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IVF0003081 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0003081
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionPhosphopantothenoylcysteine decarboxylase subunit VHS3-like
Genome locationchr05:10018565..10018873
RNA-Seq ExpressionIVF0003081
SyntenyIVF0003081
Gene Ontology termsGO:0005488 - binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0037362.1 phosphopantothenoylcysteine decarboxylase subunit VHS3-like [Cucumis melo var. makuwa]6.20e-1545.61Show/hide
Query:  EHMEEDDSIDFNHIKHEDDDSIDFNHIKHEDDDSIDSNHIEDEDGDPIDC----------------------------NCIEDEDDDPIDCDHIEDEDDD
        +H++EDD+ID        DD IDFN +K E DDSID + IEDED DPI C                            NC++DEDDDPI CD  EDE+D+
Subjt:  EHMEEDDSIDFNHIKHEDDDSIDFNHIKHEDDDSIDSNHIEDEDGDPIDC----------------------------NCIEDEDDDPIDCDHIEDEDDD

Query:  RLGYAALKIEMMII
         LG A LKI+MMI+
Subjt:  RLGYAALKIEMMII

KAA0039603.1 phosphopantothenoylcysteine decarboxylase subunit VHS3-like [Cucumis melo var. makuwa]2.36e-64100Show/hide
Query:  MEKRDYTNISTEHMEEDDSIDFNHIKHEDDDSIDFNHIKHEDDDSIDSNHIEDEDGDPIDCNCIEDEDDDPIDCDHIEDEDDDRLGYAALKIEMMIILVA
        MEKRDYTNISTEHMEEDDSIDFNHIKHEDDDSIDFNHIKHEDDDSIDSNHIEDEDGDPIDCNCIEDEDDDPIDCDHIEDEDDDRLGYAALKIEMMIILVA
Subjt:  MEKRDYTNISTEHMEEDDSIDFNHIKHEDDDSIDFNHIKHEDDDSIDSNHIEDEDGDPIDCNCIEDEDDDPIDCDHIEDEDDDRLGYAALKIEMMIILVA

Query:  LH
        LH
Subjt:  LH

KAA0050091.1 prostatic spermine-binding protein-like [Cucumis melo var. makuwa]1.82e-1567.8Show/hide
Query:  DSIDSNHIEDEDGDPIDCNCIEDEDDDPIDCDHIEDEDDDRLGYAALKIEMMIILVALH
        D I+ N I+DED D +DC+ IEDEDDDPIDCD  EDEDDD LG A LK+EMMI+  ALH
Subjt:  DSIDSNHIEDEDGDPIDCNCIEDEDDDPIDCDHIEDEDDDRLGYAALKIEMMIILVALH

XP_008456992.1 PREDICTED: phosphopantothenoylcysteine decarboxylase subunit VHS3-like [Cucumis melo]6.48e-2061.05Show/hide
Query:  EDDSIDFNHIKHEDDDSIDFNHIKHEDDDSID-----------SNHIEDEDGDPIDCNCIEDEDDDPIDCDHIEDEDDDRLGYAALKIEMMIILV
        +DD IDFN IK EDDDSIDF +I+ EDDDSID             +IEDED D IDC+ IED+DDDPI  D  EDEDDDRLG  ALK++MMI+ V
Subjt:  EDDSIDFNHIKHEDDDSIDFNHIKHEDDDSID-----------SNHIEDEDGDPIDCNCIEDEDDDPIDCDHIEDEDDDRLGYAALKIEMMIILV

XP_016902073.1 PREDICTED: phosphopantothenoylcysteine decarboxylase subunit VHS3-like [Cucumis melo]3.07e-60100Show/hide
Query:  MEKRDYTNISTEHMEEDDSIDFNHIKHEDDDSIDFNHIKHEDDDSIDSNHIEDEDGDPIDCNCIEDEDDDPIDCDHIEDEDDDRLGYAALKIEMMIIL
        MEKRDYTNISTEHMEEDDSIDFNHIKHEDDDSIDFNHIKHEDDDSIDSNHIEDEDGDPIDCNCIEDEDDDPIDCDHIEDEDDDRLGYAALKIEMMIIL
Subjt:  MEKRDYTNISTEHMEEDDSIDFNHIKHEDDDSIDFNHIKHEDDDSIDSNHIEDEDGDPIDCNCIEDEDDDPIDCDHIEDEDDDRLGYAALKIEMMIIL

TrEMBL top hitse value%identityAlignment
A0A1S3C4K1 phosphopantothenoylcysteine decarboxylase subunit VHS3-like4.8e-1461.05Show/hide
Query:  EDDSIDFNHIKHEDDDSIDFNHIKHEDDDSID-----------SNHIEDEDGDPIDCNCIEDEDDDPIDCDHIEDEDDDRLGYAALKIEMMIILV
        +DD IDFN IK EDDDSIDF +I+ EDDDSID             +IEDED D IDC+ IED+DDDPI  D  EDEDDDRLG  ALK++MMI+ V
Subjt:  EDDSIDFNHIKHEDDDSIDFNHIKHEDDDSID-----------SNHIEDEDGDPIDCNCIEDEDDDPIDCDHIEDEDDDRLGYAALKIEMMIILV

A0A1S4E1H3 phosphopantothenoylcysteine decarboxylase subunit VHS3-like4.0e-45100Show/hide
Query:  MEKRDYTNISTEHMEEDDSIDFNHIKHEDDDSIDFNHIKHEDDDSIDSNHIEDEDGDPIDCNCIEDEDDDPIDCDHIEDEDDDRLGYAALKIEMMIIL
        MEKRDYTNISTEHMEEDDSIDFNHIKHEDDDSIDFNHIKHEDDDSIDSNHIEDEDGDPIDCNCIEDEDDDPIDCDHIEDEDDDRLGYAALKIEMMIIL
Subjt:  MEKRDYTNISTEHMEEDDSIDFNHIKHEDDDSIDFNHIKHEDDDSIDSNHIEDEDGDPIDCNCIEDEDDDPIDCDHIEDEDDDRLGYAALKIEMMIIL

A0A5A7T1P1 Phosphopantothenoylcysteine decarboxylase subunit VHS3-like4.2e-1048.11Show/hide
Query:  EHMEEDDS-----IDFNHIKHEDDDSIDFNHIKHEDDDSIDSNHIEDED---------------GDPIDCNCIEDEDDDPIDCDHIEDEDDDRLGYAALK
        +H++EDD+     IDFN +K E DDSID + I+ EDDD I  +  ED+D                DPI  NC++DEDDDPI CD  EDE+D+ LG A LK
Subjt:  EHMEEDDS-----IDFNHIKHEDDDSIDFNHIKHEDDDSIDSNHIEDED---------------GDPIDCNCIEDEDDDPIDCDHIEDEDDDRLGYAALK

Query:  IEMMII
        I+MMI+
Subjt:  IEMMII

A0A5D3BPS5 Phosphopantothenoylcysteine decarboxylase subunit VHS3-like1.9e-47100Show/hide
Query:  MEKRDYTNISTEHMEEDDSIDFNHIKHEDDDSIDFNHIKHEDDDSIDSNHIEDEDGDPIDCNCIEDEDDDPIDCDHIEDEDDDRLGYAALKIEMMIILVA
        MEKRDYTNISTEHMEEDDSIDFNHIKHEDDDSIDFNHIKHEDDDSIDSNHIEDEDGDPIDCNCIEDEDDDPIDCDHIEDEDDDRLGYAALKIEMMIILVA
Subjt:  MEKRDYTNISTEHMEEDDSIDFNHIKHEDDDSIDFNHIKHEDDDSIDSNHIEDEDGDPIDCNCIEDEDDDPIDCDHIEDEDDDRLGYAALKIEMMIILVA

Query:  LH
        LH
Subjt:  LH

A0A5D3DQ88 Phosphopantothenoylcysteine decarboxylase subunit VHS3-like4.8e-1461.05Show/hide
Query:  EDDSIDFNHIKHEDDDSIDFNHIKHEDDDSID-----------SNHIEDEDGDPIDCNCIEDEDDDPIDCDHIEDEDDDRLGYAALKIEMMIILV
        +DD IDFN IK EDDDSIDF +I+ EDDDSID             +IEDED D IDC+ IED+DDDPI  D  EDEDDDRLG  ALK++MMI+ V
Subjt:  EDDSIDFNHIKHEDDDSIDFNHIKHEDDDSID-----------SNHIEDEDGDPIDCNCIEDEDDDPIDCDHIEDEDDDRLGYAALKIEMMIILV

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGAAGCGAGACTATACCAACATATCAACTGAACACATGGAAGAGGATGATTCTATCGACTTTAACCACATTAAACATGAAGATGATGATTCTATCGACTTTAACCA
CATTAAACATGAAGATGATGATTCTATCGACTCCAACCACATTGAAGATGAAGATGGTGATCCTATCGACTGCAACTGCATTGAAGATGAAGATGATGATCCTATCGACT
GCGACCACATTGAAGATGAAGATGATGATCGTCTTGGTTACGCCGCATTGAAGATAGAGATGATGATCATTTTGGTTGCGTTGCATTGA
mRNA sequenceShow/hide mRNA sequence
ATGGAGAAGCGAGACTATACCAACATATCAACTGAACACATGGAAGAGGATGATTCTATCGACTTTAACCACATTAAACATGAAGATGATGATTCTATCGACTTTAACCA
CATTAAACATGAAGATGATGATTCTATCGACTCCAACCACATTGAAGATGAAGATGGTGATCCTATCGACTGCAACTGCATTGAAGATGAAGATGATGATCCTATCGACT
GCGACCACATTGAAGATGAAGATGATGATCGTCTTGGTTACGCCGCATTGAAGATAGAGATGATGATCATTTTGGTTGCGTTGCATTGA
Protein sequenceShow/hide protein sequence
MEKRDYTNISTEHMEEDDSIDFNHIKHEDDDSIDFNHIKHEDDDSIDSNHIEDEDGDPIDCNCIEDEDDDPIDCDHIEDEDDDRLGYAALKIEMMIILVALH