; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

IVF0003071 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0003071
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionPol protein
Genome locationchr04:11354503..11354748
RNA-Seq ExpressionIVF0003071
SyntenyIVF0003071
Gene Ontology termsGO:0015074 - DNA integration (biological process)
GO:0003676 - nucleic acid binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0031845.1 pol protein [Cucumis melo var. makuwa]1.07e-4397.47Show/hide
Query:  MGPELVQSTNEAIQKIRSRMHTAQSRQKSYADVRRKDLEFEVGDKVFLKVAPMRGVLRFERRGKLSPRFVGSFEILERI
        MGPELVQSTNEAIQKIRSRMHTAQSRQKSYADVRRKDLEFEVGDKVFLKVAPMRGVLRFERRGKL+PRFVG FEILERI
Subjt:  MGPELVQSTNEAIQKIRSRMHTAQSRQKSYADVRRKDLEFEVGDKVFLKVAPMRGVLRFERRGKLSPRFVGSFEILERI
KAA0034871.1 pol protein [Cucumis melo var. makuwa]1.07e-4397.47Show/hide
Query:  MGPELVQSTNEAIQKIRSRMHTAQSRQKSYADVRRKDLEFEVGDKVFLKVAPMRGVLRFERRGKLSPRFVGSFEILERI
        MGPELVQSTNEAIQKIRSRMHTAQSRQKSYADVRRKDLEFEVGDKVFLKVAPMRGV+RFERRGKLSPRFVG FEILERI
Subjt:  MGPELVQSTNEAIQKIRSRMHTAQSRQKSYADVRRKDLEFEVGDKVFLKVAPMRGVLRFERRGKLSPRFVGSFEILERI
KAA0045567.1 pol protein [Cucumis melo var. makuwa]4.01e-45100Show/hide
Query:  MGPELVQSTNEAIQKIRSRMHTAQSRQKSYADVRRKDLEFEVGDKVFLKVAPMRGVLRFERRGKLSPRFVGSFEILERI
        MGPELVQSTNEAIQKIRSRMHTAQSRQKSYADVRRKDLEFEVGDKVFLKVAPMRGVLRFERRGKLSPRFVGSFEILERI
Subjt:  MGPELVQSTNEAIQKIRSRMHTAQSRQKSYADVRRKDLEFEVGDKVFLKVAPMRGVLRFERRGKLSPRFVGSFEILERI
KAA0051723.1 pol protein [Cucumis melo var. makuwa]7.18e-4598.73Show/hide
Query:  MGPELVQSTNEAIQKIRSRMHTAQSRQKSYADVRRKDLEFEVGDKVFLKVAPMRGVLRFERRGKLSPRFVGSFEILERI
        MGPELVQSTNEAIQKIRSRMHTAQSRQKSYADVRRKDLEFEVGDKVFLKVAPMRGVLRFERRGKLSPRFVG FEILERI
Subjt:  MGPELVQSTNEAIQKIRSRMHTAQSRQKSYADVRRKDLEFEVGDKVFLKVAPMRGVLRFERRGKLSPRFVGSFEILERI
KAA0065333.1 pol protein [Cucumis melo var. makuwa]6.32e-45100Show/hide
Query:  MGPELVQSTNEAIQKIRSRMHTAQSRQKSYADVRRKDLEFEVGDKVFLKVAPMRGVLRFERRGKLSPRFVGSFEILERI
        MGPELVQSTNEAIQKIRSRMHTAQSRQKSYADVRRKDLEFEVGDKVFLKVAPMRGVLRFERRGKLSPRFVGSFEILERI
Subjt:  MGPELVQSTNEAIQKIRSRMHTAQSRQKSYADVRRKDLEFEVGDKVFLKVAPMRGVLRFERRGKLSPRFVGSFEILERI
TrEMBL top hitse value%identityAlignment
A0A5A7TB42 Reverse transcriptase2.6e-34100Show/hide
Query:  MGPELVQSTNEAIQKIRSRMHTAQSRQKSYADVRRKDLEFEVGDKVFLKVAPMRGVLRFERRGKLSPRFVGSFEILERI
        MGPELVQSTNEAIQKIRSRMHTAQSRQKSYADVRRKDLEFEVGDKVFLKVAPMRGVLRFERRGKLSPRFVGSFEILERI
Subjt:  MGPELVQSTNEAIQKIRSRMHTAQSRQKSYADVRRKDLEFEVGDKVFLKVAPMRGVLRFERRGKLSPRFVGSFEILERI
A0A5A7TUR3 Pol protein2.6e-34100Show/hide
Query:  MGPELVQSTNEAIQKIRSRMHTAQSRQKSYADVRRKDLEFEVGDKVFLKVAPMRGVLRFERRGKLSPRFVGSFEILERI
        MGPELVQSTNEAIQKIRSRMHTAQSRQKSYADVRRKDLEFEVGDKVFLKVAPMRGVLRFERRGKLSPRFVGSFEILERI
Subjt:  MGPELVQSTNEAIQKIRSRMHTAQSRQKSYADVRRKDLEFEVGDKVFLKVAPMRGVLRFERRGKLSPRFVGSFEILERI
A0A5A7TWK5 Ty3-gypsy retrotransposon protein9.7e-3498.73Show/hide
Query:  MGPELVQSTNEAIQKIRSRMHTAQSRQKSYADVRRKDLEFEVGDKVFLKVAPMRGVLRFERRGKLSPRFVGSFEILERI
        MGPELVQSTNEAIQKIRSRMHTAQSRQKSYADVRRKDLEFEVGDKVFLKVAPMRGVLRFERRGKLSPRFVG FEILERI
Subjt:  MGPELVQSTNEAIQKIRSRMHTAQSRQKSYADVRRKDLEFEVGDKVFLKVAPMRGVLRFERRGKLSPRFVGSFEILERI
A0A5A7V8X5 Pol protein9.7e-3498.73Show/hide
Query:  MGPELVQSTNEAIQKIRSRMHTAQSRQKSYADVRRKDLEFEVGDKVFLKVAPMRGVLRFERRGKLSPRFVGSFEILERI
        MGPELVQSTNEAIQKIRSRMHTAQSRQKSYADVRRKDLEFEVGDKVFLKVAPMRGVLRFERRGKLSPRFVG FEILERI
Subjt:  MGPELVQSTNEAIQKIRSRMHTAQSRQKSYADVRRKDLEFEVGDKVFLKVAPMRGVLRFERRGKLSPRFVGSFEILERI
A0A5A7VAY2 Pol protein2.6e-34100Show/hide
Query:  MGPELVQSTNEAIQKIRSRMHTAQSRQKSYADVRRKDLEFEVGDKVFLKVAPMRGVLRFERRGKLSPRFVGSFEILERI
        MGPELVQSTNEAIQKIRSRMHTAQSRQKSYADVRRKDLEFEVGDKVFLKVAPMRGVLRFERRGKLSPRFVGSFEILERI
Subjt:  MGPELVQSTNEAIQKIRSRMHTAQSRQKSYADVRRKDLEFEVGDKVFLKVAPMRGVLRFERRGKLSPRFVGSFEILERI
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGCCCTGAGTTAGTTCAGTCTACCAACGAAGCGATACAGAAGATTAGATCACGTATGCATACCGCTCAGAGTAGGCAGAAGAGTTATGCAGATGTGAGGCGGAAGGA
TCTTGAGTTTGAGGTAGGGGACAAGGTGTTCTTAAAGGTAGCACCTATGAGGGGTGTTTTACGATTTGAAAGGAGGGGAAAGCTGAGTCCCCGTTTTGTTGGGTCGTTTG
AGATTCTGGAGCGGATTGCCCTGTAG
mRNA sequenceShow/hide mRNA sequence
ATGGGCCCTGAGTTAGTTCAGTCTACCAACGAAGCGATACAGAAGATTAGATCACGTATGCATACCGCTCAGAGTAGGCAGAAGAGTTATGCAGATGTGAGGCGGAAGGA
TCTTGAGTTTGAGGTAGGGGACAAGGTGTTCTTAAAGGTAGCACCTATGAGGGGTGTTTTACGATTTGAAAGGAGGGGAAAGCTGAGTCCCCGTTTTGTTGGGTCGTTTG
AGATTCTGGAGCGGATTGCCCTGTAG
Protein sequenceShow/hide protein sequence
MGPELVQSTNEAIQKIRSRMHTAQSRQKSYADVRRKDLEFEVGDKVFLKVAPMRGVLRFERRGKLSPRFVGSFEILERIAL