; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

IVF0003030 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0003030
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionB3 domain-containing protein
Genome locationtig00000267:931952..935058
RNA-Seq ExpressionIVF0003030
SyntenyIVF0003030
Gene Ontology termsGO:0005634 - nucleus (cellular component)
GO:0016021 - integral component of membrane (cellular component)
GO:0003677 - DNA binding (molecular function)
InterPro domainsIPR003340 - B3 DNA binding domain
IPR015300 - DNA-binding pseudobarrel domain superfamily
IPR044837 - B3 domain-containing protein REM16-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_011650806.1 B3 domain-containing protein Os04g0386900 [Cucumis sativus]2.33e-9995.92Show/hide
Query:  MQSERNPPTELPTIEPQNGETMPLSGKPYHAFILSKSHVAPIYNLVLPAKFHSILPAIVIPAVLLCRGKKWKIDYYGNRRGKALDSKQWRKFVNDNCLKS
        MQS R PPTELPT+EPQNGETMPLSGKPYHAFILSKSHVAPIYNLVLPAKFHSILPAIVIPAVLLCRGKKWKIDY+GNRRGKALDSKQWRKFVNDNCLKS
Subjt:  MQSERNPPTELPTIEPQNGETMPLSGKPYHAFILSKSHVAPIYNLVLPAKFHSILPAIVIPAVLLCRGKKWKIDYYGNRRGKALDSKQWRKFVNDNCLKS

Query:  GDACVFELLECSSSILKFRVQILRGDIPLELHDKFSGETKETPIHLD
        GDA VFELLECSSSILKFRVQIL GDIPLELHDKFSGETKETPIHLD
Subjt:  GDACVFELLECSSSILKFRVQILRGDIPLELHDKFSGETKETPIHLD

XP_022941967.1 B3 domain-containing protein Os04g0386900-like [Cucurbita moschata]1.55e-7976.19Show/hide
Query:  MQSERNPPTELPTIEPQNGETMPLSGKPYHAFILSKSHVAPIYNLVLPAKFHSILPAIVIPAVLLCRGKKWKIDYYGNRRGKALDSKQWRKFVNDNCLKS
        MQS+  PP E   ++PQN   +PLSGKPYH  ILSKSHVAPI N+ LPAKFHS+LPAI+IPAVL C GKKWKIDYYGNRRGKALD+KQWRKFVNDN LK 
Subjt:  MQSERNPPTELPTIEPQNGETMPLSGKPYHAFILSKSHVAPIYNLVLPAKFHSILPAIVIPAVLLCRGKKWKIDYYGNRRGKALDSKQWRKFVNDNCLKS

Query:  GDACVFELLECSSSILKFRVQILRGDIPLELHDKFSGETKETPIHLD
        GDACVFEL+ECSSS++KFRVQILRGDIP ELH+KFSGE++ TPI +D
Subjt:  GDACVFELLECSSSILKFRVQILRGDIPLELHDKFSGETKETPIHLD

XP_022974195.1 B3 domain-containing protein Os04g0386900-like [Cucurbita maxima]9.35e-8177.55Show/hide
Query:  MQSERNPPTELPTIEPQNGETMPLSGKPYHAFILSKSHVAPIYNLVLPAKFHSILPAIVIPAVLLCRGKKWKIDYYGNRRGKALDSKQWRKFVNDNCLKS
        MQS+  PPTE   ++PQN   +PLSGKPYH  ILSKSHVAPI N+ LPAKFHS+LPAI+IPAVL C GKKWKIDYYGNRRGKALD+KQWRKFVNDN LK 
Subjt:  MQSERNPPTELPTIEPQNGETMPLSGKPYHAFILSKSHVAPIYNLVLPAKFHSILPAIVIPAVLLCRGKKWKIDYYGNRRGKALDSKQWRKFVNDNCLKS

Query:  GDACVFELLECSSSILKFRVQILRGDIPLELHDKFSGETKETPIHLD
        GDACVFEL+ECSSS+LKFRVQILRGDIP ELH+KFSGE++ TPI +D
Subjt:  GDACVFELLECSSSILKFRVQILRGDIPLELHDKFSGETKETPIHLD

XP_023539026.1 B3 domain-containing protein Os04g0386900-like [Cucurbita pepo subsp. pepo]3.81e-8076.19Show/hide
Query:  MQSERNPPTELPTIEPQNGETMPLSGKPYHAFILSKSHVAPIYNLVLPAKFHSILPAIVIPAVLLCRGKKWKIDYYGNRRGKALDSKQWRKFVNDNCLKS
        MQS+  PPTE   ++PQN   +PLSGKPYH  ILSKSHVAPI N+ +PAKFHS+LPAI+IPAVL C GKKWKIDYYGNRRGKALD+KQWRKFVNDN LK 
Subjt:  MQSERNPPTELPTIEPQNGETMPLSGKPYHAFILSKSHVAPIYNLVLPAKFHSILPAIVIPAVLLCRGKKWKIDYYGNRRGKALDSKQWRKFVNDNCLKS

Query:  GDACVFELLECSSSILKFRVQILRGDIPLELHDKFSGETKETPIHLD
        GDACVFEL+ECSSS++KFRVQILRGDIP ELH+KFSGE++ TPI +D
Subjt:  GDACVFELLECSSSILKFRVQILRGDIPLELHDKFSGETKETPIHLD

XP_038903804.1 B3 domain-containing protein Os04g0386900-like [Benincasa hispida]5.70e-9187.07Show/hide
Query:  MQSERNPPTELPTIEPQNGETMPLSGKPYHAFILSKSHVAPIYNLVLPAKFHSILPAIVIPAVLLCRGKKWKIDYYGNRRGKALDSKQWRKFVNDNCLKS
        MQS+R PPTELPT+EPQ+GE +PLSGKPYHAFILSKSHVAPI +LVLPAKFHSILPAIVIPAVL C+GKKW IDYYGNRRGKALD+KQWRKFVNDN LKS
Subjt:  MQSERNPPTELPTIEPQNGETMPLSGKPYHAFILSKSHVAPIYNLVLPAKFHSILPAIVIPAVLLCRGKKWKIDYYGNRRGKALDSKQWRKFVNDNCLKS

Query:  GDACVFELLECSSSILKFRVQILRGDIPLELHDKFSGETKETPIHLD
        GDACVFEL+ECSSSILKFRVQILRGDIP +LHDKFSGETK+TPI+L+
Subjt:  GDACVFELLECSSSILKFRVQILRGDIPLELHDKFSGETKETPIHLD

TrEMBL top hitse value%identityAlignment
A0A0A0L3V3 TF-B3 domain-containing protein1.1e-7595.92Show/hide
Query:  MQSERNPPTELPTIEPQNGETMPLSGKPYHAFILSKSHVAPIYNLVLPAKFHSILPAIVIPAVLLCRGKKWKIDYYGNRRGKALDSKQWRKFVNDNCLKS
        MQS R PPTELPT+EPQNGETMPLSGKPYHAFILSKSHVAPIYNLVLPAKFHSILPAIVIPAVLLCRGKKWKIDY+GNRRGKALDSKQWRKFVNDNCLKS
Subjt:  MQSERNPPTELPTIEPQNGETMPLSGKPYHAFILSKSHVAPIYNLVLPAKFHSILPAIVIPAVLLCRGKKWKIDYYGNRRGKALDSKQWRKFVNDNCLKS

Query:  GDACVFELLECSSSILKFRVQILRGDIPLELHDKFSGETKETPIHLD
        GDA VFELLECSSSILKFRVQIL GDIPLELHDKFSGETKETPIHLD
Subjt:  GDACVFELLECSSSILKFRVQILRGDIPLELHDKFSGETKETPIHLD

A0A5D3D009 B3 domain-containing protein1.7e-52100Show/hide
Query:  VLPAKFHSILPAIVIPAVLLCRGKKWKIDYYGNRRGKALDSKQWRKFVNDNCLKSGDACVFELLECSSSILKFRVQILRGDIPLELHDKFSGETKETPIH
        VLPAKFHSILPAIVIPAVLLCRGKKWKIDYYGNRRGKALDSKQWRKFVNDNCLKSGDACVFELLECSSSILKFRVQILRGDIPLELHDKFSGETKETPIH
Subjt:  VLPAKFHSILPAIVIPAVLLCRGKKWKIDYYGNRRGKALDSKQWRKFVNDNCLKSGDACVFELLECSSSILKFRVQILRGDIPLELHDKFSGETKETPIH

Query:  LD
        LD
Subjt:  LD

A0A6J1D033 B3 domain-containing protein Os04g0386900-like2.1e-5873.47Show/hide
Query:  MQSERNPPTELPTIEPQNGETMPLSGKPYHAFILSKSHVAPIYNLVLPAKFHSILPAIVIPAVLLCRGKKWKIDYYGNRRGKALDSKQWRKFVNDNCLKS
        MQS+  PP+E  T+EP+N E  PLS KP+H  IL+KSHVAPIYN+ LPAKFHS+LPAIVI  VL C GK+W +DYYGNRRGK+LD++ WRKFVNDN LKS
Subjt:  MQSERNPPTELPTIEPQNGETMPLSGKPYHAFILSKSHVAPIYNLVLPAKFHSILPAIVIPAVLLCRGKKWKIDYYGNRRGKALDSKQWRKFVNDNCLKS

Query:  GDACVFELLECSSSILKFRVQILRGDIPLELHDKFSGETKETPIHLD
        GDACVFEL+ECSSS LKFRVQILRGDIP++LHDKFSGE+K+TPI +D
Subjt:  GDACVFELLECSSSILKFRVQILRGDIPLELHDKFSGETKETPIHLD

A0A6J1FTK2 B3 domain-containing protein Os04g0386900-like1.3e-6076.19Show/hide
Query:  MQSERNPPTELPTIEPQNGETMPLSGKPYHAFILSKSHVAPIYNLVLPAKFHSILPAIVIPAVLLCRGKKWKIDYYGNRRGKALDSKQWRKFVNDNCLKS
        MQS+  PP E   ++PQN   +PLSGKPYH  ILSKSHVAPI N+ LPAKFHS+LPAI+IPAVL C GKKWKIDYYGNRRGKALD+KQWRKFVNDN LK 
Subjt:  MQSERNPPTELPTIEPQNGETMPLSGKPYHAFILSKSHVAPIYNLVLPAKFHSILPAIVIPAVLLCRGKKWKIDYYGNRRGKALDSKQWRKFVNDNCLKS

Query:  GDACVFELLECSSSILKFRVQILRGDIPLELHDKFSGETKETPIHLD
        GDACVFEL+ECSSS++KFRVQILRGDIP ELH+KFSGE++ TPI +D
Subjt:  GDACVFELLECSSSILKFRVQILRGDIPLELHDKFSGETKETPIHLD

A0A6J1IDC2 B3 domain-containing protein Os04g0386900-like1.5e-6177.55Show/hide
Query:  MQSERNPPTELPTIEPQNGETMPLSGKPYHAFILSKSHVAPIYNLVLPAKFHSILPAIVIPAVLLCRGKKWKIDYYGNRRGKALDSKQWRKFVNDNCLKS
        MQS+  PPTE   ++PQN   +PLSGKPYH  ILSKSHVAPI N+ LPAKFHS+LPAI+IPAVL C GKKWKIDYYGNRRGKALD+KQWRKFVNDN LK 
Subjt:  MQSERNPPTELPTIEPQNGETMPLSGKPYHAFILSKSHVAPIYNLVLPAKFHSILPAIVIPAVLLCRGKKWKIDYYGNRRGKALDSKQWRKFVNDNCLKS

Query:  GDACVFELLECSSSILKFRVQILRGDIPLELHDKFSGETKETPIHLD
        GDACVFEL+ECSSS+LKFRVQILRGDIP ELH+KFSGE++ TPI +D
Subjt:  GDACVFELLECSSSILKFRVQILRGDIPLELHDKFSGETKETPIHLD

SwissProt top hitse value%identityAlignment
Q2QMT5 B3 domain-containing protein LOC_Os12g400904.8e-0428.09Show/hide
Query:  GKPYHAFILSKSHVAPIYNLVLPAKF---HSILPAIVIPAVLLCRGKKWKIDYYG-NRRGKALDSKQWRKFVNDNCLKSGDACVFELLE
        G P    +L  +HV     L++P +F   H    +  I  +   R +KW + YY  +   +  +  +W KF+ +N L+ G+ C+FEL++
Subjt:  GKPYHAFILSKSHVAPIYNLVLPAKF---HSILPAIVIPAVLLCRGKKWKIDYYG-NRRGKALDSKQWRKFVNDNCLKSGDACVFELLE

Q7XLP4 B3 domain-containing protein Os04g03869004.3e-2140.28Show/hide
Query:  PPTELPTIEPQNGETMPLSGKPYHAFILSKSHVAPIYNLVLPAKFHSILPAIVIPAVLLCRGKKWKIDYYGNRRGKALDSKQWRKFVNDNCLKSGDACVF
        PP   P    ++G  +PL GKPY   I+ KSHV P + +V+P  F  +LP+   PA L  RG+ W + + G R  + L++  WR F  DN L+ GD CVF
Subjt:  PPTELPTIEPQNGETMPLSGKPYHAFILSKSHVAPIYNLVLPAKFHSILPAIVIPAVLLCRGKKWKIDYYGNRRGKALDSKQWRKFVNDNCLKSGDACVF

Query:  ELL---ECSSSILKFRVQILRGDIPLELHDKFSGETKETPIHLD
        ELL         ++FRVQ+LR +IP  +  +  G T  TPI +D
Subjt:  ELL---ECSSSILKFRVQILRGDIPLELHDKFSGETKETPIHLD

Q8RYD1 B3 domain-containing protein REM166.3e-0434.38Show/hide
Query:  LSKSHVAPIYNLVLPAKFHSILPAIVIPAVLL-CRGKKW--KIDYYGNRRGKALDSKQWRKFVNDNCLKSGDACVFELLECSSSILKFRVQILRGD
        + +SHV     L +P K+      I    V++     KW  K + +G  RG    S  W+KFV DN L+ GD CVFE     +  L   V I RG+
Subjt:  LSKSHVAPIYNLVLPAKFHSILPAIVIPAVLL-CRGKKW--KIDYYGNRRGKALDSKQWRKFVNDNCLKSGDACVFELLECSSSILKFRVQILRGD

Q8S2E6 B3 domain-containing protein Os01g07235003.7e-0435.35Show/hide
Query:  PYHAFILSKSHVAPIYNLVLPAKF-HSILPAIVIPAVLL-CRGKKWKIDYYGNRRGKALDSKQWRKFVNDNCLKSGDACVFELLECSSSILKFRVQILR
        PY    +S  HV   + +  P  F    LP      VL    GK W + Y  N R +   S+ W  F   NCL+ GD CVFEL+  +    +FRV I R
Subjt:  PYHAFILSKSHVAPIYNLVLPAKF-HSILPAIVIPAVLL-CRGKKWKIDYYGNRRGKALDSKQWRKFVNDNCLKSGDACVFELLECSSSILKFRVQILR

Q9LHY9 B3 domain-containing protein Os06g01123003.9e-1436.88Show/hide
Query:  PPTELPTIEPQNGETMPLSGKPYHAFILSKSHVAPIYNLVLPAKFHSIL--PAIVIPAVLLCRGKKWKIDYYGNRRGKALDSKQWRKFVNDNCLKSGDAC
        PP    + E     T   +G P+   +++KSH+ P + + +P +F   L  P     AVL   GK W   Y G+ + K LD+  W +F  DN L  GDAC
Subjt:  PPTELPTIEPQNGETMPLSGKPYHAFILSKSHVAPIYNLVLPAKFHSIL--PAIVIPAVLLCRGKKWKIDYYGNRRGKALDSKQWRKFVNDNCLKSGDAC

Query:  VFELLEC-SSSILKFRVQILRGDIPLELHDKFSGETKETPI
        VFEL+   ++  L+F+VQILRG +P E+     G T + PI
Subjt:  VFELLEC-SSSILKFRVQILRGDIPLELHDKFSGETKETPI

Arabidopsis top hitse value%identityAlignment
AT4G33280.1 AP2/B3-like transcriptional factor family protein4.5e-0534.38Show/hide
Query:  LSKSHVAPIYNLVLPAKFHSILPAIVIPAVLL-CRGKKW--KIDYYGNRRGKALDSKQWRKFVNDNCLKSGDACVFELLECSSSILKFRVQILRGD
        + +SHV     L +P K+      I    V++     KW  K + +G  RG    S  W+KFV DN L+ GD CVFE     +  L   V I RG+
Subjt:  LSKSHVAPIYNLVLPAKFHSILPAIVIPAVLL-CRGKKW--KIDYYGNRRGKALDSKQWRKFVNDNCLKSGDACVFELLECSSSILKFRVQILRGD


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCAGTCAGAAAGGAATCCTCCGACAGAGCTTCCAACAATAGAGCCGCAAAATGGAGAAACTATGCCCCTTTCAGGCAAACCCTACCATGCTTTTATTCTTTCTAAATC
GCATGTTGCTCCCATATATAATTTGGTTTTGCCGGCTAAATTTCATTCTATTTTACCTGCTATTGTCATCCCTGCGGTTCTTTTATGTCGAGGCAAGAAATGGAAGATAG
ATTATTATGGAAACAGACGTGGTAAGGCACTCGATTCAAAACAGTGGAGGAAATTTGTTAATGATAATTGTCTCAAATCCGGAGATGCTTGTGTATTTGAGCTCTTGGAG
TGCAGCAGCAGCATACTTAAATTTAGAGTTCAAATTCTCCGTGGTGACATACCTTTGGAGCTGCACGACAAGTTCAGTGGGGAGACAAAAGAGACCCCCATACACCTTGA
CTAG
mRNA sequenceShow/hide mRNA sequence
CACAAAATAAGGGACTGATTCACGTCCTTTTCTCAAGAATGAATGATCTGAAGAAAATACGGCGACTGATTGTCTCGCCATCTGCTTCCTTCGAGCCCAAAGGCTTCTGT
AAGTGATTTGTACTGAAAAACGGTCCGCAGATGCAGTCAGAAAGGAATCCTCCGACAGAGCTTCCAACAATAGAGCCGCAAAATGGAGAAACTATGCCCCTTTCAGGCAA
ACCCTACCATGCTTTTATTCTTTCTAAATCGCATGTTGCTCCCATATATAATTTGGTTTTGCCGGCTAAATTTCATTCTATTTTACCTGCTATTGTCATCCCTGCGGTTC
TTTTATGTCGAGGCAAGAAATGGAAGATAGATTATTATGGAAACAGACGTGGTAAGGCACTCGATTCAAAACAGTGGAGGAAATTTGTTAATGATAATTGTCTCAAATCC
GGAGATGCTTGTGTATTTGAGCTCTTGGAGTGCAGCAGCAGCATACTTAAATTTAGAGTTCAAATTCTCCGTGGTGACATACCTTTGGAGCTGCACGACAAGTTCAGTGG
GGAGACAAAAGAGACCCCCATACACCTTGACTAGCTTCCCTTTGTGTGGTTTCGTAGTTTTCAAAAGTCCCGACTTGTCGACATCATATTGCGGTTCTAGAATCAGACAG
CCTATTTGATATTTGTAAGTAATATGTAATCCTGTTTTTTATTATCTCATGAATGTACAACTGAAAAAGTTTTCAAATTTTCATGGTTCTTTTTTTAAAAAACAAAGTTT
TCATTCTATATTTCATTTTCTTTGCATCTGAACTAGGGGGAACCTTTAATACATGTTTTAGGAAGCAGCAGGGGAAACCATAGATCATTATCCACTCATGCTTAGTCAAT
ACTCCTTCCCCTTCTTGTACTGTGTGTTGTTGCAACTTCATTGCTTAAGCACGACTGCTTAAAAGATTGGACATCAAGTGAAGCTAAAGTTCAATGATTGTATTTCAGTA
ACGTATTTCTTGAGTTTTTTTAATTTAATTTTATTTATAATAACAATTATTATTCTTTTATCAGCATGAATGTTCTTGGTGCAAACATTACATTGCCATAGCATAATGTT
TTGCTGGAGAATTTTGGGTTGAAGGGTTCGTCCAGTACCATAGCATAATGTTCGTCCAGTCTATGCTTCAAATATGCATATGCACTCGTAGGACTTTCGAGACCCCATAT
TTCGTCATCCCAAAGATACATGAATTACAGATTATTAAACCCTCTCGAACTTGGTCTCCATATATGTCTTACTTTCATCTTGAATATTTTGCTAGATGTAGTTCAACCAA
GATGGTTTTGGTGCTGCAATGAAGTTGTGCTTCCTCGTGAGACGTGCAATGCATTATGTTACTTGTGTTCTTATGCCAAATGCACCAGGGTATATGGTTAATATGTAGAT
CCATTTTTGATTGTCATGACCGACACATCTTCATATAGTTGTTAAATCTTGAATCTCAATCTATTTCCTCTTTGTATTTCTTCAACCTTCTGCTCTGAAATCTAGATGGC
ATAAATCTCAATGTTTTCTTTCCA
Protein sequenceShow/hide protein sequence
MQSERNPPTELPTIEPQNGETMPLSGKPYHAFILSKSHVAPIYNLVLPAKFHSILPAIVIPAVLLCRGKKWKIDYYGNRRGKALDSKQWRKFVNDNCLKSGDACVFELLE
CSSSILKFRVQILRGDIPLELHDKFSGETKETPIHLD