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IVF0003050 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0003050
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionKirola-like
Genome locationchr07:9175946..9176335
RNA-Seq ExpressionIVF0003050
SyntenyIVF0003050
Gene Ontology termsGO:0006259 - DNA metabolic process (biological process)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0041479.1 UBN2_3 domain-containing protein [Cucumis melo var. makuwa]2.86e-0738.84Show/hide
Query:  MVSEWDIQHTLE---DTTSNGNQTEEIATSFSTTVAAVVDAHISATYGQMVSLPSNNTGKCITVNSVVACGVKHASRVAANLHVLPSDLHVTVAGATCIG
        MVSE DI++TLE   +TT++GNQTEE   SFS  VAA VDA IS T  +        +      N         +S      H  P D      G T +G
Subjt:  MVSEWDIQHTLE---DTTSNGNQTEEIATSFSTTVAAVVDAHISATYGQMVSLPSNNTGKCITVNSVVACGVKHASRVAANLHVLPSDLHVTVAGATCIG

Query:  PSSYS-FDHPIFATLFFIYSL
        PSS    + PI  TLFFI+ +
Subjt:  PSSYS-FDHPIFATLFFIYSL

KAA0048290.1 reverse transcriptase [Cucumis melo var. makuwa]1.02e-0465.22Show/hide
Query:  MVSEWDIQHTLEDTTSNGNQTEEIATSFSTTVAAVVDAHISATYGQ
        MVSE DI+ TLEDTTS+GNQTEE A +F    AAVV+A ISAT  +
Subjt:  MVSEWDIQHTLEDTTSNGNQTEEIATSFSTTVAAVVDAHISATYGQ

TYJ97028.1 uncharacterized protein E5676_scaffold506G00880 [Cucumis melo var. makuwa]2.59e-0457.69Show/hide
Query:  MVSEWDIQHTLEDTTSNGNQTEEIATSFSTTVAAVVDAHISATY--GQMVSL
        MVSE +I  TL +TTS+GNQT+  A SFS  VAA VDA I+A    G  VSL
Subjt:  MVSEWDIQHTLEDTTSNGNQTEEIATSFSTTVAAVVDAHISATY--GQMVSL

TYK03082.1 Beta-galactosidase [Cucumis melo var. makuwa]2.36e-0438.98Show/hide
Query:  MVSEWDIQHTLEDTTSNGNQTEEIATSFSTTVAAVVDAHISATYGQMVSLPSNNTGKCITVNSVVACGVKHASRVAANLHVLPSDLHVTVAGATCIGPS-
        MVSE DI+ TL +TTS+GNQT+  ATSFST VAA VDA  +    + +       G  I  N + +              VL    H    GAT  G S 
Subjt:  MVSEWDIQHTLEDTTSNGNQTEEIATSFSTTVAAVVDAHISATYGQMVSLPSNNTGKCITVNSVVACGVKHASRVAANLHVLPSDLHVTVAGATCIGPS-

Query:  SYSFDHPIFATLFFIYSL
        S +   P  ATL FI  L
Subjt:  SYSFDHPIFATLFFIYSL

TYK28631.1 kirola-like [Cucumis melo var. makuwa]8.35e-58100Show/hide
Query:  MVSEWDIQHTLEDTTSNGNQTEEIATSFSTTVAAVVDAHISATYGQMVSLPSNNTGKCITVNSVVACGVKHASRVAANLHVLPSDLHVTVAGATCI
        MVSEWDIQHTLEDTTSNGNQTEEIATSFSTTVAAVVDAHISATYGQMVSLPSNNTGKCITVNSVVACGVKHASRVAANLHVLPSDLHVTVAGATCI
Subjt:  MVSEWDIQHTLEDTTSNGNQTEEIATSFSTTVAAVVDAHISATYGQMVSLPSNNTGKCITVNSVVACGVKHASRVAANLHVLPSDLHVTVAGATCI

TrEMBL top hitse value%identityAlignment
A0A5A7TJD7 UBN2_3 domain-containing protein2.3e-0538.84Show/hide
Query:  MVSEWDIQHTL---EDTTSNGNQTEEIATSFSTTVAAVVDAHISATYGQMVSLPSNNTGKCITVNSVVACGVKHASRVAANLHVLPSDLHVTVAGATCIG
        MVSE DI++TL   E+TT++GNQTEE   SFS  VAA VDA IS T  +        +      N         +S      H  P D      G T +G
Subjt:  MVSEWDIQHTL---EDTTSNGNQTEEIATSFSTTVAAVVDAHISATYGQMVSLPSNNTGKCITVNSVVACGVKHASRVAANLHVLPSDLHVTVAGATCIG

Query:  PSSY-SFDHPIFATLFFIYSL
        PSS    + PI  TLFFI+ +
Subjt:  PSSY-SFDHPIFATLFFIYSL

A0A5D3DYG3 Kirola-like1.9e-44100Show/hide
Query:  MVSEWDIQHTLEDTTSNGNQTEEIATSFSTTVAAVVDAHISATYGQMVSLPSNNTGKCITVNSVVACGVKHASRVAANLHVLPSDLHVTVAGATCI
        MVSEWDIQHTLEDTTSNGNQTEEIATSFSTTVAAVVDAHISATYGQMVSLPSNNTGKCITVNSVVACGVKHASRVAANLHVLPSDLHVTVAGATCI
Subjt:  MVSEWDIQHTLEDTTSNGNQTEEIATSFSTTVAAVVDAHISATYGQMVSLPSNNTGKCITVNSVVACGVKHASRVAANLHVLPSDLHVTVAGATCI

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTATCAGAGTGGGACATTCAACATACTCTAGAAGACACAACCAGTAATGGAAATCAAACAGAGGAGATAGCCACTAGCTTTAGCACCACTGTCGCCGCCGTCGTTGA
TGCTCATATTAGTGCTACCTATGGACAAATGGTTTCTCTGCCTTCAAACAACACCGGCAAGTGCATTACCGTCAATTCTGTAGTCGCCTGCGGCGTCAAACATGCCTCAC
GCGTCGCTGCAAACCTCCACGTGCTGCCGTCGGACCTCCATGTGACCGTTGCTGGAGCTACATGCATCGGTCCTTCCTCATACAGTTTCGACCATCCCATCTTTGCAACC
CTTTTCTTCATCTACAGCCTATATCGTTCCCCACGCCCCGATTCGTGTTCTGCCACCTAA
mRNA sequenceShow/hide mRNA sequence
ATGGTATCAGAGTGGGACATTCAACATACTCTAGAAGACACAACCAGTAATGGAAATCAAACAGAGGAGATAGCCACTAGCTTTAGCACCACTGTCGCCGCCGTCGTTGA
TGCTCATATTAGTGCTACCTATGGACAAATGGTTTCTCTGCCTTCAAACAACACCGGCAAGTGCATTACCGTCAATTCTGTAGTCGCCTGCGGCGTCAAACATGCCTCAC
GCGTCGCTGCAAACCTCCACGTGCTGCCGTCGGACCTCCATGTGACCGTTGCTGGAGCTACATGCATCGGTCCTTCCTCATACAGTTTCGACCATCCCATCTTTGCAACC
CTTTTCTTCATCTACAGCCTATATCGTTCCCCACGCCCCGATTCGTGTTCTGCCACCTAA
Protein sequenceShow/hide protein sequence
MVSEWDIQHTLEDTTSNGNQTEEIATSFSTTVAAVVDAHISATYGQMVSLPSNNTGKCITVNSVVACGVKHASRVAANLHVLPSDLHVTVAGATCIGPSSYSFDHPIFAT
LFFIYSLYRSPRPDSCSAT