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IVF0003034 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0003034
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Descriptionserine/arginine repetitive matrix protein 1
Genome locationchr11:28685893..28686576
RNA-Seq ExpressionIVF0003034
SyntenyIVF0003034
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_008459744.1 PREDICTED: uncharacterized protein LOC103498786 [Cucumis melo]1.85e-106100Show/hide
Query:  MWAASSTSPSPSFRRLPITTTPPPAAPVSLFYAKSHPPKMDAENTKPNNSGTIKSFGHKILSAVNSPTPQSLNQTTPKHESQPEAPQISGSDVLRALQKA
        MWAASSTSPSPSFRRLPITTTPPPAAPVSLFYAKSHPPKMDAENTKPNNSGTIKSFGHKILSAVNSPTPQSLNQTTPKHESQPEAPQISGSDVLRALQKA
Subjt:  MWAASSTSPSPSFRRLPITTTPPPAAPVSLFYAKSHPPKMDAENTKPNNSGTIKSFGHKILSAVNSPTPQSLNQTTPKHESQPEAPQISGSDVLRALQKA

Query:  AAVKEKNRTQQVKEKKKKKKEGAATEDSYSEMNHRVRPLKIKRDWGLRLTQLEKRLLEMSEPG
        AAVKEKNRTQQVKEKKKKKKEGAATEDSYSEMNHRVRPLKIKRDWGLRLTQLEKRLLEMSEPG
Subjt:  AAVKEKNRTQQVKEKKKKKKEGAATEDSYSEMNHRVRPLKIKRDWGLRLTQLEKRLLEMSEPG

XP_011656857.1 uncharacterized protein LOC105435778 [Cucumis sativus]5.66e-7882.1Show/hide
Query:  MWAASSTSPSPSFRRLPITTTPPPAAPVSLFYAKSHPPKMDAENTKPNNSGTIKSFGHKILSAVNSPTPQSLNQTTPKHESQPEAPQISGSDVLRALQKA
        MWAASSTSP PS  RL ITT+ PP  P+S+F A S P   DAEN KPNNS +IK FGHKILSAVNSPTP+SLNQTTPKHES PEA QISGSDVLRALQKA
Subjt:  MWAASSTSPSPSFRRLPITTTPPPAAPVSLFYAKSHPPKMDAENTKPNNSGTIKSFGHKILSAVNSPTPQSLNQTTPKHESQPEAPQISGSDVLRALQKA

Query:  AAVKEKNRTQQVKEKKKKKKEGAATEDSYSEMNHRVRPLKIKRDWGLRLTQLEKRLLEMSEP
        AAVKEK RTQQVKEKKKKK EGAATEDS SEMNHRVRPLKI RDWGLRLTQLEKRLLE+S+P
Subjt:  AAVKEKNRTQQVKEKKKKKKEGAATEDSYSEMNHRVRPLKIKRDWGLRLTQLEKRLLEMSEP

XP_022959476.1 uncharacterized protein LOC111460438 [Cucurbita moschata]4.50e-5465.24Show/hide
Query:  MWAASSTSPSPSFRRLPITTTPPPAAPVSLFYAKSHPPKMDAENTKPNNSGTIKSFGHKILSAVNSPTPQSLNQTTPKHESQPEAPQISGSDVLRALQKA
        MW A STSPSPS  RLP+ T PPP  PVS  YAK+ PP+ DA+N  PNNS +IKSFGHKILSA NS  P+S +    K ESQ E  QISG DVLRALQKA
Subjt:  MWAASSTSPSPSFRRLPITTTPPPAAPVSLFYAKSHPPKMDAENTKPNNSGTIKSFGHKILSAVNSPTPQSLNQTTPKHESQPEAPQISGSDVLRALQKA

Query:  AAVKEKNRTQQVKEKKKK---KKEGAATEDSYSEMNHRVRPLKIKRDWGLRLTQLEKRLLEMSE
        AAVKEKNRT+Q KE+KK      EG+ +++S  EMN RVRPL+IK DWGLRLT+LEKRL E+SE
Subjt:  AAVKEKNRTQQVKEKKKK---KKEGAATEDSYSEMNHRVRPLKIKRDWGLRLTQLEKRLLEMSE

XP_023006674.1 uncharacterized protein LOC111499329 [Cucurbita maxima]1.05e-5264.63Show/hide
Query:  MWAASSTSPSPSFRRLPITTTPPPAAPVSLFYAKSHPPKMDAENTKPNNSGTIKSFGHKILSAVNSPTPQSLNQTTPKHESQPEAPQISGSDVLRALQKA
        MWAA STSPSPS  RLP+ T P P  PVS  YAK+ PP  DA+N  PNNS +IKSFGHKILSA  S  P+S +    K ESQ E  +ISG DVLRALQKA
Subjt:  MWAASSTSPSPSFRRLPITTTPPPAAPVSLFYAKSHPPKMDAENTKPNNSGTIKSFGHKILSAVNSPTPQSLNQTTPKHESQPEAPQISGSDVLRALQKA

Query:  AAVKEKNRTQQVKEKKKK---KKEGAATEDSYSEMNHRVRPLKIKRDWGLRLTQLEKRLLEMSE
        AAVKEKNRT+QVKE+KK      EG+ +++S  EMN RVRPL+IK DWGLRLT+LEKRL E+SE
Subjt:  AAVKEKNRTQQVKEKKKK---KKEGAATEDSYSEMNHRVRPLKIKRDWGLRLTQLEKRLLEMSE

XP_038906928.1 uncharacterized protein LOC120092795 [Benincasa hispida]1.43e-6974.1Show/hide
Query:  MWAASSTSPSPSFRRLPITTTPPPAAPVSLFYAKSHPPKMDAENTKPNNSGTIKSFGHKILSAVNSPTPQSLN----QTTPKHESQPEAPQISGSDVLRA
        MWAASST P+PS  RLPI T P P  PVS  YA+S PPK DA NT PN+S +IKSFGHKILSAVNSP P+SLN    +TTPK E+QPEA QISGSD+LRA
Subjt:  MWAASSTSPSPSFRRLPITTTPPPAAPVSLFYAKSHPPKMDAENTKPNNSGTIKSFGHKILSAVNSPTPQSLN----QTTPKHESQPEAPQISGSDVLRA

Query:  LQKAAAVKEKNRTQQVKEKKKKKKEGAATEDSYSEMNHRVRPLKIKRDWGLRLTQLEKRLLEMSEP
        LQKAAAVKEKNRT+QVK KKK   EG  TE S+SEMNHRVRPLKIK DWGLRL+QLEKRL E SEP
Subjt:  LQKAAAVKEKNRTQQVKEKKKKKKEGAATEDSYSEMNHRVRPLKIKRDWGLRLTQLEKRLLEMSEP

TrEMBL top hitse value%identityAlignment
A0A0A0KCJ8 Uncharacterized protein7.1e-6082.1Show/hide
Query:  MWAASSTSPSPSFRRLPITTTPPPAAPVSLFYAKSHPPKMDAENTKPNNSGTIKSFGHKILSAVNSPTPQSLNQTTPKHESQPEAPQISGSDVLRALQKA
        MWAASSTSP PS  RL ITT+ PP  P+S+F A S P   DAEN KPNNS +IK FGHKILSAVNSPTP+SLNQTTPKHES PEA QISGSDVLRALQKA
Subjt:  MWAASSTSPSPSFRRLPITTTPPPAAPVSLFYAKSHPPKMDAENTKPNNSGTIKSFGHKILSAVNSPTPQSLNQTTPKHESQPEAPQISGSDVLRALQKA

Query:  AAVKEKNRTQQVKEKKKKKKEGAATEDSYSEMNHRVRPLKIKRDWGLRLTQLEKRLLEMSEP
        AAVKEK RTQQVKE KKKKKEGAATEDS SEMNHRVRPLKI RDWGLRLTQLEKRLLE+S+P
Subjt:  AAVKEKNRTQQVKEKKKKKKEGAATEDSYSEMNHRVRPLKIKRDWGLRLTQLEKRLLEMSEP

A0A1S3CAW4 uncharacterized protein LOC1034987861.5e-81100Show/hide
Query:  MWAASSTSPSPSFRRLPITTTPPPAAPVSLFYAKSHPPKMDAENTKPNNSGTIKSFGHKILSAVNSPTPQSLNQTTPKHESQPEAPQISGSDVLRALQKA
        MWAASSTSPSPSFRRLPITTTPPPAAPVSLFYAKSHPPKMDAENTKPNNSGTIKSFGHKILSAVNSPTPQSLNQTTPKHESQPEAPQISGSDVLRALQKA
Subjt:  MWAASSTSPSPSFRRLPITTTPPPAAPVSLFYAKSHPPKMDAENTKPNNSGTIKSFGHKILSAVNSPTPQSLNQTTPKHESQPEAPQISGSDVLRALQKA

Query:  AAVKEKNRTQQVKEKKKKKKEGAATEDSYSEMNHRVRPLKIKRDWGLRLTQLEKRLLEMSEPG
        AAVKEKNRTQQVKEKKKKKKEGAATEDSYSEMNHRVRPLKIKRDWGLRLTQLEKRLLEMSEPG
Subjt:  AAVKEKNRTQQVKEKKKKKKEGAATEDSYSEMNHRVRPLKIKRDWGLRLTQLEKRLLEMSEPG

A0A5D3DMB8 Chaperone ClpB1.5e-81100Show/hide
Query:  MWAASSTSPSPSFRRLPITTTPPPAAPVSLFYAKSHPPKMDAENTKPNNSGTIKSFGHKILSAVNSPTPQSLNQTTPKHESQPEAPQISGSDVLRALQKA
        MWAASSTSPSPSFRRLPITTTPPPAAPVSLFYAKSHPPKMDAENTKPNNSGTIKSFGHKILSAVNSPTPQSLNQTTPKHESQPEAPQISGSDVLRALQKA
Subjt:  MWAASSTSPSPSFRRLPITTTPPPAAPVSLFYAKSHPPKMDAENTKPNNSGTIKSFGHKILSAVNSPTPQSLNQTTPKHESQPEAPQISGSDVLRALQKA

Query:  AAVKEKNRTQQVKEKKKKKKEGAATEDSYSEMNHRVRPLKIKRDWGLRLTQLEKRLLEMSEPG
        AAVKEKNRTQQVKEKKKKKKEGAATEDSYSEMNHRVRPLKIKRDWGLRLTQLEKRLLEMSEPG
Subjt:  AAVKEKNRTQQVKEKKKKKKEGAATEDSYSEMNHRVRPLKIKRDWGLRLTQLEKRLLEMSEPG

A0A6J1H4Y8 uncharacterized protein LOC1114604381.9e-4165.24Show/hide
Query:  MWAASSTSPSPSFRRLPITTTPPPAAPVSLFYAKSHPPKMDAENTKPNNSGTIKSFGHKILSAVNSPTPQSLNQTTPKHESQPEAPQISGSDVLRALQKA
        MW A STSPSPS  RLP+ T PPP  PVS  YAK+ PP+ DA+N  PNNS +IKSFGHKILSA NS  P+S      K ESQ E  QISG DVLRALQKA
Subjt:  MWAASSTSPSPSFRRLPITTTPPPAAPVSLFYAKSHPPKMDAENTKPNNSGTIKSFGHKILSAVNSPTPQSLNQTTPKHESQPEAPQISGSDVLRALQKA

Query:  AAVKEKNRTQQVKEKKK---KKKEGAATEDSYSEMNHRVRPLKIKRDWGLRLTQLEKRLLEMSE
        AAVKEKNRT+Q KE+KK      EG+ +++  SEMN RVRPL+IK DWGLRLT+LEKRL E+SE
Subjt:  AAVKEKNRTQQVKEKKK---KKKEGAATEDSYSEMNHRVRPLKIKRDWGLRLTQLEKRLLEMSE

A0A6J1L2U1 uncharacterized protein LOC1114993292.2e-4064.63Show/hide
Query:  MWAASSTSPSPSFRRLPITTTPPPAAPVSLFYAKSHPPKMDAENTKPNNSGTIKSFGHKILSAVNSPTPQSLNQTTPKHESQPEAPQISGSDVLRALQKA
        MWAA STSPSPS  RLP+ T P P  PVS  YAK+ PP  DA+N  PNNS +IKSFGHKILSA  S  P+S      K ESQ E  +ISG DVLRALQKA
Subjt:  MWAASSTSPSPSFRRLPITTTPPPAAPVSLFYAKSHPPKMDAENTKPNNSGTIKSFGHKILSAVNSPTPQSLNQTTPKHESQPEAPQISGSDVLRALQKA

Query:  AAVKEKNRTQQVKEKKK---KKKEGAATEDSYSEMNHRVRPLKIKRDWGLRLTQLEKRLLEMSE
        AAVKEKNRT+QVKE+KK      EG+ +++  SEMN RVRPL+IK DWGLRLT+LEKRL E+SE
Subjt:  AAVKEKNRTQQVKEKKK---KKKEGAATEDSYSEMNHRVRPLKIKRDWGLRLTQLEKRLLEMSE

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT2G46735.1 unknown protein6.5e-0529.94Show/hide
Query:  LPITTTPPPAAPVSLFYAKSHPPKMDAEN-------TKPNNSGTIKSFGHKILSAVNSPTPQSLNQTTPKHESQPEAPQISGSDVLRALQKAAAVKEKNR
        +P+     P    S+ Y++  P   D  +       TK   S ++   G +IL       P+         +  P+  +ISGSDVL A+Q+A A  ++ R
Subjt:  LPITTTPPPAAPVSLFYAKSHPPKMDAEN-------TKPNNSGTIKSFGHKILSAVNSPTPQSLNQTTPKHESQPEAPQISGSDVLRALQKAAAVKEKNR

Query:  TQQVKEKKKKKKEGAATEDSYSEMN-------HRVRPLKIKRDWGLRLTQLEKRLLE
        T   K+K K +  G     S  E           V PL+IK DWG RL + EK L E
Subjt:  TQQVKEKKKKKKEGAATEDSYSEMN-------HRVRPLKIKRDWGLRLTQLEKRLLE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTGGGCTGCCTCTTCCACCTCACCTAGCCCCTCGTTCCGCCGCCTCCCCATCACAACCACTCCTCCGCCCGCCGCTCCGGTCTCCCTCTTCTACGCAAAGTCCCACCC
CCCCAAAATGGACGCTGAAAACACCAAACCAAACAACAGTGGCACCATCAAAAGCTTTGGCCACAAAATTCTCTCAGCCGTGAACTCCCCAACTCCCCAATCCCTTAACC
AAACGACCCCGAAACACGAATCCCAACCGGAGGCTCCCCAAATTAGTGGGTCCGATGTTCTAAGGGCACTGCAGAAGGCGGCTGCCGTGAAGGAGAAGAACAGAACCCAA
CAAGTTAAAGAGAAGAAGAAGAAGAAGAAAGAAGGGGCTGCCACCGAAGACAGTTACTCTGAGATGAACCATAGAGTGAGGCCTCTTAAGATCAAGAGAGATTGGGGATT
GAGGCTCACCCAATTGGAAAAACGCCTTCTGGAAATGTCTGAGCCGGGTTGA
mRNA sequenceShow/hide mRNA sequence
CTTCATTCATTATTTTCCCGAATTCCCCAACTCCAAACGATGTGGGCTGCCTCTTCCACCTCACCTAGCCCCTCGTTCCGCCGCCTCCCCATCACAACCACTCCTCCGCC
CGCCGCTCCGGTCTCCCTCTTCTACGCAAAGTCCCACCCCCCCAAAATGGACGCTGAAAACACCAAACCAAACAACAGTGGCACCATCAAAAGCTTTGGCCACAAAATTC
TCTCAGCCGTGAACTCCCCAACTCCCCAATCCCTTAACCAAACGACCCCGAAACACGAATCCCAACCGGAGGCTCCCCAAATTAGTGGGTCCGATGTTCTAAGGGCACTG
CAGAAGGCGGCTGCCGTGAAGGAGAAGAACAGAACCCAACAAGTTAAAGAGAAGAAGAAGAAGAAGAAAGAAGGGGCTGCCACCGAAGACAGTTACTCTGAGATGAACCA
TAGAGTGAGGCCTCTTAAGATCAAGAGAGATTGGGGATTGAGGCTCACCCAATTGGAAAAACGCCTTCTGGAAATGTCTGAGCCGGGTTGATGATTCTTATTTGGATTGT
CATTGATTTGTATATTCATATGTTGCGTTTCTGTATGTTCAATTCCAAGTAAAATGGCAAATTTTTCATATTTTTGGTACTTTCCCTGATATTCACAACGTTCTGTAAAT
GATGTCTGTAGTAGTAAAGAAATG
Protein sequenceShow/hide protein sequence
MWAASSTSPSPSFRRLPITTTPPPAAPVSLFYAKSHPPKMDAENTKPNNSGTIKSFGHKILSAVNSPTPQSLNQTTPKHESQPEAPQISGSDVLRALQKAAAVKEKNRTQ
QVKEKKKKKKEGAATEDSYSEMNHRVRPLKIKRDWGLRLTQLEKRLLEMSEPG