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IVF0003115 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0003115
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionScarecrow-like protein 5-like isoform X1
Genome locationchr06:22989843..22991690
RNA-Seq ExpressionIVF0003115
SyntenyIVF0003115
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR014900 - Viral late gene transcription factor 3 , zinc ribbon


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004149576.1 uncharacterized protein LOC101220311 [Cucumis sativus]5.47e-7990.55Show/hide
Query:  MEALISNPLITHPTLRLRRSTTFPLKPRSNSMHNRRRTPAFAAIDGASSLAADSTQVEITWQIFVGAIAGVTPFVVAGIEFSKRIMAQKRCKECGGSGLV
        MEAL+SNPLITHPTL    STTFPLKPRSNS+HNRRRTPAFAAIDGAS L ADSTQV+ITWQIFVGAIAGVTPFVVAGIEFSKRI  QKRCKECGGSGLV
Subjt:  MEALISNPLITHPTLRLRRSTTFPLKPRSNSMHNRRRTPAFAAIDGASSLAADSTQVEITWQIFVGAIAGVTPFVVAGIEFSKRIMAQKRCKECGGSGLV

Query:  LRDDDYFRCPDCGGFLPWQSWRRFFWG
        LRDDDYFRCP+CGGFLPWQSWRRFFWG
Subjt:  LRDDDYFRCPDCGGFLPWQSWRRFFWG

XP_008449071.1 PREDICTED: uncharacterized protein LOC103491051 [Cucumis melo]1.14e-7994.49Show/hide
Query:  MEALISNPLITHPTLRLRRSTTFPLKPRSNSMHNRRRTPAFAAIDGASSLAADSTQVEITWQIFVGAIAGVTPFVVAGIEFSKRIMAQKRCKECGGSGLV
        MEALISNPLITHPTLR  RS     KPRSNSMHNRRRTPAFAAIDGASSLAADSTQVEITWQIFVGAIAGVTPFVVAGIEFSKRIMAQKRCKECGGSGLV
Subjt:  MEALISNPLITHPTLRLRRSTTFPLKPRSNSMHNRRRTPAFAAIDGASSLAADSTQVEITWQIFVGAIAGVTPFVVAGIEFSKRIMAQKRCKECGGSGLV

Query:  LRDDDYFRCPDCGGFLPWQSWRRFFWG
        LRDDDYFRCPDCGGFLPWQSWRRFFWG
Subjt:  LRDDDYFRCPDCGGFLPWQSWRRFFWG

XP_022935718.1 uncharacterized protein LOC111442262 [Cucurbita moschata]8.00e-5873.13Show/hide
Query:  MEALI---SNPLITHPTLRL--RRSTTFPLKPRSNSMHNRRRTPAFAAIDGAS--SLAADSTQVEITWQIFVGAIAGVTPFVVAGIEFSKRIMAQKRCKE
        MEAL+   ++P    PT     R  + FPL  RSNS++ RRRTP FAAIDGAS  + AAD TQVEITWQI VGAIAGVTPFVVAGIEFSKRI+AQKRCKE
Subjt:  MEALI---SNPLITHPTLRL--RRSTTFPLKPRSNSMHNRRRTPAFAAIDGAS--SLAADSTQVEITWQIFVGAIAGVTPFVVAGIEFSKRIMAQKRCKE

Query:  CGGSGLVLRDDDYFRCPDCGGFLPWQSWRRFFWG
        CGGSGLVL D DYFRCP+CGGFLPWQSWRRFF G
Subjt:  CGGSGLVLRDDDYFRCPDCGGFLPWQSWRRFFWG

XP_023005598.1 uncharacterized protein LOC111498537 [Cucurbita maxima]1.14e-5773.13Show/hide
Query:  MEALI---SNPLITHPTLRL--RRSTTFPLKPRSNSMHNRRRTPAFAAIDGAS--SLAADSTQVEITWQIFVGAIAGVTPFVVAGIEFSKRIMAQKRCKE
        MEAL+   ++P    PT     R  + FPL  RSNS++ RRRTP FAAIDGAS  + AAD TQVEITWQI VGAIAGVTPFVVAGIEFSKRI+AQKRCKE
Subjt:  MEALI---SNPLITHPTLRL--RRSTTFPLKPRSNSMHNRRRTPAFAAIDGAS--SLAADSTQVEITWQIFVGAIAGVTPFVVAGIEFSKRIMAQKRCKE

Query:  CGGSGLVLRDDDYFRCPDCGGFLPWQSWRRFFWG
        CGGSGLVL D DYFRCP+CGGFLPWQSWRRFF G
Subjt:  CGGSGLVLRDDDYFRCPDCGGFLPWQSWRRFFWG

XP_038903334.1 uncharacterized protein LOC120089955 [Benincasa hispida]1.56e-6984.25Show/hide
Query:  MEALISNPLITHPTLRLRRSTTFPLKPRSNSMHNRRRTPAFAAIDGASSLAADSTQVEITWQIFVGAIAGVTPFVVAGIEFSKRIMAQKRCKECGGSGLV
        MEAL   P I++P    RRS+TFPLKPRSNS+ NRRRT  +AAIDGAS L ADS QVEITWQIFVGAIAGVTPFVVAGIEFSKRIMAQKRCKECGGSGLV
Subjt:  MEALISNPLITHPTLRLRRSTTFPLKPRSNSMHNRRRTPAFAAIDGASSLAADSTQVEITWQIFVGAIAGVTPFVVAGIEFSKRIMAQKRCKECGGSGLV

Query:  LRDDDYFRCPDCGGFLPWQSWRRFFWG
        LRDDDYFRCP+CGGFLPWQSWRRFFWG
Subjt:  LRDDDYFRCPDCGGFLPWQSWRRFFWG

TrEMBL top hitse value%identityAlignment
A0A0A0L7H1 Uncharacterized protein2.1e-5990.55Show/hide
Query:  MEALISNPLITHPTLRLRRSTTFPLKPRSNSMHNRRRTPAFAAIDGASSLAADSTQVEITWQIFVGAIAGVTPFVVAGIEFSKRIMAQKRCKECGGSGLV
        MEAL+SNPLITHPT  L  STTFPLKPRSNS+HNRRRTPAFAAIDGAS L ADSTQV+ITWQIFVGAIAGVTPFVVAGIEFSKRI  QKRCKECGGSGLV
Subjt:  MEALISNPLITHPTLRLRRSTTFPLKPRSNSMHNRRRTPAFAAIDGASSLAADSTQVEITWQIFVGAIAGVTPFVVAGIEFSKRIMAQKRCKECGGSGLV

Query:  LRDDDYFRCPDCGGFLPWQSWRRFFWG
        LRDDDYFRCP+CGGFLPWQSWRRFFWG
Subjt:  LRDDDYFRCPDCGGFLPWQSWRRFFWG

A0A1S3BLU9 uncharacterized protein LOC1034910517.2e-6094.49Show/hide
Query:  MEALISNPLITHPTLRLRRSTTFPLKPRSNSMHNRRRTPAFAAIDGASSLAADSTQVEITWQIFVGAIAGVTPFVVAGIEFSKRIMAQKRCKECGGSGLV
        MEALISNPLITHPT  LRRS     KPRSNSMHNRRRTPAFAAIDGASSLAADSTQVEITWQIFVGAIAGVTPFVVAGIEFSKRIMAQKRCKECGGSGLV
Subjt:  MEALISNPLITHPTLRLRRSTTFPLKPRSNSMHNRRRTPAFAAIDGASSLAADSTQVEITWQIFVGAIAGVTPFVVAGIEFSKRIMAQKRCKECGGSGLV

Query:  LRDDDYFRCPDCGGFLPWQSWRRFFWG
        LRDDDYFRCPDCGGFLPWQSWRRFFWG
Subjt:  LRDDDYFRCPDCGGFLPWQSWRRFFWG

A0A6J1DN65 uncharacterized protein LOC1110221353.6e-3574.75Show/hide
Query:  NSMHNRRRTPAFAAI-DGASSLAADSTQVEITWQIFVGAIAGVTPFVVAGIEFSKRIMAQKRCKECGGSGLVLRDDDYFRCPDCGGFLPWQSWRRFFWG
        NS+ NRR     AAI D AS   AD +Q++ITWQI VGAIAGVTPFVVAGIEF+KRI+AQ+RC+ECGGSGLVL +DDYFRCP CGGFLPWQSW+RFFWG
Subjt:  NSMHNRRRTPAFAAI-DGASSLAADSTQVEITWQIFVGAIAGVTPFVVAGIEFSKRIMAQKRCKECGGSGLVLRDDDYFRCPDCGGFLPWQSWRRFFWG

A0A6J1FBA7 uncharacterized protein LOC1114422622.1e-4373.13Show/hide
Query:  MEALI---SNPLITHPTLRL--RRSTTFPLKPRSNSMHNRRRTPAFAAIDGAS--SLAADSTQVEITWQIFVGAIAGVTPFVVAGIEFSKRIMAQKRCKE
        MEAL+   ++P    PT     R  + FPL  RSNS++ RRRTP FAAIDGAS  + AAD TQVEITWQI VGAIAGVTPFVVAGIEFSKRI+AQKRCKE
Subjt:  MEALI---SNPLITHPTLRL--RRSTTFPLKPRSNSMHNRRRTPAFAAIDGAS--SLAADSTQVEITWQIFVGAIAGVTPFVVAGIEFSKRIMAQKRCKE

Query:  CGGSGLVLRDDDYFRCPDCGGFLPWQSWRRFFWG
        CGGSGLVL D DYFRCP+CGGFLPWQSWRRFF G
Subjt:  CGGSGLVLRDDDYFRCPDCGGFLPWQSWRRFFWG

A0A6J1L2M2 uncharacterized protein LOC1114985372.8e-4373.13Show/hide
Query:  MEALI---SNPLITHPTLRL--RRSTTFPLKPRSNSMHNRRRTPAFAAIDGAS--SLAADSTQVEITWQIFVGAIAGVTPFVVAGIEFSKRIMAQKRCKE
        MEAL+   ++P    PT     R  + FPL  RSNS++ RRRTP FAAIDGAS  + AAD TQVEITWQI VGAIAGVTPFVVAGIEFSKRI+AQKRCKE
Subjt:  MEALI---SNPLITHPTLRL--RRSTTFPLKPRSNSMHNRRRTPAFAAIDGAS--SLAADSTQVEITWQIFVGAIAGVTPFVVAGIEFSKRIMAQKRCKE

Query:  CGGSGLVLRDDDYFRCPDCGGFLPWQSWRRFFWG
        CGGSGLVL D DYFRCP+CGGFLPWQSWRRFF G
Subjt:  CGGSGLVLRDDDYFRCPDCGGFLPWQSWRRFFWG

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT5G55570.1 unknown protein1.3e-3264.89Show/hide
Query:  NRRRTPAFAAIDGASSLAADSTQVEITWQIFVGAIAGVTPFVVAGIEFSKRIMAQKRCKECGGSGLVLRDDDYFRCPDCGGFLPWQSWRRFFWG
        + RR    +A+   +   A++ + EITWQI VG IAG+ PFVVAG+EFSKRI+AQKRC+ECGG+GLV RD  YFRCP+CGGFLPWQSWRRFF G
Subjt:  NRRRTPAFAAIDGASSLAADSTQVEITWQIFVGAIAGVTPFVVAGIEFSKRIMAQKRCKECGGSGLVLRDDDYFRCPDCGGFLPWQSWRRFFWG


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAAGCATTAATTTCCAACCCTCTTATTACCCATCCCACTCTTCGTCTTCGTCGTTCCACTACTTTTCCCCTCAAACCGCGCTCGAATTCGATGCATAATCGAAGACG
AACACCCGCGTTTGCCGCCATTGACGGTGCTTCTTCGCTTGCAGCTGACTCCACTCAGGTTGAAATCACATGGCAAATTTTCGTTGGAGCGATTGCTGGAGTGACGCCAT
TTGTGGTGGCCGGAATCGAATTCAGCAAGAGAATTATGGCGCAAAAGAGATGTAAAGAATGCGGTGGTTCCGGGCTAGTTCTTAGAGATGATGACTACTTTCGTTGCCCG
GACTGTGGTGGTTTTTTGCCATGGCAGTCATGGAGGCGATTCTTTTGGGGATAA
mRNA sequenceShow/hide mRNA sequence
CATCTTTACAACAACATCCTAATCTTTGGGATATTTACATTTCAATAAACTAATCAATACCCACAAGTAAGTTTGTGGTTGTAGCGAACTGGATTGAAAACCCATCCACT
CGAATCACTACCTTCTCTATTTCCCTCATTCTCTCTTCCTTCATCCTTCTCCAACCCAATCATGGAAGCATTAATTTCCAACCCTCTTATTACCCATCCCACTCTTCGTC
TTCGTCGTTCCACTACTTTTCCCCTCAAACCGCGCTCGAATTCGATGCATAATCGAAGACGAACACCCGCGTTTGCCGCCATTGACGGTGCTTCTTCGCTTGCAGCTGAC
TCCACTCAGGTTGAAATCACATGGCAAATTTTCGTTGGAGCGATTGCTGGAGTGACGCCATTTGTGGTGGCCGGAATCGAATTCAGCAAGAGAATTATGGCGCAAAAGAG
ATGTAAAGAATGCGGTGGTTCCGGGCTAGTTCTTAGAGATGATGACTACTTTCGTTGCCCGGACTGTGGTGGTTTTTTGCCATGGCAGTCATGGAGGCGATTCTTTTGGG
GATAAAGAAGACACTTAACAAGATATGTCTCTTTTGAAGCTGTATTAATTACACTCATATTTCAAAGAAAGTGGTTCAGGATTTTCTTCGTTGATTTCCAAGCAAGACGA
GGAACAAAGGATCTGATCTTATCCGTTCATTAAGTGTATGCATTTGAGGTTAGAGCTAATTACAAGTTCACCACGTTTCTCATCAAATTACAAGCTCAATCAAGTATTCA
AATGTTGCTAAATGATTGTTTACGAGGTTACATTTCTAGCATGTCGTTCTTGAAATGTCATTTTCTCTCACATAGTTAATAACATGTATAAAAGATTTAATATTTTTTAA
CCTATCAACTTTAGTTTTTAAGTCAGGTACTGGTTTATTTATACAATAAAGCTAGGCATTTCTTCCCAGTGCTTGAGATGTGCAGAGCCAAGCATGTTGAATTAGAAACT
CCATTAATTTGTATTAAGTGGGATATTGCGAAACAAATTACGCACGTCCATTTTGGTGTTTATGCATTTGTATATAACTCACGG
Protein sequenceShow/hide protein sequence
MEALISNPLITHPTLRLRRSTTFPLKPRSNSMHNRRRTPAFAAIDGASSLAADSTQVEITWQIFVGAIAGVTPFVVAGIEFSKRIMAQKRCKECGGSGLVLRDDDYFRCP
DCGGFLPWQSWRRFFWG