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IVF0002988 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0002988
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionRNA-directed DNA polymerase
Genome locationchr07:7892368..7892760
RNA-Seq ExpressionIVF0002988
SyntenyIVF0002988
Gene Ontology termsGO:0005488 - binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0057976.1 uncharacterized protein E6C27_scaffold274G002800 [Cucumis melo var. makuwa]1.24e-3081.58Show/hide
Query:  NRKVAEYAEEFHRRSARTRTNKSENYQIARFVDGLKEDIHEQLDLQPMATLPAAILMGFKAEMKLEKRQKNGSTSR
        NRKVAEYAEEFH  SA T+TN+SEN QIARFVDGLKEDIHEQLDLQP+ATLPAAILM  KA+MKLEKRQKN  T +
Subjt:  NRKVAEYAEEFHRRSARTRTNKSENYQIARFVDGLKEDIHEQLDLQPMATLPAAILMGFKAEMKLEKRQKNGSTSR

KAA0064244.1 uncharacterized protein E6C27_scaffold548G001980 [Cucumis melo var. makuwa]7.91e-83100Show/hide
Query:  MSLRRNRKVAEYAEEFHRRSARTRTNKSENYQIARFVDGLKEDIHEQLDLQPMATLPAAILMGFKAEMKLEKRQKNGSTSRKRKYLQAHMDGSKSETLTF
        MSLRRNRKVAEYAEEFHRRSARTRTNKSENYQIARFVDGLKEDIHEQLDLQPMATLPAAILMGFKAEMKLEKRQKNGSTSRKRKYLQAHMDGSKSETLTF
Subjt:  MSLRRNRKVAEYAEEFHRRSARTRTNKSENYQIARFVDGLKEDIHEQLDLQPMATLPAAILMGFKAEMKLEKRQKNGSTSRKRKYLQAHMDGSKSETLTF

Query:  YESNRKISFQEQEGSQEATFYIQEKWKNHR
        YESNRKISFQEQEGSQEATFYIQEKWKNHR
Subjt:  YESNRKISFQEQEGSQEATFYIQEKWKNHR

TYK13853.1 uncharacterized protein E5676_scaffold832G00370 [Cucumis melo var. makuwa]9.16e-3081.58Show/hide
Query:  NRKVAEYAEEFHRRSARTRTNKSENYQIARFVDGLKEDIHEQLDLQPMATLPAAILMGFKAEMKLEKRQKNGSTSR
        NRKVAEYA+EFH  SARTRTN+SENYQIA+FVDGLKEDIHEQ+DLQP+ATL AAI M FKAEMKLEKRQKN  T +
Subjt:  NRKVAEYAEEFHRRSARTRTNKSENYQIARFVDGLKEDIHEQLDLQPMATLPAAILMGFKAEMKLEKRQKNGSTSR

TYK16074.1 hypothetical protein E5676_scaffold32G00940 [Cucumis melo var. makuwa]3.02e-1575.93Show/hide
Query:  ARTRTNKSENYQIARFVDGLKEDIHEQLDLQPMATLPAAILMGFKAEMKLEKRQ
        ARTR NKSENYQ+A FVD LKE I +QLDLQP+ATL  AI M FKAEMKLEKR+
Subjt:  ARTRTNKSENYQIARFVDGLKEDIHEQLDLQPMATLPAAILMGFKAEMKLEKRQ

XP_022138328.1 uncharacterized protein LOC111009540 isoform X2 [Momordica charantia]1.70e-0952.46Show/hide
Query:  VAEYAEEFHRRSARTRTNKSENYQIARFVDGLKEDIHEQLDLQPMATLPAAILMGFKAEMK
        +A+Y E FHR  A+T   ++E+Y+IARFVDGL+EDI +Q+D+QP+  L  AI+M  K E K
Subjt:  VAEYAEEFHRRSARTRTNKSENYQIARFVDGLKEDIHEQLDLQPMATLPAAILMGFKAEMK

TrEMBL top hitse value%identityAlignment
A0A5A7UUZ0 Retrotrans_gag domain-containing protein1.9e-2381.58Show/hide
Query:  NRKVAEYAEEFHRRSARTRTNKSENYQIARFVDGLKEDIHEQLDLQPMATLPAAILMGFKAEMKLEKRQKNGSTSR
        NRKVAEYAEEFH  SA T+TN+SEN QIARFVDGLKEDIHEQLDLQP+ATLPAAILM  KA+MKLEKRQKN  T +
Subjt:  NRKVAEYAEEFHRRSARTRTNKSENYQIARFVDGLKEDIHEQLDLQPMATLPAAILMGFKAEMKLEKRQKNGSTSR

A0A5D3CPR5 Uncharacterized protein6.6e-2479.49Show/hide
Query:  NRKVAEYAEEFHRRSARTRTNKSENYQIARFVDGLKEDIHEQLDLQPMATLPAAILMGFKAEMKLEKRQKNGSTSRKR
        NRKVAEYA+EFH  SARTRTN+SENYQIA+FVDGLKEDIHEQ+DLQP+ATL AAI M FKAEMKLEKRQKN  T + +
Subjt:  NRKVAEYAEEFHRRSARTRTNKSENYQIARFVDGLKEDIHEQLDLQPMATLPAAILMGFKAEMKLEKRQKNGSTSRKR

A0A5D3CYP4 Uncharacterized protein2.9e-1158.75Show/hide
Query:  ARTRTNKSENYQIARFVDGLKEDIHEQLDLQPMATLPAAILMGFKAEMKLEKR------QKNGSTSRKRKYLQAHMDGSK
        ARTR NKSENYQ+A FVD LKE I +QLDLQP+ATL  AI M FKAEMKLEKR      +KN S      Y + + D  K
Subjt:  ARTRTNKSENYQIARFVDGLKEDIHEQLDLQPMATLPAAILMGFKAEMKLEKR------QKNGSTSRKRKYLQAHMDGSK

A0A5D3D505 Uncharacterized protein3.2e-63100Show/hide
Query:  MSLRRNRKVAEYAEEFHRRSARTRTNKSENYQIARFVDGLKEDIHEQLDLQPMATLPAAILMGFKAEMKLEKRQKNGSTSRKRKYLQAHMDGSKSETLTF
        MSLRRNRKVAEYAEEFHRRSARTRTNKSENYQIARFVDGLKEDIHEQLDLQPMATLPAAILMGFKAEMKLEKRQKNGSTSRKRKYLQAHMDGSKSETLTF
Subjt:  MSLRRNRKVAEYAEEFHRRSARTRTNKSENYQIARFVDGLKEDIHEQLDLQPMATLPAAILMGFKAEMKLEKRQKNGSTSRKRKYLQAHMDGSKSETLTF

Query:  YESNRKISFQEQEGSQEATFYIQEKWKNHR
        YESNRKISFQEQEGSQEATFYIQEKWKNHR
Subjt:  YESNRKISFQEQEGSQEATFYIQEKWKNHR

A0A6J1CCQ8 uncharacterized protein LOC111009540 isoform X21.1e-0749.25Show/hide
Query:  RKVAEYAEEFHRRSARTRTNKSENYQIARFVDGLKEDIHEQLDLQPMATLPAAILMGFKAEMKLEKR
        + +A+Y E FHR  A+T   ++E+Y+IARFVDGL+EDI +Q+D+QP+  L  AI+M  K E K   R
Subjt:  RKVAEYAEEFHRRSARTRTNKSENYQIARFVDGLKEDIHEQLDLQPMATLPAAILMGFKAEMKLEKR

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCACTAAGGCGTAATAGGAAAGTGGCAGAATATGCTGAAGAATTCCATCGTCGAAGTGCAAGAACCCGGACGAACAAGAGTGAGAACTATCAAATAGCTAGATTTGT
TGATGGTCTTAAGGAAGACATACATGAACAACTTGACTTGCAGCCCATGGCCACATTACCAGCCGCTATTTTGATGGGTTTTAAGGCTGAAATGAAGCTGGAGAAAAGGC
AGAAAAATGGTAGCACATCAAGGAAGAGAAAATACTTACAAGCTCACATGGATGGGTCAAAAAGTGAAACTCTTACCTTTTACGAGTCCAACAGAAAGATTAGTTTCCAA
GAACAAGAAGGAAGTCAAGAAGCAACTTTTTACATACAAGAAAAGTGGAAGAATCATCGATAA
mRNA sequenceShow/hide mRNA sequence
ATGTCACTAAGGCGTAATAGGAAAGTGGCAGAATATGCTGAAGAATTCCATCGTCGAAGTGCAAGAACCCGGACGAACAAGAGTGAGAACTATCAAATAGCTAGATTTGT
TGATGGTCTTAAGGAAGACATACATGAACAACTTGACTTGCAGCCCATGGCCACATTACCAGCCGCTATTTTGATGGGTTTTAAGGCTGAAATGAAGCTGGAGAAAAGGC
AGAAAAATGGTAGCACATCAAGGAAGAGAAAATACTTACAAGCTCACATGGATGGGTCAAAAAGTGAAACTCTTACCTTTTACGAGTCCAACAGAAAGATTAGTTTCCAA
GAACAAGAAGGAAGTCAAGAAGCAACTTTTTACATACAAGAAAAGTGGAAGAATCATCGATAA
Protein sequenceShow/hide protein sequence
MSLRRNRKVAEYAEEFHRRSARTRTNKSENYQIARFVDGLKEDIHEQLDLQPMATLPAAILMGFKAEMKLEKRQKNGSTSRKRKYLQAHMDGSKSETLTFYESNRKISFQ
EQEGSQEATFYIQEKWKNHR