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IVF0003045 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0003045
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionGBBH-like_N domain-containing protein
Genome locationchr06:13371096..13387456
RNA-Seq ExpressionIVF0003045
SyntenyIVF0003045
Gene Ontology termsGO:0046872 - metal ion binding (molecular function)
InterPro domainsIPR010376 - Gamma-butyrobetaine hydroxylase-like, N-terminal
IPR038492 - GBBH-like, N-terminal domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_008450051.1 PREDICTED: uncharacterized protein LOC103491759 isoform X1 [Cucumis melo]3.41e-69100Show/hide
Query:  MGNNSERVRLEERKELIICRETMLPLNRLFRTIHTTLNAPQITTFALHAPKYVEVKFADGSVFNLSAEFLRIYSPAADAKVRSIGGEKVIFGRRHVGIMS
        MGNNSERVRLEERKELIICRETMLPLNRLFRTIHTTLNAPQITTFALHAPKYVEVKFADGSVFNLSAEFLRIYSPAADAKVRSIGGEKVIFGRRHVGIMS
Subjt:  MGNNSERVRLEERKELIICRETMLPLNRLFRTIHTTLNAPQITTFALHAPKYVEVKFADGSVFNLSAEFLRIYSPAADAKVRSIGGEKVIFGRRHVGIMS

Query:  AEPVGNYG
        AEPVGNYG
Subjt:  AEPVGNYG

XP_008450052.1 PREDICTED: uncharacterized protein LOC103491759 isoform X2 [Cucumis melo]6.48e-73100Show/hide
Query:  MGNNSERVRLEERKELIICRETMLPLNRLFRTIHTTLNAPQITTFALHAPKYVEVKFADGSVFNLSAEFLRIYSPAADAKVRSIGGEKVIFGRRHVGIMS
        MGNNSERVRLEERKELIICRETMLPLNRLFRTIHTTLNAPQITTFALHAPKYVEVKFADGSVFNLSAEFLRIYSPAADAKVRSIGGEKVIFGRRHVGIMS
Subjt:  MGNNSERVRLEERKELIICRETMLPLNRLFRTIHTTLNAPQITTFALHAPKYVEVKFADGSVFNLSAEFLRIYSPAADAKVRSIGGEKVIFGRRHVGIMS

Query:  AEPVGNYGDPF
        AEPVGNYGDPF
Subjt:  AEPVGNYGDPF

XP_023528840.1 uncharacterized protein LOC111791650 isoform X1 [Cucurbita pepo subsp. pepo]1.38e-5089.13Show/hide
Query:  RETMLPLNRLFRTIHTTLNAPQITTFALHAPKYVEVKFADGSVFNLSAEFLRIYSPAADAKVRSIGGEKVIFGRRHVGIMSAEPVGNYGDPF
        RETML L R FRTIHTT++APQIT+FAL APKYVEVKFADGSVFNLSAEFLR+YSPAADAKVRSIGGEKVI GRRHV IMSAEPVGNYGDPF
Subjt:  RETMLPLNRLFRTIHTTLNAPQITTFALHAPKYVEVKFADGSVFNLSAEFLRIYSPAADAKVRSIGGEKVIFGRRHVGIMSAEPVGNYGDPF

XP_031737737.1 uncharacterized protein LOC101219823 isoform X1 [Cucumis sativus]2.97e-6191.59Show/hide
Query:  GNNSERVRLEERKELIICRETMLPLNRLFRTIHTTLNAPQITTFALHAPKYVEVKFADGSVFNLSAEFLRIYSPAADAKVRSIGGEKVIFGRRHVGIMSA
        GNN ERV LEERKELI CRE MLPL+RLFRTIHTTL+APQITTFALHAPKYVEVKFADGSVFNLSAEFLR+YSPAADAK+RSIGGEKVI GRRHVGIMSA
Subjt:  GNNSERVRLEERKELIICRETMLPLNRLFRTIHTTLNAPQITTFALHAPKYVEVKFADGSVFNLSAEFLRIYSPAADAKVRSIGGEKVIFGRRHVGIMSA

Query:  EPVGNYG
        EPVGNYG
Subjt:  EPVGNYG

XP_031737738.1 uncharacterized protein LOC101219823 isoform X2 [Cucumis sativus]5.89e-6591.82Show/hide
Query:  GNNSERVRLEERKELIICRETMLPLNRLFRTIHTTLNAPQITTFALHAPKYVEVKFADGSVFNLSAEFLRIYSPAADAKVRSIGGEKVIFGRRHVGIMSA
        GNN ERV LEERKELI CRE MLPL+RLFRTIHTTL+APQITTFALHAPKYVEVKFADGSVFNLSAEFLR+YSPAADAK+RSIGGEKVI GRRHVGIMSA
Subjt:  GNNSERVRLEERKELIICRETMLPLNRLFRTIHTTLNAPQITTFALHAPKYVEVKFADGSVFNLSAEFLRIYSPAADAKVRSIGGEKVIFGRRHVGIMSA

Query:  EPVGNYGDPF
        EPVGNYGDPF
Subjt:  EPVGNYGDPF

TrEMBL top hitse value%identityAlignment
A0A1S3BND6 uncharacterized protein LOC103491759 isoform X22.8e-55100Show/hide
Query:  MGNNSERVRLEERKELIICRETMLPLNRLFRTIHTTLNAPQITTFALHAPKYVEVKFADGSVFNLSAEFLRIYSPAADAKVRSIGGEKVIFGRRHVGIMS
        MGNNSERVRLEERKELIICRETMLPLNRLFRTIHTTLNAPQITTFALHAPKYVEVKFADGSVFNLSAEFLRIYSPAADAKVRSIGGEKVIFGRRHVGIMS
Subjt:  MGNNSERVRLEERKELIICRETMLPLNRLFRTIHTTLNAPQITTFALHAPKYVEVKFADGSVFNLSAEFLRIYSPAADAKVRSIGGEKVIFGRRHVGIMS

Query:  AEPVGNYGDPF
        AEPVGNYGDPF
Subjt:  AEPVGNYGDPF

A0A1S3BNF3 uncharacterized protein LOC103491759 isoform X14.4e-53100Show/hide
Query:  MGNNSERVRLEERKELIICRETMLPLNRLFRTIHTTLNAPQITTFALHAPKYVEVKFADGSVFNLSAEFLRIYSPAADAKVRSIGGEKVIFGRRHVGIMS
        MGNNSERVRLEERKELIICRETMLPLNRLFRTIHTTLNAPQITTFALHAPKYVEVKFADGSVFNLSAEFLRIYSPAADAKVRSIGGEKVIFGRRHVGIMS
Subjt:  MGNNSERVRLEERKELIICRETMLPLNRLFRTIHTTLNAPQITTFALHAPKYVEVKFADGSVFNLSAEFLRIYSPAADAKVRSIGGEKVIFGRRHVGIMS

Query:  AEPVGNYG
        AEPVGNYG
Subjt:  AEPVGNYG

A0A6J1F4E2 uncharacterized protein LOC111442002 isoform X25.8e-3788.76Show/hide
Query:  MLPLNRLFRTIHTTLNAPQITTFALHAPKYVEVKFADGSVFNLSAEFLRIYSPAADAKVRSIGGEKVIFGRRHVGIMSAEPVGNYGDPF
        ML L R FRTIHTT++APQ+T+FAL APKYVEVKFADGSVFNLSAEFLR+YSPAADAKVRSIGGEKVI GRRHVGIMSAEPVGNYGDPF
Subjt:  MLPLNRLFRTIHTTLNAPQITTFALHAPKYVEVKFADGSVFNLSAEFLRIYSPAADAKVRSIGGEKVIFGRRHVGIMSAEPVGNYGDPF

A0A6J1F9C8 uncharacterized protein LOC111442002 isoform X11.2e-3488.37Show/hide
Query:  MLPLNRLFRTIHTTLNAPQITTFALHAPKYVEVKFADGSVFNLSAEFLRIYSPAADAKVRSIGGEKVIFGRRHVGIMSAEPVGNYG
        ML L R FRTIHTT++APQ+T+FAL APKYVEVKFADGSVFNLSAEFLR+YSPAADAKVRSIGGEKVI GRRHVGIMSAEPVGNYG
Subjt:  MLPLNRLFRTIHTTLNAPQITTFALHAPKYVEVKFADGSVFNLSAEFLRIYSPAADAKVRSIGGEKVIFGRRHVGIMSAEPVGNYG

A0A6J1J985 uncharacterized protein LOC111482460 isoform X27.5e-3788.76Show/hide
Query:  MLPLNRLFRTIHTTLNAPQITTFALHAPKYVEVKFADGSVFNLSAEFLRIYSPAADAKVRSIGGEKVIFGRRHVGIMSAEPVGNYGDPF
        ML L+R FRTIHTT+++PQIT+FAL APKYVEVKFADGSVFNLSAEFLR+YSPAADAKVRSIGGEKVI GRRHVGIMSAEPVGNYGDPF
Subjt:  MLPLNRLFRTIHTTLNAPQITTFALHAPKYVEVKFADGSVFNLSAEFLRIYSPAADAKVRSIGGEKVIFGRRHVGIMSAEPVGNYGDPF

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G27340.1 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: oxidation reduction; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Gamma-butyrobetaine dioxygenase/Trimethyllysine dioxygenase, N-terminal (InterPro:IPR010376); Has 1035 Blast hits to 1035 proteins in 399 species: Archae - 0; Bacteria - 765; Metazoa - 0; Fungi - 0; Plants - 39; Viruses - 0; Other Eukaryotes - 231 (source: NCBI BLink).2.5e-2466.25Show/hide
Query:  RTIHTT--LNAPQITTFALHAPKYVEVKFADGSVFNLSAEFLRIYSPAADAKVRSIGGEKVIFGRRHVGIMSAEPVGNYG
        R +H T  +  P+++ F++ +PK VEV++ADG+ FN S+EFLRI+SPAAD KVRSIGGEKVI GRR+VGIMSAEPVGNYG
Subjt:  RTIHTT--LNAPQITTFALHAPKYVEVKFADGSVFNLSAEFLRIYSPAADAKVRSIGGEKVIFGRRHVGIMSAEPVGNYG

AT3G27340.2 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: oxidation reduction; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Gamma-butyrobetaine dioxygenase/Trimethyllysine dioxygenase, N-terminal (InterPro:IPR010376); Has 693 Blast hits to 693 proteins in 282 species: Archae - 0; Bacteria - 530; Metazoa - 0; Fungi - 0; Plants - 39; Viruses - 0; Other Eukaryotes - 124 (source: NCBI BLink).2.5e-2466.25Show/hide
Query:  RTIHTT--LNAPQITTFALHAPKYVEVKFADGSVFNLSAEFLRIYSPAADAKVRSIGGEKVIFGRRHVGIMSAEPVGNYG
        R +H T  +  P+++ F++ +PK VEV++ADG+ FN S+EFLRI+SPAAD KVRSIGGEKVI GRR+VGIMSAEPVGNYG
Subjt:  RTIHTT--LNAPQITTFALHAPKYVEVKFADGSVFNLSAEFLRIYSPAADAKVRSIGGEKVIFGRRHVGIMSAEPVGNYG

AT3G27340.3 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: oxidation reduction; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Gamma-butyrobetaine dioxygenase/Trimethyllysine dioxygenase, N-terminal (InterPro:IPR010376); Has 945 Blast hits to 945 proteins in 390 species: Archae - 0; Bacteria - 710; Metazoa - 0; Fungi - 0; Plants - 39; Viruses - 0; Other Eukaryotes - 196 (source: NCBI BLink).2.5e-2466.25Show/hide
Query:  RTIHTT--LNAPQITTFALHAPKYVEVKFADGSVFNLSAEFLRIYSPAADAKVRSIGGEKVIFGRRHVGIMSAEPVGNYG
        R +H T  +  P+++ F++ +PK VEV++ADG+ FN S+EFLRI+SPAAD KVRSIGGEKVI GRR+VGIMSAEPVGNYG
Subjt:  RTIHTT--LNAPQITTFALHAPKYVEVKFADGSVFNLSAEFLRIYSPAADAKVRSIGGEKVIFGRRHVGIMSAEPVGNYG


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGAAACAACAGTGAGCGAGTGAGGCTCGAGGAAAGGAAGGAGCTCATCATATGCAGAGAAACCATGTTGCCTTTGAACAGACTTTTCCGGACGATCCATACAACCCT
CAATGCTCCTCAAATTACCACGTTCGCTCTTCACGCCCCCAAATATGTAGAGGTTAAATTTGCAGATGGAAGTGTGTTCAACTTGTCGGCTGAGTTCTTGAGAATATATA
GTCCAGCTGCTGATGCTAAAGTCCGGTCAATTGGAGGTGAGAAGGTAATATTTGGACGACGTCATGTCGGTATTATGTCTGCTGAACCAGTTGGGAACTATGGGGATCCT
TTTTGA
mRNA sequenceShow/hide mRNA sequence
CTCAAAATTCACCTGATTCGTAGGTACCTTGGACTGATCGGCCCATGGGAAACAACAGTGAGCGAGTGAGGCTCGAGGAAAGGAAGGAGCTCATCATATGCAGAGAAACC
ATGTTGCCTTTGAACAGACTTTTCCGGACGATCCATACAACCCTCAATGCTCCTCAAATTACCACGTTCGCTCTTCACGCCCCCAAATATGTAGAGGTTAAATTTGCAGA
TGGAAGTGTGTTCAACTTGTCGGCTGAGTTCTTGAGAATATATAGTCCAGCTGCTGATGCTAAAGTCCGGTCAATTGGAGGTGAGAAGGTAATATTTGGACGACGTCATG
TCGGTATTATGTCTGCTGAACCAGTTGGGAACTATGGGGATCCTTTTTGACGATTTGCATAGAACTGGGATCTATTCGTGGGATTATTTCTATCATCTTGGGAGCAACAA
ATTTACTCTCTTGAGAAATTATGTTAAAACACTGAAGAAGCATGGGCTGAGCCGAGATCCACCAAAGAGAAAATGATGGACAAATCAATTGTCTCCAACCACGAGCATCG
TGTGCAAGATAATCATGAGTGTTTGGGTCAACTGACAAACTCCTTAAAGAAATCGTGCAACAATTAGATGGGTTTGAAAAAAGAAGGCAGGTTGAAAAAAGGCAAGTTGT
CTCAGCACTAGCTGATGAAAAAGATTGAATTGTTATACTAGGCAACGAAAATAATTTTCCTAGTTTTCTGTTTCAAATTTTACCTATAAGTTATATGCTTCTAAGAGCCT
GAGCGTGAAAAATGGACATGTTGCTGTAGCTCCTTGGTAGATTATCTAATGAATCGAGTTAAATTACCATTTCAGTGGTT
Protein sequenceShow/hide protein sequence
MGNNSERVRLEERKELIICRETMLPLNRLFRTIHTTLNAPQITTFALHAPKYVEVKFADGSVFNLSAEFLRIYSPAADAKVRSIGGEKVIFGRRHVGIMSAEPVGNYGDP
F