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IVF0003175 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0003175
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionS-protein homolog
Genome locationchr12:24719587..24720036
RNA-Seq ExpressionIVF0003175
SyntenyIVF0003175
Gene Ontology termsNA
InterPro domainsIPR010264 - Plant self-incompatibility S1


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022137291.1 S-protein homolog 1-like [Momordica charantia]6.70e-3753.39Show/hide
Query:  QLPFSEWKVTITNNIADS-NLVVHCKSKDNDLGKQVIKQGGKYFWTFKENLWSTTLFWCNFKSKYGKVSGEVFWPENGSRLTDQCVKNNCVWFVQVG-GV
        Q P S W+VTI N +  S NL VHCKSKD+DLG+ VI+  G+Y W FKEN W TTLFWCNFKS YG  SGEVFWPE    L  +C  +NC+W  +   G+
Subjt:  QLPFSEWKVTITNNIADS-NLVVHCKSKDNDLGKQVIKQGGKYFWTFKENLWSTTLFWCNFKSKYGKVSGEVFWPENGSRLTDQCVKNNCVWFVQVG-GV

Query:  FLYSHHPSKVYHTKYTWK
        +L +H P + +  KY W+
Subjt:  FLYSHHPSKVYHTKYTWK

XP_022954425.1 S-protein homolog 74-like [Cucurbita moschata]4.70e-3850.79Show/hide
Query:  SCLAQSSKVQLP-FSEWKVTITNNIADSNLVVHCKSKDNDLGKQVIKQGGKYFWTFKENLWSTTLFWCNFKSKYGKVSGEVFWPENGSRLTDQCVKNNCV
        SC AQS    +  FS W+V I N++ DS LVVHCKSKD+DLG+ VIK G KYFW F EN+  TTL+WCNF SK G+ SG+VFWPE    L+D+C +N C+
Subjt:  SCLAQSSKVQLP-FSEWKVTITNNIADSNLVVHCKSKDNDLGKQVIKQGGKYFWTFKENLWSTTLFWCNFKSKYGKVSGEVFWPENGSRLTDQCVKNNCV

Query:  WFVQVGGVFLYSHHPSKVYHTKYTWK
        W  +  G+ +       +Y   Y WK
Subjt:  WFVQVGGVFLYSHHPSKVYHTKYTWK

XP_022954429.1 S-protein homolog 74-like [Cucurbita moschata]2.70e-3750Show/hide
Query:  SCLAQSSKVQLP-FSEWKVTITNNIADSNLVVHCKSKDNDLGKQVIKQGGKYFWTFKENLWSTTLFWCNFKSKYGKVSGEVFWPENGSRLTDQCVKNNCV
        SC AQS    +  FS W+V I N++ DS LV HCKSKD+DLG+ VIK G KYFW F EN+  TTL+WCNF SK G+ SG+VFWPE    L+D+C +N C+
Subjt:  SCLAQSSKVQLP-FSEWKVTITNNIADSNLVVHCKSKDNDLGKQVIKQGGKYFWTFKENLWSTTLFWCNFKSKYGKVSGEVFWPENGSRLTDQCVKNNCV

Query:  WFVQVGGVFLYSHHPSKVYHTKYTWK
        W  +  G+ +       +Y   Y WK
Subjt:  WFVQVGGVFLYSHHPSKVYHTKYTWK

XP_023001658.1 S-protein homolog 74-like [Cucurbita maxima]1.13e-5259.44Show/hide
Query:  LCIVLLVGLESNKYS--CLAQ--SSKVQLPFSEWKVTITNNIADSNLVVHCKSKDNDLGKQVIKQGGKYFWTFKENLWSTTLFWCNFKSKYGKVSGEVFW
        LC +LL+GL SN     C AQ   SKVQLPFS W+VTI N++ DS L+VHCKSKDNDLG+  IKQG  YF  FKEN+W TT FWC+F SKYG+V+G+VFW
Subjt:  LCIVLLVGLESNKYS--CLAQ--SSKVQLPFSEWKVTITNNIADSNLVVHCKSKDNDLGKQVIKQGGKYFWTFKENLWSTTLFWCNFKSKYGKVSGEVFW

Query:  PENGSRLTDQCVKNNCVWFVQVGGVFLYSHHPSKVYHTKYTWK
        PE GSRL+D+C  +NCVW  Q GG+FL     +  Y   Y WK
Subjt:  PENGSRLTDQCVKNNCVWFVQVGGVFLYSHHPSKVYHTKYTWK

XP_023522257.1 S-protein homolog 1-like, partial [Cucurbita pepo subsp. pepo]5.04e-4257.27Show/hide
Query:  SCLAQS-SKVQLPFSEWKVTITNNIADSNLVVHCKSKDNDLGKQVIKQGGKYFWTFKENLWSTTLFWCNFKSKYGKVSGEVFWPENGSRLTDQCVKNNCV
        SC AQS SK Q P S W+V I N++ DS L+ HCKSK++DLG+ VI  GGKY+W F EN+W +TLFWCNF SK+G+ SGEVFWP+NG  L D+C  N C+
Subjt:  SCLAQS-SKVQLPFSEWKVTITNNIADSNLVVHCKSKDNDLGKQVIKQGGKYFWTFKENLWSTTLFWCNFKSKYGKVSGEVFWPENGSRLTDQCVKNNCV

Query:  WFVQVGGVFL
        W  +  G+ L
Subjt:  WFVQVGGVFL

TrEMBL top hitse value%identityAlignment
A0A6J1C659 S-protein homolog7.8e-2952.14Show/hide
Query:  QLPFSEWKVTITNNIADS-NLVVHCKSKDNDLGKQVIKQGGKYFWTFKENLWSTTLFWCNFKSKYGKVSGEVFWPENGSRLTDQCVKNNCVWFVQVGGVF
        Q P S W+VTI N +  S NL VHCKSKD+DLG+ VI+  G+Y W FKEN W TTLFWCNFKS YG  SGEVFWPE    L  +C  +NC+W  +     
Subjt:  QLPFSEWKVTITNNIADS-NLVVHCKSKDNDLGKQVIKQGGKYFWTFKENLWSTTLFWCNFKSKYGKVSGEVFWPENGSRLTDQCVKNNCVWFVQVGGVF

Query:  LYSHHPSKVYHTKYTWK
          +H P + +  KY W+
Subjt:  LYSHHPSKVYHTKYTWK

A0A6J1GQZ0 S-protein homolog2.3e-2850Show/hide
Query:  SCLAQS-SKVQLPFSEWKVTITNNIADSNLVVHCKSKDNDLGKQVIKQGGKYFWTFKENLWSTTLFWCNFKSKYGKVSGEVFWPENGSRLTDQCVKNNCV
        SC AQS S +   FS W+V I N++ DS LV HCKSKD+DLG+ VIK G KYFW F EN+  TTL+WCNF SK G+  G+VFWPE    L+D+C +N C+
Subjt:  SCLAQS-SKVQLPFSEWKVTITNNIADSNLVVHCKSKDNDLGKQVIKQGGKYFWTFKENLWSTTLFWCNFKSKYGKVSGEVFWPENGSRLTDQCVKNNCV

Query:  WFVQVGGVFLYSHHPSKVYHTKYTWK
        W  +  G+ +       +Y   Y WK
Subjt:  WFVQVGGVFLYSHHPSKVYHTKYTWK

A0A6J1GSD6 S-protein homolog9.2e-3051.59Show/hide
Query:  SCLAQS-SKVQLPFSEWKVTITNNIADSNLVVHCKSKDNDLGKQVIKQGGKYFWTFKENLWSTTLFWCNFKSKYGKVSGEVFWPENGSRLTDQCVKNNCV
        SC AQS S +   FS W+V I N++ DS LVVHCKSKD+DLG+ VIK G KYFW F EN+  TTL+WCNF SK G+ SG+VFWPE    L+D+C +N C+
Subjt:  SCLAQS-SKVQLPFSEWKVTITNNIADSNLVVHCKSKDNDLGKQVIKQGGKYFWTFKENLWSTTLFWCNFKSKYGKVSGEVFWPENGSRLTDQCVKNNCV

Query:  WFVQVGGVFLYSHHPSKVYHTKYTWK
        W  +  G+ +       +Y   Y WK
Subjt:  WFVQVGGVFLYSHHPSKVYHTKYTWK

A0A6J1GSZ3 S-protein homolog3.5e-2950.79Show/hide
Query:  SCLAQS-SKVQLPFSEWKVTITNNIADSNLVVHCKSKDNDLGKQVIKQGGKYFWTFKENLWSTTLFWCNFKSKYGKVSGEVFWPENGSRLTDQCVKNNCV
        SC AQS S +   FS W+V I N++ DS LV HCKSKD+DLG+ VIK G KYFW F EN+  TTL+WCNF SK G+ SG+VFWPE    L+D+C +N C+
Subjt:  SCLAQS-SKVQLPFSEWKVTITNNIADSNLVVHCKSKDNDLGKQVIKQGGKYFWTFKENLWSTTLFWCNFKSKYGKVSGEVFWPENGSRLTDQCVKNNCV

Query:  WFVQVGGVFLYSHHPSKVYHTKYTWK
        W  +  G+ +       +Y   Y WK
Subjt:  WFVQVGGVFLYSHHPSKVYHTKYTWK

A0A6J1KR58 S-protein homolog3.0e-4159.44Show/hide
Query:  LCIVLLVGLESNKY--SCLAQ--SSKVQLPFSEWKVTITNNIADSNLVVHCKSKDNDLGKQVIKQGGKYFWTFKENLWSTTLFWCNFKSKYGKVSGEVFW
        LC +LL+GL SN     C AQ   SKVQLPFS W+VTI N++ DS L+VHCKSKDNDLG+  IKQG  YF  FKEN+W TT FWC+F SKYG+V+G+VFW
Subjt:  LCIVLLVGLESNKY--SCLAQ--SSKVQLPFSEWKVTITNNIADSNLVVHCKSKDNDLGKQVIKQGGKYFWTFKENLWSTTLFWCNFKSKYGKVSGEVFW

Query:  PENGSRLTDQCVKNNCVWFVQVGGVFLYSHHPSKVYHTKYTWK
        PE GSRL+D+C  +NCVW  Q GG+FL     +  Y   Y WK
Subjt:  PENGSRLTDQCVKNNCVWFVQVGGVFLYSHHPSKVYHTKYTWK

SwissProt top hitse value%identityAlignment
F2Q9V4 S-protein homolog 62.3e-0931.06Show/hide
Query:  ILLCIVLLVGLESNKYSCLAQSSKVQLPFSEWKVTITNNIADSNLVVHCKSKDNDLGKQVIKQGGKYFWTFKENLWSTTLFWCNFKSKYGKVSGEVFWPE
        I + ++ L+G E+ ++       K  L     +V I N+  D  L VHCKS+D+D G  ++++GG Y W F  N  ++TL++C F  +  +V   VF   
Subjt:  ILLCIVLLVGLESNKYSCLAQSSKVQLPFSEWKVTITNNIADSNLVVHCKSKDNDLGKQVIKQGGKYFWTFKENLWSTTLFWCNFKSKYGKVSGEVFWPE

Query:  NGSRLTDQCVKNNCVWFVQVGGVFLYSHHPSK
           R + +C   NC W  +  G++ Y   P K
Subjt:  NGSRLTDQCVKNNCVWFVQVGGVFLYSHHPSK

F4JLS0 S-protein homolog 11.8e-1435.35Show/hide
Query:  SEWKVTITNNI-ADSNLVVHCKSKDNDLGKQVIKQGGKYFWTFKENLWSTTLFWCNFKSKYGKVSGEVFWPENGSRLTDQCVKNNCVWFVQVGGVFLYS
        SEW+VT+ N +     L +HCKSK++DLG+  +K   ++ W F EN+  +T FWC      G ++  VFW +    L  +C   NC+W  +  G++L++
Subjt:  SEWKVTITNNI-ADSNLVVHCKSKDNDLGKQVIKQGGKYFWTFKENLWSTTLFWCNFKSKYGKVSGEVFWPENGSRLTDQCVKNNCVWFVQVGGVFLYS

P0DN92 S-protein homolog 241.3e-0930.14Show/hide
Query:  VNILLCIVLLVGLESNKYSC----LAQSSKVQLPFSEWKVTITNNIADSNLVVHCKSKDNDLGKQVIKQGGKYFWTFKENLWSTTLFWCNFKSKYGKVSG
        +N   C + +V +      C      Q +K  +     +VTI N+  D  L +HCKS+D+DLG  ++ +G  + W F  N   +TL++C F    G++  
Subjt:  VNILLCIVLLVGLESNKYSC----LAQSSKVQLPFSEWKVTITNNIADSNLVVHCKSKDNDLGKQVIKQGGKYFWTFKENLWSTTLFWCNFKSKYGKVSG

Query:  EVFWPENGSRLTDQCVKNNCVWFVQVGGVFLYSHHPSKVYHTKYTW
         VF     +R   +C   NC W  +  G++ YS  P K Y   Y W
Subjt:  EVFWPENGSRLTDQCVKNNCVWFVQVGGVFLYSHHPSKVYHTKYTW

Q2HQ46 S-protein homolog 741.4e-1431.78Show/hide
Query:  ILLCIVLLVGLESNKYSCLAQSSKVQLP-FSEWKVTITNNI-ADSNLVVHCKSKDNDLGKQVIKQGGKYFWTFKENLWSTTLFWCNFKSKYGKVSGEVFW
        + +C  L++  + +  +    +  + +P  SEW+VT+ N +     L +HCKSK+NDLG   +K   ++ W F EN+  +TLFWC      G ++ +VFW
Subjt:  ILLCIVLLVGLESNKYSCLAQSSKVQLP-FSEWKVTITNNI-ADSNLVVHCKSKDNDLGKQVIKQGGKYFWTFKENLWSTTLFWCNFKSKYGKVSGEVFW

Query:  PENGSRLTDQCVKNNCVWFVQVGGVFLYS
         +    L  +C   NCVW  +  G++L++
Subjt:  PENGSRLTDQCVKNNCVWFVQVGGVFLYS

Q9FI84 S-protein homolog 271.0e-0935.64Show/hide
Query:  KVTITNNIADSNLVVHCKSKDNDLGKQVIKQGGKYFWTFKENLWSTTLFWCNFKSKYGKVSGEVFWPENGSRLTDQCVKNNCVWFVQVGGVFLYSHHPSK
        ++T+ NN  D  L +HCKSKD+DLG  + K+G  Y W F  N  ++TL++C F    G+ +  VF  +   R   +C   NC W  +   ++ YS+ P  
Subjt:  KVTITNNIADSNLVVHCKSKDNDLGKQVIKQGGKYFWTFKENLWSTTLFWCNFKSKYGKVSGEVFWPENGSRLTDQCVKNNCVWFVQVGGVFLYSHHPSK

Query:  V
        V
Subjt:  V

Arabidopsis top hitse value%identityAlignment
AT1G04645.1 Plant self-incompatibility protein S1 family4.7e-1034.83Show/hide
Query:  VTITNNIADSNLVVHCKSKDNDLGKQVIKQGGKYFWTFKENLWSTTLFWCNFKSKYGKVSGEVFWPENGSRLTDQCVKNNCVWFVQVGG
        VT+TN I    L +HCKSK +DLG  V+    +Y + F+ NLW +TLF+C+F+      S +++  +      DQ + ++C W ++  G
Subjt:  VTITNNIADSNLVVHCKSKDNDLGKQVIKQGGKYFWTFKENLWSTTLFWCNFKSKYGKVSGEVFWPENGSRLTDQCVKNNCVWFVQVGG

AT4G16295.1 S-protein homologue 11.3e-1535.35Show/hide
Query:  SEWKVTITNNI-ADSNLVVHCKSKDNDLGKQVIKQGGKYFWTFKENLWSTTLFWCNFKSKYGKVSGEVFWPENGSRLTDQCVKNNCVWFVQVGGVFLYS
        SEW+VT+ N +     L +HCKSK++DLG+  +K   ++ W F EN+  +T FWC      G ++  VFW +    L  +C   NC+W  +  G++L++
Subjt:  SEWKVTITNNI-ADSNLVVHCKSKDNDLGKQVIKQGGKYFWTFKENLWSTTLFWCNFKSKYGKVSGEVFWPENGSRLTDQCVKNNCVWFVQVGGVFLYS

AT4G29035.1 Plant self-incompatibility protein S1 family9.7e-1631.78Show/hide
Query:  ILLCIVLLVGLESNKYSCLAQSSKVQLP-FSEWKVTITNNI-ADSNLVVHCKSKDNDLGKQVIKQGGKYFWTFKENLWSTTLFWCNFKSKYGKVSGEVFW
        + +C  L++  + +  +    +  + +P  SEW+VT+ N +     L +HCKSK+NDLG   +K   ++ W F EN+  +TLFWC      G ++ +VFW
Subjt:  ILLCIVLLVGLESNKYSCLAQSSKVQLP-FSEWKVTITNNI-ADSNLVVHCKSKDNDLGKQVIKQGGKYFWTFKENLWSTTLFWCNFKSKYGKVSGEVFW

Query:  PENGSRLTDQCVKNNCVWFVQVGGVFLYS
         +    L  +C   NCVW  +  G++L++
Subjt:  PENGSRLTDQCVKNNCVWFVQVGGVFLYS

AT5G04350.1 Plant self-incompatibility protein S1 family4.2e-1129.94Show/hide
Query:  VNILLCIVLLVGLESNKYSCLAQSSKVQLPFSEWKVTITNNIADSNLV-VHCKSKDNDLGKQVIKQGGKYFWTFKENLWSTTLFWC------NFKSKYGK
        +N L    +++GL      C+  S+       E KV ++N +  S L+ VHC+SKD+DLG+ ++K G  Y +TF +N+W TT F C      NFK     
Subjt:  VNILLCIVLLVGLESNKYSCLAQSSKVQLPFSEWKVTITNNIADSNLV-VHCKSKDNDLGKQVIKQGGKYFWTFKENLWSTTLFWC------NFKSKYGK

Query:  VSGEVFWPENGSRLTDQCVKNNCVWFVQVGGVFLYSH--HPSKVYH------TKYTW
        V+ E  W         + ++ +C W  +  G++       P+K Y        KY W
Subjt:  VSGEVFWPENGSRLTDQCVKNNCVWFVQVGGVFLYSH--HPSKVYH------TKYTW

AT5G06020.1 Plant self-incompatibility protein S1 family7.2e-1135.64Show/hide
Query:  KVTITNNIADSNLVVHCKSKDNDLGKQVIKQGGKYFWTFKENLWSTTLFWCNFKSKYGKVSGEVFWPENGSRLTDQCVKNNCVWFVQVGGVFLYSHHPSK
        ++T+ NN  D  L +HCKSKD+DLG  + K+G  Y W F  N  ++TL++C F    G+ +  VF  +   R   +C   NC W  +   ++ YS+ P  
Subjt:  KVTITNNIADSNLVVHCKSKDNDLGKQVIKQGGKYFWTFKENLWSTTLFWCNFKSKYGKVSGEVFWPENGSRLTDQCVKNNCVWFVQVGGVFLYSHHPSK

Query:  V
        V
Subjt:  V


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAGAAGAAGTCTGCTGTAAACATACTTTTATGTATTGTGTTATTGGTTGGTTTGGAATCAAACAAGTACTCATGTTTAGCACAATCATCAAAGGTACAACTTCCATT
CTCTGAGTGGAAAGTGACGATTACGAATAACATAGCAGATTCAAACCTAGTGGTTCACTGCAAATCGAAAGACAACGATCTGGGGAAACAGGTAATAAAACAAGGAGGGA
AGTACTTCTGGACGTTTAAAGAAAATCTTTGGTCAACCACGTTGTTTTGGTGCAATTTTAAGAGCAAATATGGGAAAGTTTCTGGTGAGGTTTTCTGGCCGGAAAATGGA
AGCCGACTTACTGATCAATGTGTAAAAAATAATTGTGTTTGGTTTGTTCAAGTTGGTGGGGTTTTCTTGTATTCTCATCATCCTTCAAAGGTCTATCATACAAAGTACAC
TTGGAAGTAA
mRNA sequenceShow/hide mRNA sequence
ATGAAGAAGAAGTCTGCTGTAAACATACTTTTATGTATTGTGTTATTGGTTGGTTTGGAATCAAACAAGTACTCATGTTTAGCACAATCATCAAAGGTACAACTTCCATT
CTCTGAGTGGAAAGTGACGATTACGAATAACATAGCAGATTCAAACCTAGTGGTTCACTGCAAATCGAAAGACAACGATCTGGGGAAACAGGTAATAAAACAAGGAGGGA
AGTACTTCTGGACGTTTAAAGAAAATCTTTGGTCAACCACGTTGTTTTGGTGCAATTTTAAGAGCAAATATGGGAAAGTTTCTGGTGAGGTTTTCTGGCCGGAAAATGGA
AGCCGACTTACTGATCAATGTGTAAAAAATAATTGTGTTTGGTTTGTTCAAGTTGGTGGGGTTTTCTTGTATTCTCATCATCCTTCAAAGGTCTATCATACAAAGTACAC
TTGGAAGTAA
Protein sequenceShow/hide protein sequence
MKKKSAVNILLCIVLLVGLESNKYSCLAQSSKVQLPFSEWKVTITNNIADSNLVVHCKSKDNDLGKQVIKQGGKYFWTFKENLWSTTLFWCNFKSKYGKVSGEVFWPENG
SRLTDQCVKNNCVWFVQVGGVFLYSHHPSKVYHTKYTWK