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IVF0002991 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0002991
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionRING-H2 finger protein
Genome locationchr10:16589773..16590681
RNA-Seq ExpressionIVF0002991
SyntenyIVF0002991
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
GFS33559.1 hypothetical protein Acr_00g0029270 [Actinidia rufa]5.50e-0740.18Show/hide
Query:  VRTEPPVHALRMVTMTAWRQNLHLLPIFKHAQANGTLPCIACGRGRILFRSRCLIQSDRKGVNRRGAEPLLLRRRPRLPADGKGGGKGGELVESADPTGV
        +RTEP V AL + TM A RQ+LH L IFKHA+AN  L     G          L++ D + VN    E  ++ RR R    G+  G+G  + E+ DP GV
Subjt:  VRTEPPVHALRMVTMTAWRQNLHLLPIFKHAQANGTLPCIACGRGRILFRSRCLIQSDRKGVNRRGAEPLLLRRRPRLPADGKGGGKGGELVESADPTGV

Query:  KENKSYEKDDGE
        +E    E++DGE
Subjt:  KENKSYEKDDGE

KAF7148294.1 hypothetical protein RHSIM_Rhsim03G0145300 [Rhododendron simsii]4.19e-0641.41Show/hide
Query:  MTAWRQNLHLLPIFKHAQANGTLPCIACGRGRILFRSRCLIQSDRKGVNRRGAEPLLLRRRPRLPADGKGGGKGGELVESAD-PTGVKENKSYEKDDGE
        M A RQ+ H LP+FK A+A  T   +  G       +R ++Q DR+ VN    E L LRRR     D  G G GGE  E+AD P+G +E +  E D+GE
Subjt:  MTAWRQNLHLLPIFKHAQANGTLPCIACGRGRILFRSRCLIQSDRKGVNRRGAEPLLLRRRPRLPADGKGGGKGGELVESAD-PTGVKENKSYEKDDGE

KAG5558017.1 hypothetical protein RHGRI_008053 [Rhododendron griersonianum]6.23e-0540.62Show/hide
Query:  MTAWRQNLHLLPIFKHAQANGTLPCIACGRGRILFRSRCLIQSDRKGVNRRGAEPLLLRRRPRLPADGKGGGKGGELVESAD-PTGVKENKSYEKD
        M A RQ+ H LP+FK A+A  T    A         +R ++Q DR+ VN    E L LRRR R   D  G   GGE  E+AD P+G +E +  E D
Subjt:  MTAWRQNLHLLPIFKHAQANGTLPCIACGRGRILFRSRCLIQSDRKGVNRRGAEPLLLRRRPRLPADGKGGGKGGELVESAD-PTGVKENKSYEKD

PON78998.1 hypothetical protein PanWU01x14_014990 [Parasponia andersonii]1.96e-1940.62Show/hide
Query:  RRINTERYTAKRAARVRTEPPVHALRMVTMTAWRQNLHLLPIFKHAQANGTLPCIACG-RGRILFRSRCLIQSDRKGVNRRGAEPLLLRRRPRLPADGKG
        RR+N+ER +AKRA R+ TEPP+HAL MV M A RQ+L LL + +H +A+  L  +    R R++ R   L++ +R+  +R G E L   +   L   G  
Subjt:  RRINTERYTAKRAARVRTEPPVHALRMVTMTAWRQNLHLLPIFKHAQANGTLPCIACG-RGRILFRSRCLIQSDRKGVNRRGAEPLLLRRRPRLPADGKG

Query:  GGKGGELVESADPTGVKENKSYEKDDGE
        GG+GG +  +ADP G++E +  +++DGE
Subjt:  GGKGGELVESADPTGVKENKSYEKDDGE

PSS33309.1 RING-H2 finger protein [Actinidia chinensis var. chinensis]4.88e-0940.54Show/hide
Query:  VRTEPPVHALRMVTMTAWRQNLHLLPIFKHAQANGTLPCIACGRGRILFRSRCLIQSDRKGVNRRGAEPLLLRRRPRLPADGKGGGKGGELVESADPTGV
        +RTEP V AL + TM A RQ+LH L IFKHA+AN  L     G      R   L++ D + VN    E  +L RR R    G+  G+G  + E+ DP GV
Subjt:  VRTEPPVHALRMVTMTAWRQNLHLLPIFKHAQANGTLPCIACGRGRILFRSRCLIQSDRKGVNRRGAEPLLLRRRPRLPADGKGGGKGGELVESADPTGV

Query:  KENKSYEKDDG
        +E +   ++DG
Subjt:  KENKSYEKDDG

TrEMBL top hitse value%identityAlignment
A0A0A0KSF2 Uncharacterized protein2.0e-3581.37Show/hide
Query:  MVTMTAWRQNLHLLPIFKHAQANGTLPCIACGRG-RILFRSRCLIQSDRKGVNRRGAEPLLLRRRPRLPADGKGGGKGGELVESADPTGVKENKSYEKDD
        MVTMTAWRQNLHLLP+FKHAQANG LPCI CG   RILFRSR L+QSDRKG N  GAE  LLRRR   P DGK GG+GGELVESADPTGVKENKSYEKDD
Subjt:  MVTMTAWRQNLHLLPIFKHAQANGTLPCIACGRG-RILFRSRCLIQSDRKGVNRRGAEPLLLRRRPRLPADGKGGGKGGELVESADPTGVKENKSYEKDD

Query:  GE
        GE
Subjt:  GE

A0A2P5E0D3 Uncharacterized protein6.7e-1537.84Show/hide
Query:  LSAQTFGFNRNGTSNHFKIVRRINTERYTAKRAARVRTEPPVHALRMVTMTAWRQNLHLLPIFKHAQANGTLPCIA-CGRGRILFRSRCLIQSDRKGVNR
        ++  T  F  N   N     RR+N+ER +AKRA R+ TEPP+HAL MV M A RQ+L LL + +H +A+  L  +    R R++ R   L++ +R+  +R
Subjt:  LSAQTFGFNRNGTSNHFKIVRRINTERYTAKRAARVRTEPPVHALRMVTMTAWRQNLHLLPIFKHAQANGTLPCIA-CGRGRILFRSRCLIQSDRKGVNR

Query:  RGAEPLLLRRRPRLPADGKGGGKGGELVESADPTGVKENKSYEKDDGE
         G E L   +   L   G  GG+GG +  +ADP G++E +  +++DGE
Subjt:  RGAEPLLLRRRPRLPADGKGGGKGGELVESADPTGVKENKSYEKDDGE

A0A2R6RTJ9 RING-H2 finger protein3.3e-0640.54Show/hide
Query:  VRTEPPVHALRMVTMTAWRQNLHLLPIFKHAQANGTLPCIACGRGRILFRSRCLIQSDRKGVNRRGAEPLLLRRRPRLPADGKGGGKGGELVESADPTGV
        +RTEP V AL + TM A RQ+LH L IFKHA+AN      A G      R   L++ D + VN    E  +L RR R    G+  G+G  + E+ DP GV
Subjt:  VRTEPPVHALRMVTMTAWRQNLHLLPIFKHAQANGTLPCIACGRGRILFRSRCLIQSDRKGVNRRGAEPLLLRRRPRLPADGKGGGKGGELVESADPTGV

Query:  KENKSYEKDDG
        +E +   ++DG
Subjt:  KENKSYEKDDG

A0A7J0DF29 Uncharacterized protein1.1e-0440.18Show/hide
Query:  VRTEPPVHALRMVTMTAWRQNLHLLPIFKHAQANGTLPCIACGRGRILFRSRCLIQSDRKGVNRRGAEPLLLRRRPRLPADGKGGGKGGELVESADPTGV
        +RTEP V AL + TM A RQ+LH L IFKHA+AN      A G          L++ D + VN    E  ++ RR R    G+  G+G  + E+ DP GV
Subjt:  VRTEPPVHALRMVTMTAWRQNLHLLPIFKHAQANGTLPCIACGRGRILFRSRCLIQSDRKGVNRRGAEPLLLRRRPRLPADGKGGGKGGELVESADPTGV

Query:  KENKSYEKDDGE
        +E    E++DGE
Subjt:  KENKSYEKDDGE

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAATACAAACATTAAATTTACCATAGCTCTATCTGCTCAAACTTTTGGGTTCAATCGCAATGGAACTTCAAACCATTTCAAGATTGTTCGACGGATCAATACAGAGAG
ATACACGGCAAAGCGGGCAGCTCGAGTGCGAACGGAGCCACCGGTCCACGCACTCAGAATGGTAACAATGACGGCATGGCGGCAGAATCTTCACCTTCTCCCCATCTTCA
AACACGCCCAAGCAAATGGAACACTCCCCTGCATCGCTTGCGGCCGCGGGCGGATCCTCTTCCGCAGCCGGTGCCTTATACAGAGTGATCGGAAGGGAGTTAATCGCCGT
GGCGCCGAGCCCCTGCTGCTGCGGCGGCGACCTCGGCTGCCGGCGGACGGGAAGGGAGGCGGAAAAGGTGGTGAGTTGGTGGAATCGGCAGACCCAACGGGCGTAAAGGA
AAATAAAAGTTACGAGAAGGATGACGGCGAATAA
mRNA sequenceShow/hide mRNA sequence
TACTATATATAATCCTATGGCTTTTGAATTTAGTAATAATTGTATACAATATCAAAGAAGACTATATGGATCTAAAAACCAATGTTATTTTCATTCTAATTACTTGATGT
GAACTTGACCTAATTAACCAAATTCACAAGAGGGGAAGATGGTAACAAATTCATGAATACAAACATTAAATTTACCATAGCTCTATCTGCTCAAACTTTTGGGTTCAATC
GCAATGGAACTTCAAACCATTTCAAGATTGTTCGACGGATCAATACAGAGAGATACACGGCAAAGCGGGCAGCTCGAGTGCGAACGGAGCCACCGGTCCACGCACTCAGA
ATGGTAACAATGACGGCATGGCGGCAGAATCTTCACCTTCTCCCCATCTTCAAACACGCCCAAGCAAATGGAACACTCCCCTGCATCGCTTGCGGCCGCGGGCGGATCCT
CTTCCGCAGCCGGTGCCTTATACAGAGTGATCGGAAGGGAGTTAATCGCCGTGGCGCCGAGCCCCTGCTGCTGCGGCGGCGACCTCGGCTGCCGGCGGACGGGAAGGGAG
GCGGAAAAGGTGGTGAGTTGGTGGAATCGGCAGACCCAACGGGCGTAAAGGAAAATAAAAGTTACGAGAAGGATGACGGCGAATAAAAACGGCGACAAAGAAAAAAGTTC
GGCCGCGGATTTGGAAGAGGCGATCGTCGAGCTCCGTGAAGTGCCAGGGGACGGACGGAGGGACTTGAGATGTGGCCATTTCGAGCTGATGCTCATCAATCGGAGGGTAG
CGAGAGAATTCCGTGGGCTTCGAAACGGTCGTCGGAGAATCGCGGGAGCAACGGTGGAAAGGGGGAAAGGTTTTGGGGTTTTGGAAACAGCGTTGGATTTTATTTTATTT
TATTTTTCTCTTCTCTTCTTTTCTTTTTT
Protein sequenceShow/hide protein sequence
MNTNIKFTIALSAQTFGFNRNGTSNHFKIVRRINTERYTAKRAARVRTEPPVHALRMVTMTAWRQNLHLLPIFKHAQANGTLPCIACGRGRILFRSRCLIQSDRKGVNRR
GAEPLLLRRRPRLPADGKGGGKGGELVESADPTGVKENKSYEKDDGE