| GenBank top hits | e value | %identity | Alignment |
|---|
| KAA0026233.1 gag/pol protein [Cucumis melo var. makuwa] | 0.0 | 74.35 | Show/hide |
Query: QVPTANATRTVREAYERWAKANEKARAYILASLSEVLTKKHESMLTAREIMDSLQEI-------------------------------------------
QVP ANATRTVRE YERWAKANEKARAYILASLSEVL KKHESMLTAREIMDSLQE+
Subjt: QVPTANATRTVREAYERWAKANEKARAYILASLSEVLTKKHESMLTAREIMDSLQEI-------------------------------------------
Query: ------------------------------------------------------------------------GSTSGTKSVPSSSGNKKWKKKKGGQGNK
GSTSGTKS+PSSSGNKKWKKKKGGQGNK
Subjt: ------------------------------------------------------------------------GSTSGTKSVPSSSGNKKWKKKKGGQGNK
Query: ANPATAKTRKKAKAAKGICFHCNQEGHWKRNCPKYLAEKKKAKQEWASKRVRRNSLPVCESCLEGKMTKRPFTGKGHISKEPLELVHSDLCGPMNAKARG
AN A AKT KKAKAAKGICF CNQEGHWKRNCPKYLA+KKKAKQ GKMTKRPFTGKGH +KEPLELVHSDLCGPMN KARG
Subjt: ANPATAKTRKKAKAAKGICFHCNQEGHWKRNCPKYLAEKKKAKQEWASKRVRRNSLPVCESCLEGKMTKRPFTGKGHISKEPLELVHSDLCGPMNAKARG
Query: GFEYFITFTDDYSRYGYVYLMQHKSEALEKFKEYKAEVENKLSKTIKTFRSDRGGEYMDLKFQNYLMECEIVSQLSAPGTPQQNGVLERRNRTLLDMVWS
GFEYFITFTDDYSRYGYVYLMQHKSEALEKFKEYKAEVEN LSKTIKTFRSDRGGEYMDLKFQNYLMEC IVSQLSAP TPQQNGV ERRNRTLLDMV S
Subjt: GFEYFITFTDDYSRYGYVYLMQHKSEALEKFKEYKAEVENKLSKTIKTFRSDRGGEYMDLKFQNYLMECEIVSQLSAPGTPQQNGVLERRNRTLLDMVWS
Query: MMSYAHLPNSFRGYAVQATVYILNCVPSKSISEIPLKLWIGHKGSLRHFRIWGCQAHVLETNPKKLEPRSKLCLFVGYPKGTRDGYFYGLKDNKVFVSTN
MMSYAHLPNSF GYAVQ VYILNCVPSKS+SE PLKLW GHKGSLRHFRIWGC AHVLE NPKKLEPRSKLCLFVGYPKGTR GYFY KDNKVFVSTN
Subjt: MMSYAHLPNSFRGYAVQATVYILNCVPSKSISEIPLKLWIGHKGSLRHFRIWGCQAHVLETNPKKLEPRSKLCLFVGYPKGTRDGYFYGLKDNKVFVSTN
Query: ATFLEEDHIREYKPRSKIVLNELSNESTELSTRVVEEPSTLARVVHVSSSIRIRQPKSLGEPRRSGRVTNLPIHYMSLTETLTVISDGNIGDPLTFKKAM
ATFLEEDHIRE+KPRSKIVLNELS E+TE STRVVEEPS L RVVHV SS R QP+SL EPRRSGRVTNLPI YMSLTETLTVISDG+I DPLTFKKAM
Subjt: ATFLEEDHIREYKPRSKIVLNELSNESTELSTRVVEEPSTLARVVHVSSSIRIRQPKSLGEPRRSGRVTNLPIHYMSLTETLTVISDGNIGDPLTFKKAM
Query: EDVDKDEWIKAMNLELESMYFNLVWDLVDQPDGVKPIGCKWIYKRKRGADGKVQTFKARLVAKGYTQVEGVDYEKIFSSVAMLKSIRILLSIAAYFDYEI
EDVDKDEWIKAMNLELESMYFN VWDLVDQPDGVKPIGCKWIYKRKRGADGKVQTFKARLVAKGYTQVEGVDYE+ FS VAMLKSIRILLSIAAYFDYEI
Subjt: EDVDKDEWIKAMNLELESMYFNLVWDLVDQPDGVKPIGCKWIYKRKRGADGKVQTFKARLVAKGYTQVEGVDYEKIFSSVAMLKSIRILLSIAAYFDYEI
Query: WQMYVKTTILNDNLEETIYMQQPEGFIIP
WQM VKT LN NLEETIYMQQPEGFIIP
Subjt: WQMYVKTTILNDNLEETIYMQQPEGFIIP
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| KAA0034863.1 gag/pol protein [Cucumis melo var. makuwa] | 0.0 | 86.89 | Show/hide |
Query: SRVKEYLQVPTANATRTVREAYERWAKANEKARAYILASLSEVLTKKHESMLTA---RE---------------------------IMDSLQEI------
S VKEYLQVPTANATRTVREAYERWAKANEKARAYILASLSEVLTKKHESMLTA RE I++SL E
Subjt: SRVKEYLQVPTANATRTVREAYERWAKANEKARAYILASLSEVLTKKHESMLTA---RE---------------------------IMDSLQEI------
Query: ---------GSTSGTKSVPSSSGNKKWKKKKGGQGNKANPATAKTRKKAKAAKGICFHCNQEGHWKRNCPKYLAEKKKAKQEWASKRVR-----------
GSTSGTKSVPSSSGNKKWKKKKGGQGNKANPATAKTRKKAKAAKGICFHCNQEGHWKRNCPKYLAEKKKAKQ +KR+
Subjt: ---------GSTSGTKSVPSSSGNKKWKKKKGGQGNKANPATAKTRKKAKAAKGICFHCNQEGHWKRNCPKYLAEKKKAKQEWASKRVR-----------
Query: ------------------------RNSLPVCESCLEGKMTKRPFTGKGHISKEPLELVHSDLCGPMNAKARGGFEYFITFTDDYSRYGYVYLMQHKSEAL
NSLPVCESCLEGKMTKRPFTGKGHISKEPLELVHSDLCGPMNAKARGGFEYFITFTDDYSRYGYVYLMQHKSEAL
Subjt: ------------------------RNSLPVCESCLEGKMTKRPFTGKGHISKEPLELVHSDLCGPMNAKARGGFEYFITFTDDYSRYGYVYLMQHKSEAL
Query: EKFKEYKAEVENKLSKTIKTFRSDRGGEYMDLKFQNYLMECEIVSQLSAPGTPQQNGVLERRNRTLLDMVWSMMSYAHLPNSFRGYAVQATVYILNCVPS
EKFKEYKAEVENKLSKTIKTFRSDRGGEYMDLKFQNYLMECEIVSQLSAPGTPQQNGVLERRNRTLLDMVWSMMSYAHLPNSFRGYAVQATVYILNCVPS
Subjt: EKFKEYKAEVENKLSKTIKTFRSDRGGEYMDLKFQNYLMECEIVSQLSAPGTPQQNGVLERRNRTLLDMVWSMMSYAHLPNSFRGYAVQATVYILNCVPS
Query: KSISEIPLKLWIGHKGSLRHFRIWGCQAHVLETNPKKLEPRSKLCLFVGYPKGTRDGYFYGLKDNKVFVSTNATFLEEDHIREYKPRSKIVLNELSNEST
KSISEIPLKLWIGHKGSLRHFRIWGCQAHVLETNPKKLEPRSKLCLFVGYPKGTRDGYFYGLKDNKVFVSTNATFLEEDHIREYKPRSKIVLNELSNEST
Subjt: KSISEIPLKLWIGHKGSLRHFRIWGCQAHVLETNPKKLEPRSKLCLFVGYPKGTRDGYFYGLKDNKVFVSTNATFLEEDHIREYKPRSKIVLNELSNEST
Query: ELSTRVVEEPSTLARVVHVSSSIRIRQPKSLGEPRRSGRVTNLPIHYMSLTETLTVISDGNIGDPLTFKKAMEDVDKDEWIKAMNLELESMYFNLVWDLV
ELSTRVVEEPSTLARVVHVSSSIRIRQPKSLGEPRRSGRVTNLPIHYMSLTETLTVISDGNIGDPLTFKKAMEDVDKDEWIKAMNLELESMYFNLVWDLV
Subjt: ELSTRVVEEPSTLARVVHVSSSIRIRQPKSLGEPRRSGRVTNLPIHYMSLTETLTVISDGNIGDPLTFKKAMEDVDKDEWIKAMNLELESMYFNLVWDLV
Query: DQPDGVKPIGCKWIYKRKRGADGKVQTFKARLVAKGYTQVEGVDYEKIFSSVAMLKSIRILLSIAAYFDYEIWQMYVKTTILNDNLEETIYMQQPEGFII
DQPDGVKPIGCKWIYKRKRGADGKVQTFKARLVAKGYTQVEGVDYEKIFSSVAMLKSIRILLSIAAYFDYEIWQMYVKTTILNDNLEETIYMQQPEGFII
Subjt: DQPDGVKPIGCKWIYKRKRGADGKVQTFKARLVAKGYTQVEGVDYEKIFSSVAMLKSIRILLSIAAYFDYEIWQMYVKTTILNDNLEETIYMQQPEGFII
Query: PC
PC
Subjt: PC
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| KAA0062993.1 gag/pol protein [Cucumis melo var. makuwa] | 0.0 | 61.18 | Show/hide |
Query: VKEYLQVPTANATRTVREAYERWAKANEKARAYILASLSEVLTKKHESMLTAREIMDSLQEI--------------------------------------
VKE QVP ANATRTVRE YERWAKANEKARAYILASLSEVL KKHESMLTAREIMDSLQE+
Subjt: VKEYLQVPTANATRTVREAYERWAKANEKARAYILASLSEVLTKKHESMLTAREIMDSLQEI--------------------------------------
Query: -----------------------------------------------------------------------------GSTSGTKSVPSSSGNKKWKKKKG
GSTSGTKS+PSSSGNKKWKKKKG
Subjt: -----------------------------------------------------------------------------GSTSGTKSVPSSSGNKKWKKKKG
Query: GQGNKANPATAKTRKKAKAAKGICFHCNQEGHWKRNCPKYLAEKKKAKQ--------------------------------------EWA----------
GQGNKAN A AKT KKAKAAKGICFHCNQEGHWKRNCPKYLAEKKKAKQ W
Subjt: GQGNKANPATAKTRKKAKAAKGICFHCNQEGHWKRNCPKYLAEKKKAKQ--------------------------------------EWA----------
Query: ----------------------------------------------------------------------------------------------------
Subjt: ----------------------------------------------------------------------------------------------------
Query: SKRVR-----------------------------------RNSLPVCESCLEGKMTKRPFTGKGHISKEPLELVHSDLCGPMNAKARGGFEYFITFTDDY
+KR++ NSLPVCESCLEGKMTKRPFTGKGH +KEPLELVHSDLCGPMN KARGGFEYFITFTDDY
Subjt: SKRVR-----------------------------------RNSLPVCESCLEGKMTKRPFTGKGHISKEPLELVHSDLCGPMNAKARGGFEYFITFTDDY
Query: SRYGYVYLMQHKSEALEKFKEYKAEVENKLSKTIKTFRSDRGGEYMDLKFQNYLMECEIVSQLSAPGTPQQNGVLERRNRTLLDMVWSMMSYAHLPNSFR
SRYGYVYLMQHKSEALEKFKEYKAEVEN LSKTIKTFRSDRGGEYMDLKFQNYLMEC IVSQLSAPGTPQQNGV ERRNRTLLDMV SMMSYAHLPNSF
Subjt: SRYGYVYLMQHKSEALEKFKEYKAEVENKLSKTIKTFRSDRGGEYMDLKFQNYLMECEIVSQLSAPGTPQQNGVLERRNRTLLDMVWSMMSYAHLPNSFR
Query: GYAVQATVYILNCVPSKSISEIPLKLWIGHKGSLRHFRIWGCQAHVLETNPKKLEPRSKLCLFVGYPKGTRDGYFYGLKDNKVFVSTNATFLEEDHIREY
GYAVQ VYILNCVPSKS+SE PLKLW G KGSLRHFRIWGC AHVLE NPKKLEPRSKLCLFVGYPKGTR GYFY KDNKVFVSTNATFLEEDHIRE+
Subjt: GYAVQATVYILNCVPSKSISEIPLKLWIGHKGSLRHFRIWGCQAHVLETNPKKLEPRSKLCLFVGYPKGTRDGYFYGLKDNKVFVSTNATFLEEDHIREY
Query: KPRSKIVLNELSNESTELSTRVVEEPSTLARVVHVSSSIRIRQPKSLGEPRRSGRVTNLPIHYMSLTETLTVISDGNIGDPLTFKKAMEDVDKDEWIKAM
KPRSKIVLNELS E+TE STRVVEEPS L RVVHV SS R QP+SL EPRRSGRVTNLPI YMSLTETLTVISDG+I DPLTFKKAMEDVDKDEWIKAM
Subjt: KPRSKIVLNELSNESTELSTRVVEEPSTLARVVHVSSSIRIRQPKSLGEPRRSGRVTNLPIHYMSLTETLTVISDGNIGDPLTFKKAMEDVDKDEWIKAM
Query: NLELESMYFNLVWDLVDQPDGVKPIGCKWIYKRKRGADGKVQTFKARLVAKGYTQVEGVDYEKIFSSVAMLKSIRILLSIAAYFDYEIWQMYVKTTILND
NLELESMYFN VWDLVDQPDGVKPIGCKWIYKRKRGADGKVQTFKARLVAKGYTQVEGVDYE+ FS VAMLKSIRILLSIAAYFDYEIWQM VKT LN
Subjt: NLELESMYFNLVWDLVDQPDGVKPIGCKWIYKRKRGADGKVQTFKARLVAKGYTQVEGVDYEKIFSSVAMLKSIRILLSIAAYFDYEIWQMYVKTTILND
Query: NLEETIYMQQPEGFIIP
NLEETIYMQQPEGFIIP
Subjt: NLEETIYMQQPEGFIIP
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| TYJ96675.1 gag/pol protein [Cucumis melo var. makuwa] | 0.0 | 86.89 | Show/hide |
Query: SRVKEYLQVPTANATRTVREAYERWAKANEKARAYILASLSEVLTKKHESMLTA---RE---------------------------IMDSLQEI------
S VKEYLQVPTANATRTVREAYERWAKANEKARAYILASLSEVLTKKHESMLTA RE I++SL E
Subjt: SRVKEYLQVPTANATRTVREAYERWAKANEKARAYILASLSEVLTKKHESMLTA---RE---------------------------IMDSLQEI------
Query: ---------GSTSGTKSVPSSSGNKKWKKKKGGQGNKANPATAKTRKKAKAAKGICFHCNQEGHWKRNCPKYLAEKKKAKQEWASKRVR-----------
GSTSGTKSVPSSSGNKKWKKKKGGQGNKANPATAKTRKKAKAAKGICFHCNQEGHWKRNCPKYLAEKKKAKQ +KR+
Subjt: ---------GSTSGTKSVPSSSGNKKWKKKKGGQGNKANPATAKTRKKAKAAKGICFHCNQEGHWKRNCPKYLAEKKKAKQEWASKRVR-----------
Query: ------------------------RNSLPVCESCLEGKMTKRPFTGKGHISKEPLELVHSDLCGPMNAKARGGFEYFITFTDDYSRYGYVYLMQHKSEAL
NSLPVCESCLEGKMTKRPFTGKGHISKEPLELVHSDLCGPMNAKARGGFEYFITFTDDYSRYGYVYLMQHKSEAL
Subjt: ------------------------RNSLPVCESCLEGKMTKRPFTGKGHISKEPLELVHSDLCGPMNAKARGGFEYFITFTDDYSRYGYVYLMQHKSEAL
Query: EKFKEYKAEVENKLSKTIKTFRSDRGGEYMDLKFQNYLMECEIVSQLSAPGTPQQNGVLERRNRTLLDMVWSMMSYAHLPNSFRGYAVQATVYILNCVPS
EKFKEYKAEVENKLSKTIKTFRSDRGGEYMDLKFQNYLMECEIVSQLSAPGTPQQNGVLERRNRTLLDMVWSMMSYAHLPNSFRGYAVQATVYILNCVPS
Subjt: EKFKEYKAEVENKLSKTIKTFRSDRGGEYMDLKFQNYLMECEIVSQLSAPGTPQQNGVLERRNRTLLDMVWSMMSYAHLPNSFRGYAVQATVYILNCVPS
Query: KSISEIPLKLWIGHKGSLRHFRIWGCQAHVLETNPKKLEPRSKLCLFVGYPKGTRDGYFYGLKDNKVFVSTNATFLEEDHIREYKPRSKIVLNELSNEST
KSISEIPLKLWIGHKGSLRHFRIWGCQAHVLETNPKKLEPRSKLCLFVGYPKGTRDGYFYGLKDNKVFVSTNATFLEEDHIREYKPRSKIVLNELSNEST
Subjt: KSISEIPLKLWIGHKGSLRHFRIWGCQAHVLETNPKKLEPRSKLCLFVGYPKGTRDGYFYGLKDNKVFVSTNATFLEEDHIREYKPRSKIVLNELSNEST
Query: ELSTRVVEEPSTLARVVHVSSSIRIRQPKSLGEPRRSGRVTNLPIHYMSLTETLTVISDGNIGDPLTFKKAMEDVDKDEWIKAMNLELESMYFNLVWDLV
ELSTRVVEEPSTLARVVHVSSSIRIRQPKSLGEPRRSGRVTNLPIHYMSLTETLTVISDGNIGDPLTFKKAMEDVDKDEWIKAMNLELESMYFNLVWDLV
Subjt: ELSTRVVEEPSTLARVVHVSSSIRIRQPKSLGEPRRSGRVTNLPIHYMSLTETLTVISDGNIGDPLTFKKAMEDVDKDEWIKAMNLELESMYFNLVWDLV
Query: DQPDGVKPIGCKWIYKRKRGADGKVQTFKARLVAKGYTQVEGVDYEKIFSSVAMLKSIRILLSIAAYFDYEIWQMYVKTTILNDNLEETIYMQQPEGFII
DQPDGVKPIGCKWIYKRKRGADGKVQTFKARLVAKGYTQVEGVDYEKIFSSVAMLKSIRILLSIAAYFDYEIWQMYVKTTILNDNLEETIYMQQPEGFII
Subjt: DQPDGVKPIGCKWIYKRKRGADGKVQTFKARLVAKGYTQVEGVDYEKIFSSVAMLKSIRILLSIAAYFDYEIWQMYVKTTILNDNLEETIYMQQPEGFII
Query: PC
PC
Subjt: PC
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| TYJ97618.1 gag/pol protein [Cucumis melo var. makuwa] | 0.0 | 78.35 | Show/hide |
Query: VKEYLQVPTANATRTVREAYERWAKANEKARAYILASLSEVLTKKHESMLTAREIMDSLQEI--------------------------------------
V+E QVP ANAT+TVRE YERWAK NEK RAYILASLSEVL KKHESMLTAREIMDSLQE+
Subjt: VKEYLQVPTANATRTVREAYERWAKANEKARAYILASLSEVLTKKHESMLTAREIMDSLQEI--------------------------------------
Query: --------------------------------GSTSGTKSVPSSSGNKKWKKKKGGQGNKANPATAKTRKKAKAAKGICFHCNQEGHWKRNCPKYLAEKK
GSTSGTKS+PSSSGNKKWKKKKGGQGNKAN A AKT KK+KA KGICFH NQEGHWKRNCPKYLAEKK
Subjt: --------------------------------GSTSGTKSVPSSSGNKKWKKKKGGQGNKANPATAKTRKKAKAAKGICFHCNQEGHWKRNCPKYLAEKK
Query: KAKQEWAS-KRVRR------------NSLPVCESCLEGKMTKRPFTGKGHISKEPLELVHSDLCGPMNAKARGGFEYFITFTDDYSRYGYVYLMQHKSEA
KAKQ + R+ R NSLP+CESCLEGKMTKRPFTGKGH +KEPLELVHSDLCGPMN KARG FEYFITFTDDYSRYGYVYLMQHKSEA
Subjt: KAKQEWAS-KRVRR------------NSLPVCESCLEGKMTKRPFTGKGHISKEPLELVHSDLCGPMNAKARGGFEYFITFTDDYSRYGYVYLMQHKSEA
Query: LEKFKEYKAEVENKLSKTIKTFRSDRGGEYMDLKFQNYLMECEIVSQLSAPGTPQQNGVLERRNRTLLDMVWSMMSYAHLPNSFRGYAVQATVYILNCVP
LEKFKEYKAEVEN LSKTIKTFRSDRGGEYMDLKFQNYLMECEI+SQLSAPGTPQQNGV ERRNRTLLDMV SM+SYAHLPNSF GYAVQ VYILNCVP
Subjt: LEKFKEYKAEVENKLSKTIKTFRSDRGGEYMDLKFQNYLMECEIVSQLSAPGTPQQNGVLERRNRTLLDMVWSMMSYAHLPNSFRGYAVQATVYILNCVP
Query: SKSISEIPLKLWIGHKGSLRHFRIWGCQAHVLETNPKKLEPRSKLCLFVGYPKGTRDGYFYGLKDNKVFVSTNATFLEEDHIREYKPRSKIVLNELSNES
SKS+SE PLKLW G KGSLRHFRIWGC AHVLE NPKKLEPRSKLCLFVGYPKGTR GYFY KDNKVFVSTNATFLEEDHIRE+KPRSKIVLNELS E+
Subjt: SKSISEIPLKLWIGHKGSLRHFRIWGCQAHVLETNPKKLEPRSKLCLFVGYPKGTRDGYFYGLKDNKVFVSTNATFLEEDHIREYKPRSKIVLNELSNES
Query: TELSTRVVEEPSTLARVVHVSSSIRIRQPKSLGEPRRSGRVTNLPIHYMSLTETLTVISDGNIGDPLTFKKAMEDVDKDEWIKAMNLELESMYFNLVWDL
TE STRVVEEPS L RVVHV SS R QP+SL EPRRSGRVTNLPI YMSLTETLTVISDG+I DPLTFKKAMEDVDKDEWIKAMNLELESMYFN VWDL
Subjt: TELSTRVVEEPSTLARVVHVSSSIRIRQPKSLGEPRRSGRVTNLPIHYMSLTETLTVISDGNIGDPLTFKKAMEDVDKDEWIKAMNLELESMYFNLVWDL
Query: VDQPDGVKPIGCKWIYKRKRGADGKVQTFKARLVAKGYTQVEGVDYEKIFSSVAMLKSIRILLSIAAYFDYEIWQMYVKTTILNDNLEETIYMQQPEGFI
VDQPDGVKPIGCKWIYKRKRGADGKVQTFKARLVAKGYTQVEGVDYE+ FS VAMLKSIRILLSIAAYFDYEIWQM VKT LN NLEETIYMQQPEGFI
Subjt: VDQPDGVKPIGCKWIYKRKRGADGKVQTFKARLVAKGYTQVEGVDYEKIFSSVAMLKSIRILLSIAAYFDYEIWQMYVKTTILNDNLEETIYMQQPEGFI
Query: IP
IP
Subjt: IP
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| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A5A7SNP8 Gag/pol protein | 5.8e-294 | 73.98 | Show/hide |
Query: VKEYLQVPTANATRTVREAYERWAKANEKARAYILASLSEVLTKKHESMLTAREIMDSLQEI--------------------------------------
V++ QVP ANATRTVRE YERWAKANEKARAYILASLSEVL KKHESMLTAREIMDSLQE+
Subjt: VKEYLQVPTANATRTVREAYERWAKANEKARAYILASLSEVLTKKHESMLTAREIMDSLQEI--------------------------------------
Query: -----------------------------------------------------------------------------GSTSGTKSVPSSSGNKKWKKKKG
GSTSGTKS+PSSSGNKKWKKKKG
Subjt: -----------------------------------------------------------------------------GSTSGTKSVPSSSGNKKWKKKKG
Query: GQGNKANPATAKTRKKAKAAKGICFHCNQEGHWKRNCPKYLAEKKKAKQEWASKRVRRNSLPVCESCLEGKMTKRPFTGKGHISKEPLELVHSDLCGPMN
GQGNKAN A AKT KKAKAAKGICF CNQEGHWKRNCPKYLA+KKKAKQ GKMTKRPFTGKGH +KEPLELVHSDLCGPMN
Subjt: GQGNKANPATAKTRKKAKAAKGICFHCNQEGHWKRNCPKYLAEKKKAKQEWASKRVRRNSLPVCESCLEGKMTKRPFTGKGHISKEPLELVHSDLCGPMN
Query: AKARGGFEYFITFTDDYSRYGYVYLMQHKSEALEKFKEYKAEVENKLSKTIKTFRSDRGGEYMDLKFQNYLMECEIVSQLSAPGTPQQNGVLERRNRTLL
KARGGFEYFITFTDDYSRYGYVYLMQHKSEALEKFKEYKAEVEN LSKTIKTFRSDRGGEYMDLKFQNYLMEC IVSQLSAP TPQQNGV ERRNRTLL
Subjt: AKARGGFEYFITFTDDYSRYGYVYLMQHKSEALEKFKEYKAEVENKLSKTIKTFRSDRGGEYMDLKFQNYLMECEIVSQLSAPGTPQQNGVLERRNRTLL
Query: DMVWSMMSYAHLPNSFRGYAVQATVYILNCVPSKSISEIPLKLWIGHKGSLRHFRIWGCQAHVLETNPKKLEPRSKLCLFVGYPKGTRDGYFYGLKDNKV
DMV SMMSYAHLPNSF GYAVQ VYILNCVPSKS+SE PLKLW GHKGSLRHFRIWGC AHVLE NPKKLEPRSKLCLFVGYPKGTR GYFY KDNKV
Subjt: DMVWSMMSYAHLPNSFRGYAVQATVYILNCVPSKSISEIPLKLWIGHKGSLRHFRIWGCQAHVLETNPKKLEPRSKLCLFVGYPKGTRDGYFYGLKDNKV
Query: FVSTNATFLEEDHIREYKPRSKIVLNELSNESTELSTRVVEEPSTLARVVHVSSSIRIRQPKSLGEPRRSGRVTNLPIHYMSLTETLTVISDGNIGDPLT
FVSTNATFLEEDHIRE+KPRSKIVLNELS E+TE STRVVEEPS L RVVHV SS R QP+SL EPRRSGRVTNLPI YMSLTETLTVISDG+I DPLT
Subjt: FVSTNATFLEEDHIREYKPRSKIVLNELSNESTELSTRVVEEPSTLARVVHVSSSIRIRQPKSLGEPRRSGRVTNLPIHYMSLTETLTVISDGNIGDPLT
Query: FKKAMEDVDKDEWIKAMNLELESMYFNLVWDLVDQPDGVKPIGCKWIYKRKRGADGKVQTFKARLVAKGYTQVEGVDYEKIFSSVAMLKSIRILLSIAAY
FKKAMEDVDKDEWIKAMNLELESMYFN VWDLVDQPDGVKPIGCKWIYKRKRGADGKVQTFKARLVAKGYTQVEGVDYE+ FS VAMLKSIRILLSIAAY
Subjt: FKKAMEDVDKDEWIKAMNLELESMYFNLVWDLVDQPDGVKPIGCKWIYKRKRGADGKVQTFKARLVAKGYTQVEGVDYEKIFSSVAMLKSIRILLSIAAY
Query: FDYEIWQMYVKTTILNDNLEETIYMQQPEGFIIP
FDYEIWQM VKT LN NLEETIYMQQPEGFIIP
Subjt: FDYEIWQMYVKTTILNDNLEETIYMQQPEGFIIP
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| A0A5A7SWF4 Gag/pol protein | 0.0e+00 | 86.89 | Show/hide |
Query: SRVKEYLQVPTANATRTVREAYERWAKANEKARAYILASLSEVLTKKHESMLTA---RE---------------------------IMDSLQEI------
S VKEYLQVPTANATRTVREAYERWAKANEKARAYILASLSEVLTKKHESMLTA RE I++SL E
Subjt: SRVKEYLQVPTANATRTVREAYERWAKANEKARAYILASLSEVLTKKHESMLTA---RE---------------------------IMDSLQEI------
Query: ---------GSTSGTKSVPSSSGNKKWKKKKGGQGNKANPATAKTRKKAKAAKGICFHCNQEGHWKRNCPKYLAEKKKAKQEWASKR-------------
GSTSGTKSVPSSSGNKKWKKKKGGQGNKANPATAKTRKKAKAAKGICFHCNQEGHWKRNCPKYLAEKKKAKQ +KR
Subjt: ---------GSTSGTKSVPSSSGNKKWKKKKGGQGNKANPATAKTRKKAKAAKGICFHCNQEGHWKRNCPKYLAEKKKAKQEWASKR-------------
Query: ----------------------VRRNSLPVCESCLEGKMTKRPFTGKGHISKEPLELVHSDLCGPMNAKARGGFEYFITFTDDYSRYGYVYLMQHKSEAL
+ NSLPVCESCLEGKMTKRPFTGKGHISKEPLELVHSDLCGPMNAKARGGFEYFITFTDDYSRYGYVYLMQHKSEAL
Subjt: ----------------------VRRNSLPVCESCLEGKMTKRPFTGKGHISKEPLELVHSDLCGPMNAKARGGFEYFITFTDDYSRYGYVYLMQHKSEAL
Query: EKFKEYKAEVENKLSKTIKTFRSDRGGEYMDLKFQNYLMECEIVSQLSAPGTPQQNGVLERRNRTLLDMVWSMMSYAHLPNSFRGYAVQATVYILNCVPS
EKFKEYKAEVENKLSKTIKTFRSDRGGEYMDLKFQNYLMECEIVSQLSAPGTPQQNGVLERRNRTLLDMVWSMMSYAHLPNSFRGYAVQATVYILNCVPS
Subjt: EKFKEYKAEVENKLSKTIKTFRSDRGGEYMDLKFQNYLMECEIVSQLSAPGTPQQNGVLERRNRTLLDMVWSMMSYAHLPNSFRGYAVQATVYILNCVPS
Query: KSISEIPLKLWIGHKGSLRHFRIWGCQAHVLETNPKKLEPRSKLCLFVGYPKGTRDGYFYGLKDNKVFVSTNATFLEEDHIREYKPRSKIVLNELSNEST
KSISEIPLKLWIGHKGSLRHFRIWGCQAHVLETNPKKLEPRSKLCLFVGYPKGTRDGYFYGLKDNKVFVSTNATFLEEDHIREYKPRSKIVLNELSNEST
Subjt: KSISEIPLKLWIGHKGSLRHFRIWGCQAHVLETNPKKLEPRSKLCLFVGYPKGTRDGYFYGLKDNKVFVSTNATFLEEDHIREYKPRSKIVLNELSNEST
Query: ELSTRVVEEPSTLARVVHVSSSIRIRQPKSLGEPRRSGRVTNLPIHYMSLTETLTVISDGNIGDPLTFKKAMEDVDKDEWIKAMNLELESMYFNLVWDLV
ELSTRVVEEPSTLARVVHVSSSIRIRQPKSLGEPRRSGRVTNLPIHYMSLTETLTVISDGNIGDPLTFKKAMEDVDKDEWIKAMNLELESMYFNLVWDLV
Subjt: ELSTRVVEEPSTLARVVHVSSSIRIRQPKSLGEPRRSGRVTNLPIHYMSLTETLTVISDGNIGDPLTFKKAMEDVDKDEWIKAMNLELESMYFNLVWDLV
Query: DQPDGVKPIGCKWIYKRKRGADGKVQTFKARLVAKGYTQVEGVDYEKIFSSVAMLKSIRILLSIAAYFDYEIWQMYVKTTILNDNLEETIYMQQPEGFII
DQPDGVKPIGCKWIYKRKRGADGKVQTFKARLVAKGYTQVEGVDYEKIFSSVAMLKSIRILLSIAAYFDYEIWQMYVKTTILNDNLEETIYMQQPEGFII
Subjt: DQPDGVKPIGCKWIYKRKRGADGKVQTFKARLVAKGYTQVEGVDYEKIFSSVAMLKSIRILLSIAAYFDYEIWQMYVKTTILNDNLEETIYMQQPEGFII
Query: PC
PC
Subjt: PC
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| A0A5A7V4M1 Gag/pol protein | 8.4e-285 | 61.18 | Show/hide |
Query: VKEYLQVPTANATRTVREAYERWAKANEKARAYILASLSEVLTKKHESMLTAREIMDSLQEI--------------------------------------
VKE QVP ANATRTVRE YERWAKANEKARAYILASLSEVL KKHESMLTAREIMDSLQE+
Subjt: VKEYLQVPTANATRTVREAYERWAKANEKARAYILASLSEVLTKKHESMLTAREIMDSLQEI--------------------------------------
Query: -----------------------------------------------------------------------------GSTSGTKSVPSSSGNKKWKKKKG
GSTSGTKS+PSSSGNKKWKKKKG
Subjt: -----------------------------------------------------------------------------GSTSGTKSVPSSSGNKKWKKKKG
Query: GQGNKANPATAKTRKKAKAAKGICFHCNQEGHWKRNCPKYLAEKKKAKQ--------------------------------------EW-----------
GQGNKAN A AKT KKAKAAKGICFHCNQEGHWKRNCPKYLAEKKKAKQ W
Subjt: GQGNKANPATAKTRKKAKAAKGICFHCNQEGHWKRNCPKYLAEKKKAKQ--------------------------------------EW-----------
Query: ---------------------------------------------------------------------------------------------------A
Subjt: ---------------------------------------------------------------------------------------------------A
Query: SKRVR-----------------------------------RNSLPVCESCLEGKMTKRPFTGKGHISKEPLELVHSDLCGPMNAKARGGFEYFITFTDDY
+KR++ NSLPVCESCLEGKMTKRPFTGKGH +KEPLELVHSDLCGPMN KARGGFEYFITFTDDY
Subjt: SKRVR-----------------------------------RNSLPVCESCLEGKMTKRPFTGKGHISKEPLELVHSDLCGPMNAKARGGFEYFITFTDDY
Query: SRYGYVYLMQHKSEALEKFKEYKAEVENKLSKTIKTFRSDRGGEYMDLKFQNYLMECEIVSQLSAPGTPQQNGVLERRNRTLLDMVWSMMSYAHLPNSFR
SRYGYVYLMQHKSEALEKFKEYKAEVEN LSKTIKTFRSDRGGEYMDLKFQNYLMEC IVSQLSAPGTPQQNGV ERRNRTLLDMV SMMSYAHLPNSF
Subjt: SRYGYVYLMQHKSEALEKFKEYKAEVENKLSKTIKTFRSDRGGEYMDLKFQNYLMECEIVSQLSAPGTPQQNGVLERRNRTLLDMVWSMMSYAHLPNSFR
Query: GYAVQATVYILNCVPSKSISEIPLKLWIGHKGSLRHFRIWGCQAHVLETNPKKLEPRSKLCLFVGYPKGTRDGYFYGLKDNKVFVSTNATFLEEDHIREY
GYAVQ VYILNCVPSKS+SE PLKLW G KGSLRHFRIWGC AHVLE NPKKLEPRSKLCLFVGYPKGTR GYFY KDNKVFVSTNATFLEEDHIRE+
Subjt: GYAVQATVYILNCVPSKSISEIPLKLWIGHKGSLRHFRIWGCQAHVLETNPKKLEPRSKLCLFVGYPKGTRDGYFYGLKDNKVFVSTNATFLEEDHIREY
Query: KPRSKIVLNELSNESTELSTRVVEEPSTLARVVHVSSSIRIRQPKSLGEPRRSGRVTNLPIHYMSLTETLTVISDGNIGDPLTFKKAMEDVDKDEWIKAM
KPRSKIVLNELS E+TE STRVVEEPS L RVVHV SS R QP+SL EPRRSGRVTNLPI YMSLTETLTVISDG+I DPLTFKKAMEDVDKDEWIKAM
Subjt: KPRSKIVLNELSNESTELSTRVVEEPSTLARVVHVSSSIRIRQPKSLGEPRRSGRVTNLPIHYMSLTETLTVISDGNIGDPLTFKKAMEDVDKDEWIKAM
Query: NLELESMYFNLVWDLVDQPDGVKPIGCKWIYKRKRGADGKVQTFKARLVAKGYTQVEGVDYEKIFSSVAMLKSIRILLSIAAYFDYEIWQMYVKTTILND
NLELESMYFN VWDLVDQPDGVKPIGCKWIYKRKRGADGKVQTFKARLVAKGYTQVEGVDYE+ FS VAMLKSIRILLSIAAYFDYEIWQM VKT LN
Subjt: NLELESMYFNLVWDLVDQPDGVKPIGCKWIYKRKRGADGKVQTFKARLVAKGYTQVEGVDYEKIFSSVAMLKSIRILLSIAAYFDYEIWQMYVKTTILND
Query: NLEETIYMQQPEGFIIP
NLEETIYMQQPEGFIIP
Subjt: NLEETIYMQQPEGFIIP
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| A0A5D3BDY3 Gag/pol protein | 0.0e+00 | 86.89 | Show/hide |
Query: SRVKEYLQVPTANATRTVREAYERWAKANEKARAYILASLSEVLTKKHESMLTA---RE---------------------------IMDSLQEI------
S VKEYLQVPTANATRTVREAYERWAKANEKARAYILASLSEVLTKKHESMLTA RE I++SL E
Subjt: SRVKEYLQVPTANATRTVREAYERWAKANEKARAYILASLSEVLTKKHESMLTA---RE---------------------------IMDSLQEI------
Query: ---------GSTSGTKSVPSSSGNKKWKKKKGGQGNKANPATAKTRKKAKAAKGICFHCNQEGHWKRNCPKYLAEKKKAKQEWASKR-------------
GSTSGTKSVPSSSGNKKWKKKKGGQGNKANPATAKTRKKAKAAKGICFHCNQEGHWKRNCPKYLAEKKKAKQ +KR
Subjt: ---------GSTSGTKSVPSSSGNKKWKKKKGGQGNKANPATAKTRKKAKAAKGICFHCNQEGHWKRNCPKYLAEKKKAKQEWASKR-------------
Query: ----------------------VRRNSLPVCESCLEGKMTKRPFTGKGHISKEPLELVHSDLCGPMNAKARGGFEYFITFTDDYSRYGYVYLMQHKSEAL
+ NSLPVCESCLEGKMTKRPFTGKGHISKEPLELVHSDLCGPMNAKARGGFEYFITFTDDYSRYGYVYLMQHKSEAL
Subjt: ----------------------VRRNSLPVCESCLEGKMTKRPFTGKGHISKEPLELVHSDLCGPMNAKARGGFEYFITFTDDYSRYGYVYLMQHKSEAL
Query: EKFKEYKAEVENKLSKTIKTFRSDRGGEYMDLKFQNYLMECEIVSQLSAPGTPQQNGVLERRNRTLLDMVWSMMSYAHLPNSFRGYAVQATVYILNCVPS
EKFKEYKAEVENKLSKTIKTFRSDRGGEYMDLKFQNYLMECEIVSQLSAPGTPQQNGVLERRNRTLLDMVWSMMSYAHLPNSFRGYAVQATVYILNCVPS
Subjt: EKFKEYKAEVENKLSKTIKTFRSDRGGEYMDLKFQNYLMECEIVSQLSAPGTPQQNGVLERRNRTLLDMVWSMMSYAHLPNSFRGYAVQATVYILNCVPS
Query: KSISEIPLKLWIGHKGSLRHFRIWGCQAHVLETNPKKLEPRSKLCLFVGYPKGTRDGYFYGLKDNKVFVSTNATFLEEDHIREYKPRSKIVLNELSNEST
KSISEIPLKLWIGHKGSLRHFRIWGCQAHVLETNPKKLEPRSKLCLFVGYPKGTRDGYFYGLKDNKVFVSTNATFLEEDHIREYKPRSKIVLNELSNEST
Subjt: KSISEIPLKLWIGHKGSLRHFRIWGCQAHVLETNPKKLEPRSKLCLFVGYPKGTRDGYFYGLKDNKVFVSTNATFLEEDHIREYKPRSKIVLNELSNEST
Query: ELSTRVVEEPSTLARVVHVSSSIRIRQPKSLGEPRRSGRVTNLPIHYMSLTETLTVISDGNIGDPLTFKKAMEDVDKDEWIKAMNLELESMYFNLVWDLV
ELSTRVVEEPSTLARVVHVSSSIRIRQPKSLGEPRRSGRVTNLPIHYMSLTETLTVISDGNIGDPLTFKKAMEDVDKDEWIKAMNLELESMYFNLVWDLV
Subjt: ELSTRVVEEPSTLARVVHVSSSIRIRQPKSLGEPRRSGRVTNLPIHYMSLTETLTVISDGNIGDPLTFKKAMEDVDKDEWIKAMNLELESMYFNLVWDLV
Query: DQPDGVKPIGCKWIYKRKRGADGKVQTFKARLVAKGYTQVEGVDYEKIFSSVAMLKSIRILLSIAAYFDYEIWQMYVKTTILNDNLEETIYMQQPEGFII
DQPDGVKPIGCKWIYKRKRGADGKVQTFKARLVAKGYTQVEGVDYEKIFSSVAMLKSIRILLSIAAYFDYEIWQMYVKTTILNDNLEETIYMQQPEGFII
Subjt: DQPDGVKPIGCKWIYKRKRGADGKVQTFKARLVAKGYTQVEGVDYEKIFSSVAMLKSIRILLSIAAYFDYEIWQMYVKTTILNDNLEETIYMQQPEGFII
Query: PC
PC
Subjt: PC
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| A0A5D3BHG7 Gag/pol protein | 2.8e-304 | 78.35 | Show/hide |
Query: VKEYLQVPTANATRTVREAYERWAKANEKARAYILASLSEVLTKKHESMLTAREIMDSLQEI--------------------------------------
V+E QVP ANAT+TVRE YERWAK NEK RAYILASLSEVL KKHESMLTAREIMDSLQE+
Subjt: VKEYLQVPTANATRTVREAYERWAKANEKARAYILASLSEVLTKKHESMLTAREIMDSLQEI--------------------------------------
Query: --------------------------------GSTSGTKSVPSSSGNKKWKKKKGGQGNKANPATAKTRKKAKAAKGICFHCNQEGHWKRNCPKYLAEKK
GSTSGTKS+PSSSGNKKWKKKKGGQGNKAN A AKT KK+KA KGICFH NQEGHWKRNCPKYLAEKK
Subjt: --------------------------------GSTSGTKSVPSSSGNKKWKKKKGGQGNKANPATAKTRKKAKAAKGICFHCNQEGHWKRNCPKYLAEKK
Query: KAKQEWAS-KRVRR------------NSLPVCESCLEGKMTKRPFTGKGHISKEPLELVHSDLCGPMNAKARGGFEYFITFTDDYSRYGYVYLMQHKSEA
KAKQ + R+ R NSLP+CESCLEGKMTKRPFTGKGH +KEPLELVHSDLCGPMN KARG FEYFITFTDDYSRYGYVYLMQHKSEA
Subjt: KAKQEWAS-KRVRR------------NSLPVCESCLEGKMTKRPFTGKGHISKEPLELVHSDLCGPMNAKARGGFEYFITFTDDYSRYGYVYLMQHKSEA
Query: LEKFKEYKAEVENKLSKTIKTFRSDRGGEYMDLKFQNYLMECEIVSQLSAPGTPQQNGVLERRNRTLLDMVWSMMSYAHLPNSFRGYAVQATVYILNCVP
LEKFKEYKAEVEN LSKTIKTFRSDRGGEYMDLKFQNYLMECEI+SQLSAPGTPQQNGV ERRNRTLLDMV SM+SYAHLPNSF GYAVQ VYILNCVP
Subjt: LEKFKEYKAEVENKLSKTIKTFRSDRGGEYMDLKFQNYLMECEIVSQLSAPGTPQQNGVLERRNRTLLDMVWSMMSYAHLPNSFRGYAVQATVYILNCVP
Query: SKSISEIPLKLWIGHKGSLRHFRIWGCQAHVLETNPKKLEPRSKLCLFVGYPKGTRDGYFYGLKDNKVFVSTNATFLEEDHIREYKPRSKIVLNELSNES
SKS+SE PLKLW G KGSLRHFRIWGC AHVLE NPKKLEPRSKLCLFVGYPKGTR GYFY KDNKVFVSTNATFLEEDHIRE+KPRSKIVLNELS E+
Subjt: SKSISEIPLKLWIGHKGSLRHFRIWGCQAHVLETNPKKLEPRSKLCLFVGYPKGTRDGYFYGLKDNKVFVSTNATFLEEDHIREYKPRSKIVLNELSNES
Query: TELSTRVVEEPSTLARVVHVSSSIRIRQPKSLGEPRRSGRVTNLPIHYMSLTETLTVISDGNIGDPLTFKKAMEDVDKDEWIKAMNLELESMYFNLVWDL
TE STRVVEEPS L RVVHV SS R QP+SL EPRRSGRVTNLPI YMSLTETLTVISDG+I DPLTFKKAMEDVDKDEWIKAMNLELESMYFN VWDL
Subjt: TELSTRVVEEPSTLARVVHVSSSIRIRQPKSLGEPRRSGRVTNLPIHYMSLTETLTVISDGNIGDPLTFKKAMEDVDKDEWIKAMNLELESMYFNLVWDL
Query: VDQPDGVKPIGCKWIYKRKRGADGKVQTFKARLVAKGYTQVEGVDYEKIFSSVAMLKSIRILLSIAAYFDYEIWQMYVKTTILNDNLEETIYMQQPEGFI
VDQPDGVKPIGCKWIYKRKRGADGKVQTFKARLVAKGYTQVEGVDYE+ FS VAMLKSIRILLSIAAYFDYEIWQM VKT LN NLEETIYMQQPEGFI
Subjt: VDQPDGVKPIGCKWIYKRKRGADGKVQTFKARLVAKGYTQVEGVDYEKIFSSVAMLKSIRILLSIAAYFDYEIWQMYVKTTILNDNLEETIYMQQPEGFI
Query: IP
IP
Subjt: IP
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| SwissProt top hits | e value | %identity | Alignment |
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| P04146 Copia protein | 7.8e-54 | 27.87 | Show/hide |
Query: SLPVCESCLEGKMTKRPF---TGKGHISKEPLELVHSDLCGPMNAKARGGFEYFITFTDDYSRYGYVYLMQHKSEALEKFKEYKAEVENKLSKTIKTFRS
S +CE CL GK + PF K HI K PL +VHSD+CGP+ YF+ F D ++ Y YL+++KS+ F+++ A+ E + +
Subjt: SLPVCESCLEGKMTKRPF---TGKGHISKEPLELVHSDLCGPMNAKARGGFEYFITFTDDYSRYGYVYLMQHKSEALEKFKEYKAEVENKLSKTIKTFRS
Query: DRGGEYMDLKFQNYLMECEIVSQLSAPGTPQQNGVLERRNRTLLDMVWSMMSYAHLPNSFRGYAVQATVYILNCVPSKSI---SEIPLKLWIGHKGSLRH
D G EY+ + + + ++ I L+ P TPQ NGV ER RT+ + +M+S A L SF G AV Y++N +PS+++ S+ P ++W K L+H
Subjt: DRGGEYMDLKFQNYLMECEIVSQLSAPGTPQQNGVLERRNRTLLDMVWSMMSYAHLPNSFRGYAVQATVYILNCVPSKSI---SEIPLKLWIGHKGSLRH
Query: FRIWGCQAHV-LETNPKKLEPRSKLCLFVGY-PKGTR-----DGYFYGLKD---------NKVFVSTNATFLEEDHIREYK----PRSKIVLNELSNEST
R++G +V ++ K + +S +FVGY P G + + F +D N V FL++ E K KI+ E NES
Subjt: FRIWGCQAHV-LETNPKKLEPRSKLCLFVGY-PKGTR-----DGYFYGLKD---------NKVFVSTNATFLEEDHIREYK----PRSKIVLNELSNEST
Query: E-------------------------LSTRVVEEPSTLARVVHVSSS-----------------IRIRQPKSLGEP------------------------
E + T E + + S + + K G P
Subjt: E-------------------------LSTRVVEEPSTLARVVHVSSS-----------------IRIRQPKSLGEP------------------------
Query: ------RRSGRVTNLP-IHYMSLTETL--TVISDGNIGD--PLTFKKAMEDVDKDEWIKAMNLELESMYFNLVWDLVDQPDGVKPIGCKWIYKRKRGADG
RRS R+ P I Y +L V++ I + P +F + DK W +A+N EL + N W + +P+ + +W++ K G
Subjt: ------RRSGRVTNLP-IHYMSLTETL--TVISDGNIGD--PLTFKKAMEDVDKDEWIKAMNLELESMYFNLVWDLVDQPDGVKPIGCKWIYKRKRGADG
Query: KVQTFKARLVAKGYTQVEGVDYEKIFSSVAMLKSIRILLSIAAYFDYEIWQMYVKTTILNDNLEETIYMQQPEG
+KARLVA+G+TQ +DYE+ F+ VA + S R +LS+ ++ ++ QM VKT LN L+E IYM+ P+G
Subjt: KVQTFKARLVAKGYTQVEGVDYEKIFSSVAMLKSIRILLSIAAYFDYEIWQMYVKTTILNDNLEETIYMQQPEG
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| P10978 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 2.0e-78 | 36.29 | Show/hide |
Query: CESCLEGKMTKRPFTGKGHISKEPLELVHSDLCGPMNAKARGGFEYFITFTDDYSRYGYVYLMQHKSEALEKFKEYKAEVENKLSKTIKTFRSDRGGEYM
C+ CL GK + F L+LV+SD+CGPM ++ GG +YF+TF DD SR +VY+++ K + + F+++ A VE + + +K RSD GGEY
Subjt: CESCLEGKMTKRPFTGKGHISKEPLELVHSDLCGPMNAKARGGFEYFITFTDDYSRYGYVYLMQHKSEALEKFKEYKAEVENKLSKTIKTFRSDRGGEYM
Query: DLKFQNYLMECEIVSQLSAPGTPQQNGVLERRNRTLLDMVWSMMSYAHLPNSFRGYAVQATVYILNCVPSKSIS-EIPLKLWIGHKGSLRHFRIWGCQ--
+F+ Y I + + PGTPQ NGV ER NRT+++ V SM+ A LP SF G AVQ Y++N PS ++ EIP ++W + S H +++GC+
Subjt: DLKFQNYLMECEIVSQLSAPGTPQQNGVLERRNRTLLDMVWSMMSYAHLPNSFRGYAVQATVYILNCVPSKSIS-EIPLKLWIGHKGSLRHFRIWGCQ--
Query: AHVLETNPKKLEPRSKLCLFVGYPKGTRDGYFYGLKD---NKVFVSTNATFLEEDHIREYKPRSKIVLNEL---------------SNEST--ELSTRVV
AHV + KL+ +S C+F+GY + + Y L D KV S + F E +R S+ V N + S EST E+S +
Subjt: AHVLETNPKKLEPRSKLCLFVGYPKGTRDGYFYGLKD---NKVFVSTNATFLEEDHIREYKPRSKIVLNEL---------------SNEST--ELSTRVV
Query: EEPSTLARVVHVSSSIRIRQPKSLGEP-----RRSGRVTNLPIHYMSLTETLTVISDGNIGDPLTFKKAMEDVDKDEWIKAMNLELESMYFNLVWDLVDQ
+ + + + + + + GE RRS R Y S TE + + D +P + K+ + +K++ +KAM E+ES+ N + LV+
Subjt: EEPSTLARVVHVSSSIRIRQPKSLGEP-----RRSGRVTNLPIHYMSLTETLTVISDGNIGDPLTFKKAMEDVDKDEWIKAMNLELESMYFNLVWDLVDQ
Query: PDGVKPIGCKWIYKRKRGADGKVQTFKARLVAKGYTQVEGVDYEKIFSSVAMLKSIRILLSIAAYFDYEIWQMYVKTTILNDNLEETIYMQQPEGF
P G +P+ CKW++K K+ D K+ +KARLV KG+ Q +G+D+++IFS V + SIR +LS+AA D E+ Q+ VKT L+ +LEE IYM+QPEGF
Subjt: PDGVKPIGCKWIYKRKRGADGKVQTFKARLVAKGYTQVEGVDYEKIFSSVAMLKSIRILLSIAAYFDYEIWQMYVKTTILNDNLEETIYMQQPEGF
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| Q12490 Transposon Ty1-BL Gag-Pol polyprotein | 1.9e-15 | 30.11 | Show/hide |
Query: CESCLEGKMTK-RPFTG---KGHISKEPLELVHSDLCGPMNAKARGGFEYFITFTDDYSRYGYVYLMQHKSE--ALEKFKEYKAEVENKLSKTIKTFRSD
C CL GK TK R G K S EP + +H+D+ GP++ + YFI+FTD+ +++ +VY + + E L+ F A ++N+ ++ + D
Subjt: CESCLEGKMTK-RPFTG---KGHISKEPLELVHSDLCGPMNAKARGGFEYFITFTDDYSRYGYVYLMQHKSE--ALEKFKEYKAEVENKLSKTIKTFRSD
Query: RGGEYMDLKFQNYLMECEIVSQLSAPGTPQQNGVLERRNRTLLDMVWSMMSYAHLPNSFRGYAVQATVYILNCVPS
RG EY + +L + I + + +GV ER NRTLLD + + + LPN A++ + + N + S
Subjt: RGGEYMDLKFQNYLMECEIVSQLSAPGTPQQNGVLERRNRTLLDMVWSMMSYAHLPNSFRGYAVQATVYILNCVPS
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| Q94HW2 Retrovirus-related Pol polyprotein from transposon RE1 | 1.6e-46 | 25.34 | Show/hide |
Query: CESCLEGKMTKRPFTGKGHISKEPLELVHSDLCGPMNAKARGGFEYFITFTDDYSRYGYVYLMQHKSEALEKFKEYKAEVENKLSKTIKTFRSDRGGEYM
C CL K K PF+ S PLE ++SD+ + + Y++ F D ++RY ++Y ++ KS+ E F +K +EN+ I TF SD GGE++
Subjt: CESCLEGKMTKRPFTGKGHISKEPLELVHSDLCGPMNAKARGGFEYFITFTDDYSRYGYVYLMQHKSEALEKFKEYKAEVENKLSKTIKTFRSDRGGEYM
Query: DLKFQNYLMECEIVSQLSAPGTPQQNGVLERRNRTLLDMVWSMMSYAHLPNSFRGYAVQATVYILNCVPSKSIS-EIPLKLWIGHKGSLRHFRIWGCQAH
L Y + I S P TP+ NG+ ER++R +++ +++S+A +P ++ YA VY++N +P+ + E P + G + R++GC +
Subjt: DLKFQNYLMECEIVSQLSAPGTPQQNGVLERRNRTLLDMVWSMMSYAHLPNSFRGYAVQATVYILNCVPSKSIS-EIPLKLWIGHKGSLRHFRIWGCQAH
Query: --VLETNPKKLEPRSKLCLFVGYPKGTRDGYF-YGLKDNKVFVSTNATFLEE-----------DHIREYKPRSKIV------------------------
+ N KL+ +S+ C+F+GY T+ Y L+ +++++S + F E ++E + S V
Subjt: --VLETNPKKLEPRSKLCLFVGYPKGTRDGYF-YGLKDNKVFVSTNATFLEE-----------DHIREYKPRSKIV------------------------
Query: ------------------------------------------------------LNELSNESTELSTRVVEEPSTLARVVHVSS----------------
S+++T + E PS LA+ + +
Subjt: ------------------------------------------------------LNELSNESTELSTRVVEEPSTLARVVHVSS----------------
Query: -------SIRIRQPKSLGEPRRSGRVTNLPIHYMSLTETLTVI----------SDGNIGDPLTFKKAMEDVDKDEWIKAMNLELESMYFNLVWDLVDQPD
SI I P L + + L H M +I S +P T +A++D + W AM E+ + N WDLV P
Subjt: -------SIRIRQPKSLGEPRRSGRVTNLPIHYMSLTETLTVI----------SDGNIGDPLTFKKAMEDVDKDEWIKAMNLELESMYFNLVWDLVDQPD
Query: G-VKPIGCKWIYKRKRGADGKVQTFKARLVAKGYTQVEGVDYEKIFSSVAMLKSIRILLSIAAYFDYEIWQMYVKTTILNDNLEETIYMQQPEGFI
V +GC+WI+ +K +DG + +KARLVAKGY Q G+DY + FS V SIRI+L +A + I Q+ V L L + +YM QP GFI
Subjt: G-VKPIGCKWIYKRKRGADGKVQTFKARLVAKGYTQVEGVDYEKIFSSVAMLKSIRILLSIAAYFDYEIWQMYVKTTILNDNLEETIYMQQPEGFI
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| Q9ZT94 Retrovirus-related Pol polyprotein from transposon RE2 | 2.3e-45 | 24.92 | Show/hide |
Query: VRRNSLPV---------CESCLEGKMTKRPFTGKGHISKEPLELVHSDLCGPMNAKARGGFEYFITFTDDYSRYGYVYLMQHKSEALEKFKEYKAEVENK
+ +SLPV C C K K PF+ S +PLE ++SD+ + + Y++ F D ++RY ++Y ++ KS+ + F +K+ VEN+
Subjt: VRRNSLPV---------CESCLEGKMTKRPFTGKGHISKEPLELVHSDLCGPMNAKARGGFEYFITFTDDYSRYGYVYLMQHKSEALEKFKEYKAEVENK
Query: LSKTIKTFRSDRGGEYMDLKFQNYLMECEIVSQLSAPGTPQQNGVLERRNRTLLDMVWSMMSYAHLPNSFRGYAVQATVYILNCVPSKSIS-EIPLKLWI
I T SD GGE++ L+ +YL + I S P TP+ NG+ ER++R +++M +++S+A +P ++ YA VY++N +P+ + + P +
Subjt: LSKTIKTFRSDRGGEYMDLKFQNYLMECEIVSQLSAPGTPQQNGVLERRNRTLLDMVWSMMSYAHLPNSFRGYAVQATVYILNCVPSKSIS-EIPLKLWI
Query: GHKGSLRHFRIWGCQAH--VLETNPKKLEPRSKLCLFVGYPKGTRDGYF-YGLKDNKVFVSTNATFLEE-------------------------------
G + +++GC + + N KLE +SK C F+GY T+ Y + +++ S + F E
Subjt: GHKGSLRHFRIWGCQAH--VLETNPKKLEPRSKLCLFVGYPKGTRDGYF-YGLKDNKVFVSTNATFLEE-------------------------------
Query: --------------DHIREYKPR-----SKIVLNELSNE---STELSTRVVEEPSTLAR-------VVHVSSSIRIRQP---------KSLGEPRRSGRV
H+ + PR S + ++S+ S+ +S+ EP+ + H + + P S P ++ +
Subjt: --------------DHIREYKPR-----SKIVLNELSNE---STELSTRVVEEPSTLAR-------VVHVSSSIRIRQP---------KSLGEPRRSGRV
Query: TNLPIHYMSLTETLTVISDGNI----------------------------------------------------------GDPLTFKKAMEDVDKDEWIK
PI + T IS+ N +P T +AM+D D W +
Subjt: TNLPIHYMSLTETLTVISDGNI----------------------------------------------------------GDPLTFKKAMEDVDKDEWIK
Query: AMNLELESMYFNLVWDLV-DQPDGVKPIGCKWIYKRKRGADGKVQTFKARLVAKGYTQVEGVDYEKIFSSVAMLKSIRILLSIAAYFDYEIWQMYVKTTI
AM E+ + N WDLV P V +GC+WI+ +K +DG + +KARLVAKGY Q G+DY + FS V SIRI+L +A + I Q+ V
Subjt: AMNLELESMYFNLVWDLV-DQPDGVKPIGCKWIYKRKRGADGKVQTFKARLVAKGYTQVEGVDYEKIFSSVAMLKSIRILLSIAAYFDYEIWQMYVKTTI
Query: LNDNLEETIYMQQPEGFI
L L + +YM QP GF+
Subjt: LNDNLEETIYMQQPEGFI
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| Arabidopsis top hits | e value | %identity | Alignment |
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| AT4G23160.1 cysteine-rich RLK (RECEPTOR-like protein kinase) 8 | 8.4e-27 | 40.74 | Show/hide |
Query: DPLTFKKAMEDVDKDEWIKAMNLELESMYFNLVWDLVDQPDGVKPIGCKWIYKRKRGADGKVQTFKARLVAKGYTQVEGVDYEKIFSSVAMLKSIRILLS
+P T+ +A E + W AM+ E+ +M W++ P KPIGCKW+YK K +DG ++ +KARLVAKGYTQ EG+D+ + FS V L S++++L+
Subjt: DPLTFKKAMEDVDKDEWIKAMNLELESMYFNLVWDLVDQPDGVKPIGCKWIYKRKRGADGKVQTFKARLVAKGYTQVEGVDYEKIFSSVAMLKSIRILLS
Query: IAAYFDYEIWQMYVKTTILNDNLEETIYMQQPEGF
I+A +++ + Q+ + LN +L+E IYM+ P G+
Subjt: IAAYFDYEIWQMYVKTTILNDNLEETIYMQQPEGF
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| ATMG00710.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein | 3.3e-07 | 34.15 | Show/hide |
Query: NRTLLDMVWSMMSYAHLPNSFRGYAVQATVYILNCVPSKSIS-EIPLKLWIGHKGSLRHFRIWGCQAHVLETNPKKLEPRSK
NRT+++ V SM+ LP +FR A V+I+N PS +I+ +P ++W + + R +GC A++ + KL+PR+K
Subjt: NRTLLDMVWSMMSYAHLPNSFRGYAVQATVYILNCVPSKSIS-EIPLKLWIGHKGSLRHFRIWGCQAHVLETNPKKLEPRSK
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| ATMG00820.1 Reverse transcriptase (RNA-dependent DNA polymerase) | 1.8e-13 | 40.7 | Show/hide |
Query: WIKAMNLELESMYFNLVWDLVDQPDGVKPIGCKWIYKRKRGADGKVQTFKARLVAKGYTQVEGVDYEKIFSSVAMLKSIRILLSIA
W +AM EL+++ N W LV P +GCKW++K K +DG + KARLVAKG+ Q EG+ + + +S V +IR +L++A
Subjt: WIKAMNLELESMYFNLVWDLVDQPDGVKPIGCKWIYKRKRGADGKVQTFKARLVAKGYTQVEGVDYEKIFSSVAMLKSIRILLSIA
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