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IVF0003090 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0003090
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionRetrotransposon protein
Genome locationchr07:16787432..16787710
RNA-Seq ExpressionIVF0003090
SyntenyIVF0003090
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0037008.1 subtilisin-like protease SBT3.17 isoform X1 [Cucumis melo var. makuwa]9.53e-2460Show/hide
Query:  ETVDIIRNVMEFVNDQLK-------------DKYDAKCMNQLQDILELSSGDRVRLMRIIMHSVQNMKAFLRIPNELKLEYCTVLLEDNA
        E V++IRN MEF+N+QLK             D+Y A+ + QLQDI ELSS  +V+LMRIIMHS Q+M+AFL IP ELKLEYCTVLLE+NA
Subjt:  ETVDIIRNVMEFVNDQLK-------------DKYDAKCMNQLQDILELSSGDRVRLMRIIMHSVQNMKAFLRIPNELKLEYCTVLLEDNA

KAA0059863.1 retrotransposon protein [Cucumis melo var. makuwa]9.42e-2965.22Show/hide
Query:  MVETVDIIRNVMEFVNDQLK-------------DKYDAKCMNQLQDILELSSGDRVRLMRIIMHSVQNMKAFLRIPNELKLEYCTVLLEDNA
        M ETV++I N MEFVND+LK             DKY  + + QLQDI EL+S DRVRLM+IIMHSV +MKAFLRIP ELKLEYCTVLLEDNA
Subjt:  MVETVDIIRNVMEFVNDQLK-------------DKYDAKCMNQLQDILELSSGDRVRLMRIIMHSVQNMKAFLRIPNELKLEYCTVLLEDNA

KAA0065601.1 retrotransposon protein [Cucumis melo var. makuwa]1.68e-1953.33Show/hide
Query:  ETVDIIRNVMEFVNDQLK-------------DKYDAKCMNQLQDILELSSGDRVRLMRIIMHSVQNMKAFLRIPNELKLEYCTVLLEDNA
        ETV II N +E+ N QLK             D   A+ M+QLQ I +LS+ DRVRL+ IIMH+V NM+AFL +P+ELKL+YCT +LEDNA
Subjt:  ETVDIIRNVMEFVNDQLK-------------DKYDAKCMNQLQDILELSSGDRVRLMRIIMHSVQNMKAFLRIPNELKLEYCTVLLEDNA

KAA0066604.1 retrotransposon protein [Cucumis melo var. makuwa]1.80e-1648.86Show/hide
Query:  ETVDIIRNVMEFVNDQLKD-------------KYDAKCMNQLQDILELSSGDRVRLMRIIMHSVQNMKAFLRIPNELKLEYCTVLLED
        ETV++IR+ MEF NDQLK              +  A+ + QLQ+ILEL S DR +LM+I+ HSV+ ++ FL IP ELKLEYC +LL++
Subjt:  ETVDIIRNVMEFVNDQLKD-------------KYDAKCMNQLQDILELSSGDRVRLMRIIMHSVQNMKAFLRIPNELKLEYCTVLLED

TYK07171.1 retrotransposon protein [Cucumis melo var. makuwa]1.68e-1953.33Show/hide
Query:  ETVDIIRNVMEFVNDQLK-------------DKYDAKCMNQLQDILELSSGDRVRLMRIIMHSVQNMKAFLRIPNELKLEYCTVLLEDNA
        ETV II N +E+ N QLK             D   A+ M+QLQ I +LS+ DRVRL+ IIMH+V NM+AFL +P+ELKL+YCT +LEDNA
Subjt:  ETVDIIRNVMEFVNDQLK-------------DKYDAKCMNQLQDILELSSGDRVRLMRIIMHSVQNMKAFLRIPNELKLEYCTVLLEDNA

TrEMBL top hitse value%identityAlignment
A0A5A7T2J7 Subtilisin-like protease SBT3.17 isoform X11.6e-1760Show/hide
Query:  ETVDIIRNVMEFVNDQLK-------------DKYDAKCMNQLQDILELSSGDRVRLMRIIMHSVQNMKAFLRIPNELKLEYCTVLLEDNA
        E V++IRN MEF+N+QLK             D+Y A+ + QLQDI ELSS  +V+LMRIIMHS Q+M+AFL IP ELKLEYCTVLLE+NA
Subjt:  ETVDIIRNVMEFVNDQLK-------------DKYDAKCMNQLQDILELSSGDRVRLMRIIMHSVQNMKAFLRIPNELKLEYCTVLLEDNA

A0A5A7UV97 Retrotransposon protein2.7e-2065.22Show/hide
Query:  MVETVDIIRNVMEFVNDQLK-------------DKYDAKCMNQLQDILELSSGDRVRLMRIIMHSVQNMKAFLRIPNELKLEYCTVLLEDNA
        M ETV++I N MEFVND+LK             DKY  + + QLQDI EL+S DRVRLM+IIMHSV +MKAFLRIP ELKLEYCTVLLEDNA
Subjt:  MVETVDIIRNVMEFVNDQLK-------------DKYDAKCMNQLQDILELSSGDRVRLMRIIMHSVQNMKAFLRIPNELKLEYCTVLLEDNA

A0A5A7VIQ2 Retrotransposon protein6.4e-1453.33Show/hide
Query:  ETVDIIRNVMEFVNDQLK-------------DKYDAKCMNQLQDILELSSGDRVRLMRIIMHSVQNMKAFLRIPNELKLEYCTVLLEDNA
        ETV II N +E+ N QLK             D   A+ M+QLQ I +LS+ DRVRL+ IIMH+V NM+AFL +P+ELKL+YCT +LEDNA
Subjt:  ETVDIIRNVMEFVNDQLK-------------DKYDAKCMNQLQDILELSSGDRVRLMRIIMHSVQNMKAFLRIPNELKLEYCTVLLEDNA

A0A5D3C5I7 Retrotransposon protein6.4e-1453.33Show/hide
Query:  ETVDIIRNVMEFVNDQLK-------------DKYDAKCMNQLQDILELSSGDRVRLMRIIMHSVQNMKAFLRIPNELKLEYCTVLLEDNA
        ETV II N +E+ N QLK             D   A+ M+QLQ I +LS+ DRVRL+ IIMH+V NM+AFL +P+ELKL+YCT +LEDNA
Subjt:  ETVDIIRNVMEFVNDQLK-------------DKYDAKCMNQLQDILELSSGDRVRLMRIIMHSVQNMKAFLRIPNELKLEYCTVLLEDNA

A0A5D3CT52 Retrotransposon protein2.3e-1148.86Show/hide
Query:  ETVDIIRNVMEFVNDQLKD-------------KYDAKCMNQLQDILELSSGDRVRLMRIIMHSVQNMKAFLRIPNELKLEYCTVLLED
        ETV++IR+ MEF NDQLK              +  A+ + QLQ+ILEL S DR +LM+I+ HSV+ ++ FL IP ELKLEYC +LL++
Subjt:  ETVDIIRNVMEFVNDQLKD-------------KYDAKCMNQLQDILELSSGDRVRLMRIIMHSVQNMKAFLRIPNELKLEYCTVLLED

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTTGAAACTGTCGACATTATTCGCAATGTAATGGAATTTGTGAATGACCAATTGAAGGACAAGTACGATGCTAAATGCATGAACCAGTTACAAGATATCCTTGAATT
AAGTAGTGGTGATAGGGTGCGGCTTATGCGAATCATAATGCACAGTGTCCAAAACATGAAAGCATTCTTGAGGATACCTAACGAGCTGAAATTGGAGTATTGCACCGTAC
TGCTAGAAGATAACGCTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGTTGAAACTGTCGACATTATTCGCAATGTAATGGAATTTGTGAATGACCAATTGAAGGACAAGTACGATGCTAAATGCATGAACCAGTTACAAGATATCCTTGAATT
AAGTAGTGGTGATAGGGTGCGGCTTATGCGAATCATAATGCACAGTGTCCAAAACATGAAAGCATTCTTGAGGATACCTAACGAGCTGAAATTGGAGTATTGCACCGTAC
TGCTAGAAGATAACGCTTGA
Protein sequenceShow/hide protein sequence
MVETVDIIRNVMEFVNDQLKDKYDAKCMNQLQDILELSSGDRVRLMRIIMHSVQNMKAFLRIPNELKLEYCTVLLEDNA