protein-like
Genome locationchr05:6940588..6940944
RNA-Seq ExpressionIVF0002986
SyntenyIVF0002986
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0033221.1 uncharacterized protein E6C27_scaffold845G00100 [Cucumis melo var. makuwa]2.19e-2388.46Show/hide
Query:  MLFIWISSHLRYPNNFGYLQIKFSSPWNNTRNTIREFNSAHWDPKDTEFGVW
        MLFIWISSHLRYPNNFGY QIKF+SPWN TRNTIREFNSAHWDPKD EFG +
Subjt:  MLFIWISSHLRYPNNFGYLQIKFSSPWNNTRNTIREFNSAHWDPKDTEFGVW

KAA0037618.1 uncharacterized protein E6C27_scaffold277G002790 [Cucumis melo var. makuwa]2.21e-2145.26Show/hide
Query:  MLFIWISSHLRYPNNFGYLQIKFSSPWNNTRNTIREFNSAHWDPKDTEFGVWMQFFSHLTTIDAIWRAPWMLTSPLTHRCGKLAIILLLGLWGGA
        +L+IWI SH+++P  F   ++ FSSPWN  RNTI EF  A WDP       W+ FF+ LT+ + IW+A WM    + +RCG    + LLG WGG 
Subjt:  MLFIWISSHLRYPNNFGYLQIKFSSPWNNTRNTIREFNSAHWDPKDTEFGVWMQFFSHLTTIDAIWRAPWMLTSPLTHRCGKLAIILLLGLWGGA

KAA0065295.1 uncharacterized protein E6C27_scaffold1023G00080 [Cucumis melo var. makuwa]5.39e-5691.49Show/hide
Query:  MLFIWISSHLRYPNNFGYLQIKFSSPWNNTRNTIREFNSAHWDPKDTEFGVWMQFFSHLTTIDAIWRAPWMLTSPLTHRCGKLAIILLLGLWGG
        MLFIWISSHLRYPNNFGY QIKFSSPWN TRNTIREFNSAHWDPKD EFGVWMQFFSHLTTI+AIWRAPWM TSPLT+RCGKLA I LLGLWGG
Subjt:  MLFIWISSHLRYPNNFGYLQIKFSSPWNNTRNTIREFNSAHWDPKDTEFGVWMQFFSHLTTIDAIWRAPWMLTSPLTHRCGKLAIILLLGLWGG

KGN65326.1 hypothetical protein Csa_019937 [Cucumis sativus]2.94e-2955.29Show/hide
Query:  MLFIWISSHLRYPNNFGYLQIKFSSPWNNTRNTIREFNSAHWDPKDTEFGVWMQFFSHLTTIDAIWRAPWMLTSPLTHRCGKLAI
        MLFIWISSHL+YP+ FG  +I+FSSPWN TRNT+++FN   W+PK  +   WM+FF H+T  + +WRAPW+ TSPL      +AI
Subjt:  MLFIWISSHLRYPNNFGYLQIKFSSPWNNTRNTIREFNSAHWDPKDTEFGVWMQFFSHLTTIDAIWRAPWMLTSPLTHRCGKLAI

TYK16834.1 glial fibrillary acidic protein-like [Cucumis melo var. makuwa]9.55e-6197.92Show/hide
Query:  MLFIWISSHLRYPNNFGYLQIKFSSPWNNTRNTIREFNSAHWDPKDTEFGVWMQFFSHLTTIDAIWRAPWMLTSPLTHRCGKLAIILLLGLWGGAL
        MLFIWISSHLRYPNNFGYLQIKFSSPWNNTRNTIREFNSAHWDPKDTEFGVWMQFFSHLTTIDAIWRAPWMLTSPLTHRCGKLAIILLLGLWGG +
Subjt:  MLFIWISSHLRYPNNFGYLQIKFSSPWNNTRNTIREFNSAHWDPKDTEFGVWMQFFSHLTTIDAIWRAPWMLTSPLTHRCGKLAIILLLGLWGGAL

TrEMBL top hitse value%identityAlignment
A0A0A0LZC9 Uncharacterized protein9.5e-2252.69Show/hide
Query:  MLFIWISSHLRYPNNFGYLQIKFSSPWNNTRNTIREFNSAHWDPKDTEFGVWMQFFSHLTTIDAIWRAPWMLTSPLTHRCGKLAIILLLGLWG
        MLFIWISSHL+YP+ FG  +I+FSSPWN TRNT+++FN   W+PK  +   WM+FF H+T  + +WRAPW+ TSPL      +AI     L G
Subjt:  MLFIWISSHLRYPNNFGYLQIKFSSPWNNTRNTIREFNSAHWDPKDTEFGVWMQFFSHLTTIDAIWRAPWMLTSPLTHRCGKLAIILLLGLWG

A0A5A7SUT0 Reverse transcriptase8.9e-2088.46Show/hide
Query:  MLFIWISSHLRYPNNFGYLQIKFSSPWNNTRNTIREFNSAHWDPKDTEFGVW
        MLFIWISSHLRYPNNFGY QIKF+SPWN TRNTIREFNSAHWDPKD EFG +
Subjt:  MLFIWISSHLRYPNNFGYLQIKFSSPWNNTRNTIREFNSAHWDPKDTEFGVW

A0A5A7T5S7 Girdin-like4.1e-1745.74Show/hide
Query:  MLFIWISSHLRYPNNFGYLQIKFSSPWNNTRNTIREFNSAHWDPKDTEFGVWMQFFSHLTTIDAIWRAPWMLTSPLTHRCGKLAIILLLGLWGG
        +L+IWI SH+++P  F   ++ FSSPWN  RNTI EF  A WDP       W+ FF+ LT+ + IW+A WM    + +RCG    + LLG WGG
Subjt:  MLFIWISSHLRYPNNFGYLQIKFSSPWNNTRNTIREFNSAHWDPKDTEFGVWMQFFSHLTTIDAIWRAPWMLTSPLTHRCGKLAIILLLGLWGG

A0A5A7VHI3 Uncharacterized protein4.7e-4587.13Show/hide
Query:  MLFIWISSHLRYPNNFGYLQIKFSSPWNNTRNTIREFNSAHWDPKDTEFGVWMQFFSHLTTIDAIWRAPWMLTSPLTHRCGKLAIILLLGLWGGALLILL
        MLFIWISSHLRYPNNFGY QIKFSSPWN TRNTIREFNSAHWDPKD EFGVWMQFFSHLTTI+AIWRAPWM TSPLT+RCGKLA I LLGLWGG  L   
Subjt:  MLFIWISSHLRYPNNFGYLQIKFSSPWNNTRNTIREFNSAHWDPKDTEFGVWMQFFSHLTTIDAIWRAPWMLTSPLTHRCGKLAIILLLGLWGGALLILL

Query:  F
        F
Subjt:  F

A0A5D3D0S2 Glial fibrillary acidic protein-like1.3e-5097.92Show/hide
Query:  MLFIWISSHLRYPNNFGYLQIKFSSPWNNTRNTIREFNSAHWDPKDTEFGVWMQFFSHLTTIDAIWRAPWMLTSPLTHRCGKLAIILLLGLWGGAL
        MLFIWISSHLRYPNNFGYLQIKFSSPWNNTRNTIREFNSAHWDPKDTEFGVWMQFFSHLTTIDAIWRAPWMLTSPLTHRCGKLAIILLLGLWGG +
Subjt:  MLFIWISSHLRYPNNFGYLQIKFSSPWNNTRNTIREFNSAHWDPKDTEFGVWMQFFSHLTTIDAIWRAPWMLTSPLTHRCGKLAIILLLGLWGGAL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCTCTTCATTTGGATTTCCAGTCATCTACGGTATCCTAATAATTTTGGATATCTTCAAATAAAATTCAGCAGTCCATGGAATAATACAAGAAACACTATTAGAGAATT
CAATAGTGCACACTGGGATCCAAAGGATACAGAATTTGGGGTTTGGATGCAGTTTTTCAGCCATTTAACGACAATAGATGCAATTTGGAGAGCCCCTTGGATGCTCACAA
GTCCTTTGACACACCGTTGTGGAAAATTGGCTATTATCCTACTATTAGGCTTATGGGGGGGGGCATTGCTTATTCTCCTCTTTTGGTACTACGTCAATCCTGGTCAAAAC
AATTTGCACCAGTTGTATGTGGGCTAG
mRNA sequenceShow/hide mRNA sequence
ATGCTCTTCATTTGGATTTCCAGTCATCTACGGTATCCTAATAATTTTGGATATCTTCAAATAAAATTCAGCAGTCCATGGAATAATACAAGAAACACTATTAGAGAATT
CAATAGTGCACACTGGGATCCAAAGGATACAGAATTTGGGGTTTGGATGCAGTTTTTCAGCCATTTAACGACAATAGATGCAATTTGGAGAGCCCCTTGGATGCTCACAA
GTCCTTTGACACACCGTTGTGGAAAATTGGCTATTATCCTACTATTAGGCTTATGGGGGGGGGCATTGCTTATTCTCCTCTTTTGGTACTACGTCAATCCTGGTCAAAAC
AATTTGCACCAGTTGTATGTGGGCTAG
Protein sequenceShow/hide protein sequence
MLFIWISSHLRYPNNFGYLQIKFSSPWNNTRNTIREFNSAHWDPKDTEFGVWMQFFSHLTTIDAIWRAPWMLTSPLTHRCGKLAIILLLGLWGGALLILLFWYYVNPGQN
NLHQLYVG